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The map label for this gene is ylbH [H]

Identifier: 222525835

GI number: 222525835

Start: 3224641

End: 3225219

Strand: Direct

Name: ylbH [H]

Synonym: Chy400_2588

Alternate gene names: 222525835

Gene position: 3224641-3225219 (Clockwise)

Preceding gene: 222525834

Following gene: 222525836

Centisome position: 61.2

GC content: 50.43

Gene sequence:

>579_bases
ATGCGAGTCATTACCGGCAAAGCTAAAGGGCATCGCTTAAAAGCACCGAAAGGACTGGGTACACGCCCGATGCTTGATCG
GGTAAAGGAAGCACTCTTTTCAGTGCTGGAAGGGTATGGCCCAATCCGTGGGTCGGTGCTCGATCTGTATGCTGGTACGG
GATCGCTCGGCATCGAATGTCTGTCACGTGGTGCTGATAGTGCTGATTTTGTCGAACGAAATGCCCATGTTTGCTCAATT
ATTGCCGATAACTTGCGGCATACTCGTTTCGAGCAGCAAGGCCATATCTACCATATGCCGGTAGATCGCTTTCTTCATCG
GCAGCGTGGCATTGGACGCTATGATATAATCATCATGGATCCTCCATACGCTGATCCGACAATCGAGGCGACAATGCAAC
TCGTTGCGAGCAGTGGCGTCGGCAAGGAAGGGAGCTTGTTAATTGTCGGGCATTCACCCCGTGTTGAACTGGATGATGAC
TACCCTGGTCTGCACCGAATCAAATTTCGACGACTGGGTGATTCGTGCTTTTCGATCTACGAATTGACATCCATGAACAC
GTCCGAAACACAACAGTAA

Upstream 100 bases:

>100_bases
AGTACACCAAGCGTTAAACGGTGCGTGTCAGGGAATGCTGTAGAAGGCAGACGGTTTGCAGAACAACCGTCTGCCATCCG
TTATATACTGCGACGGCAAG

Downstream 100 bases:

>100_bases
CCTATGCGCATCGCTATTTACCCTGGCAGCTTCGATCCGGTTACGTATGCTCACCTCGACATTGCCCGTCGTGCAACACG
AATTTTTGATCGTGTGATCA

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MRVITGKAKGHRLKAPKGLGTRPMLDRVKEALFSVLEGYGPIRGSVLDLYAGTGSLGIECLSRGADSADFVERNAHVCSI
IADNLRHTRFEQQGHIYHMPVDRFLHRQRGIGRYDIIIMDPPYADPTIEATMQLVASSGVGKEGSLLIVGHSPRVELDDD
YPGLHRIKFRRLGDSCFSIYELTSMNTSETQQ

Sequences:

>Translated_192_residues
MRVITGKAKGHRLKAPKGLGTRPMLDRVKEALFSVLEGYGPIRGSVLDLYAGTGSLGIECLSRGADSADFVERNAHVCSI
IADNLRHTRFEQQGHIYHMPVDRFLHRQRGIGRYDIIIMDPPYADPTIEATMQLVASSGVGKEGSLLIVGHSPRVELDDD
YPGLHRIKFRRLGDSCFSIYELTSMNTSETQQ
>Mature_192_residues
MRVITGKAKGHRLKAPKGLGTRPMLDRVKEALFSVLEGYGPIRGSVLDLYAGTGSLGIECLSRGADSADFVERNAHVCSI
IADNLRHTRFEQQGHIYHMPVDRFLHRQRGIGRYDIIIMDPPYADPTIEATMQLVASSGVGKEGSLLIVGHSPRVELDDD
YPGLHRIKFRRLGDSCFSIYELTSMNTSETQQ

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=198, Percent_Identity=29.2929292929293, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 21326; Mature: 21326

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVITGKAKGHRLKAPKGLGTRPMLDRVKEALFSVLEGYGPIRGSVLDLYAGTGSLGIEC
CCEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
LSRGADSADFVERNAHVCSIIADNLRHTRFEQQGHIYHMPVDRFLHRQRGIGRYDIIIMD
HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCEEEEEEEC
PPYADPTIEATMQLVASSGVGKEGSLLIVGHSPRVELDDDYPGLHRIKFRRLGDSCFSIY
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHH
ELTSMNTSETQQ
HHHCCCCCCCCC
>Mature Secondary Structure
MRVITGKAKGHRLKAPKGLGTRPMLDRVKEALFSVLEGYGPIRGSVLDLYAGTGSLGIEC
CCEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
LSRGADSADFVERNAHVCSIIADNLRHTRFEQQGHIYHMPVDRFLHRQRGIGRYDIIIMD
HHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHCCCCEEEEEEEC
PPYADPTIEATMQLVASSGVGKEGSLLIVGHSPRVELDDDYPGLHRIKFRRLGDSCFSIY
CCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHH
ELTSMNTSETQQ
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]