| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is ycbL [C]
Identifier: 222525915
GI number: 222525915
Start: 3302697
End: 3303662
Strand: Reverse
Name: ycbL [C]
Synonym: Chy400_2670
Alternate gene names: 222525915
Gene position: 3303662-3302697 (Counterclockwise)
Preceding gene: 222525923
Following gene: 222525914
Centisome position: 62.7
GC content: 57.25
Gene sequence:
>966_bases ATGCTCACAACAATTTTACCCGATGTGTACCAGCTACGTCTGCCACTCCCCTTTGCCCTCAACCATGTTAATGTATATCT GCTCCGCGATCCACAGGGATGGACGGTCGTCGATACCGGCTTACATACACCCGCCGGCGAAGCTGCCTGGCAAGAGGCAT GGACTGCGCTCAACCTCGACCCGGCTCAGATTCATACAATTGTCTTGACCCATTTCCACCCTGATCACTTTGGGATGGCC GGCTGGCTCCATCACCATTCCGGTGCCCGGGTACTGCTGGCCCCACGGGAAATCGAACTGGCCCAGGAAGTCTGGGTACA GCGAGCCGATCACGACGACCCCAGTTTACGCCATTTTCTCCGTCATGGTATGCCCGCCGATCTGGTCGATAAAGTCGTCG GTGCCATTGCCGGATTGCGGGCTGCGACCCGACCGCACCCACCCCTGACCCCCCTGCCACCCGGTAGCCAGGTAACGATG GGGGGGCGTTCTTTTGTCGCTATTCATGCCCCTGGCCATAGTGATGGGCAGTTAATCTTCTACGCAGCCGATGAGCGGCT GGCTCTGGTTGGTGATCAGGTGCTACTCAAAATCACGCCTCATATTGGCGTCTGGCCGGAAAGTGAACCCGATCCGTTAC GGAAATATCTGGCCTCGCTGGCTGAACTGGCGACGCTGAAGGTCGATCTGGCCCTTCCCGGTCATGGCAAACCGATCACA GAGTGGAAGACGCGCATTAGTGAATTACAGGTGCATCACCACGAGCGATTAGCCGCTATGCTCGCCGCAGTGCGTAACGG TGCCGACACTGCCTTTGCCGTGGCGCAACGGGTATTCGATGTTGAGCGCTTCACCCCACACGAAGCTCGCTTTGCCATCG CTGAAACCATTGCCCACCTCGAAATGATGGTTGTCGATGGTTTACTGCAACGCCATGACGACGAACTGGTACGGTACACA CTGTAA
Upstream 100 bases:
>100_bases AAAATTATCCATACGTCAAACATCGCCTTGTCTAGTTCTTGTCGTATTATAATGCAAGCAGGATACCGCCAACGCGCTGC GTCATTCAGCAGGATTATGT
Downstream 100 bases:
>100_bases GACCACGTTCGCCAATCTGTAATCTACGCTCGTTAAGCGTACCTCAACGCATATGGTACCCTGCACATGCCATTCAGAAT GATGGCTATCGGCAAGGCGC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta Lactamase; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Zinc Metallohydrolase Glyoxalase II Family; Metallo-Beta-Lactamase; Metallo-Beta-Lactamase Family Hydrolase; Beta-Lactamase Class B; Zn-Dependent Hydrolases; Metallo-Beta-Lactamase Family Protein / Hydrolase; Metallo-Dependent Enzymatic Protein; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLTTILPDVYQLRLPLPFALNHVNVYLLRDPQGWTVVDTGLHTPAGEAAWQEAWTALNLDPAQIHTIVLTHFHPDHFGMA GWLHHHSGARVLLAPREIELAQEVWVQRADHDDPSLRHFLRHGMPADLVDKVVGAIAGLRAATRPHPPLTPLPPGSQVTM GGRSFVAIHAPGHSDGQLIFYAADERLALVGDQVLLKITPHIGVWPESEPDPLRKYLASLAELATLKVDLALPGHGKPIT EWKTRISELQVHHHERLAAMLAAVRNGADTAFAVAQRVFDVERFTPHEARFAIAETIAHLEMMVVDGLLQRHDDELVRYT L
Sequences:
>Translated_321_residues MLTTILPDVYQLRLPLPFALNHVNVYLLRDPQGWTVVDTGLHTPAGEAAWQEAWTALNLDPAQIHTIVLTHFHPDHFGMA GWLHHHSGARVLLAPREIELAQEVWVQRADHDDPSLRHFLRHGMPADLVDKVVGAIAGLRAATRPHPPLTPLPPGSQVTM GGRSFVAIHAPGHSDGQLIFYAADERLALVGDQVLLKITPHIGVWPESEPDPLRKYLASLAELATLKVDLALPGHGKPIT EWKTRISELQVHHHERLAAMLAAVRNGADTAFAVAQRVFDVERFTPHEARFAIAETIAHLEMMVVDGLLQRHDDELVRYT L >Mature_321_residues MLTTILPDVYQLRLPLPFALNHVNVYLLRDPQGWTVVDTGLHTPAGEAAWQEAWTALNLDPAQIHTIVLTHFHPDHFGMA GWLHHHSGARVLLAPREIELAQEVWVQRADHDDPSLRHFLRHGMPADLVDKVVGAIAGLRAATRPHPPLTPLPPGSQVTM GGRSFVAIHAPGHSDGQLIFYAADERLALVGDQVLLKITPHIGVWPESEPDPLRKYLASLAELATLKVDLALPGHGKPIT EWKTRISELQVHHHERLAAMLAAVRNGADTAFAVAQRVFDVERFTPHEARFAIAETIAHLEMMVVDGLLQRHDDELVRYT L
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35657; Mature: 35657
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTILPDVYQLRLPLPFALNHVNVYLLRDPQGWTVVDTGLHTPAGEAAWQEAWTALNLD CCCCCCCHHHHEECCCCEEECCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCC PAQIHTIVLTHFHPDHFGMAGWLHHHSGARVLLAPREIELAQEVWVQRADHDDPSLRHFL HHHEEEEEEEEECCCCCCCHHHEEECCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHH RHGMPADLVDKVVGAIAGLRAATRPHPPLTPLPPGSQVTMGGRSFVAIHAPGHSDGQLIF HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEE YAADERLALVGDQVLLKITPHIGVWPESEPDPLRKYLASLAELATLKVDLALPGHGKPIT EECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCHH EWKTRISELQVHHHERLAAMLAAVRNGADTAFAVAQRVFDVERFTPHEARFAIAETIAHL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EMMVVDGLLQRHDDELVRYTL HHHHHHHHHHHCCCHHHEECC >Mature Secondary Structure MLTTILPDVYQLRLPLPFALNHVNVYLLRDPQGWTVVDTGLHTPAGEAAWQEAWTALNLD CCCCCCCHHHHEECCCCEEECCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCC PAQIHTIVLTHFHPDHFGMAGWLHHHSGARVLLAPREIELAQEVWVQRADHDDPSLRHFL HHHEEEEEEEEECCCCCCCHHHEEECCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHH RHGMPADLVDKVVGAIAGLRAATRPHPPLTPLPPGSQVTMGGRSFVAIHAPGHSDGQLIF HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCCEEEE YAADERLALVGDQVLLKITPHIGVWPESEPDPLRKYLASLAELATLKVDLALPGHGKPIT EECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCHH EWKTRISELQVHHHERLAAMLAAVRNGADTAFAVAQRVFDVERFTPHEARFAIAETIAHL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EMMVVDGLLQRHDDELVRYTL HHHHHHHHHHHCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA