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The map label for this gene is infA

Identifier: 222525825

GI number: 222525825

Start: 3219314

End: 3219535

Strand: Direct

Name: infA

Synonym: Chy400_2578

Alternate gene names: 222525825

Gene position: 3219314-3219535 (Clockwise)

Preceding gene: 222525824

Following gene: 222525826

Centisome position: 61.1

GC content: 49.1

Gene sequence:

>222_bases
ATGTCAAAGAAGAAAGACGTCATCGAGATGGAGGGTACCATCACGGAACCATTGCCAAACGCAATGTTCCGGGTACAGCT
CGATAATGGGCACGAAGTACTGGCTCACATCTCGGGCAAGATGCGGATGAACTACATTCGTATCTTGAAGGGAGACCGGG
TGCTGGTTGAATTATCGCCATATGACCTGACCCGGGGACGTATTACGTATCGTTATAAGTAG

Upstream 100 bases:

>100_bases
CGAAATCGATGGTCAACGTGAGATCGCGCTCGTGACAGAGGCAATGCTAAAAGCGCTCAGCCCATATCTGGCTCCAGCGC
AGCCGTAGGTTAGGAGACAT

Downstream 100 bases:

>100_bases
GGGGCGCGACGCAGCACGGCGGCGTCCGCCGCCGCAAAGGAGGCAACAATGAAAGTGCGAGCGTCGGTAAAGCCGCGCTG
CGAGTATTGCAAGGTGATTA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MSKKKDVIEMEGTITEPLPNAMFRVQLDNGHEVLAHISGKMRMNYIRILKGDRVLVELSPYDLTRGRITYRYK

Sequences:

>Translated_73_residues
MSKKKDVIEMEGTITEPLPNAMFRVQLDNGHEVLAHISGKMRMNYIRILKGDRVLVELSPYDLTRGRITYRYK
>Mature_72_residues
SKKKDVIEMEGTITEPLPNAMFRVQLDNGHEVLAHISGKMRMNYIRILKGDRVLVELSPYDLTRGRITYRYK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=68.5714285714286, Blast_Score=106, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_CHLAA (A9WH88)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001635989.1
- ProteinModelPortal:   A9WH88
- SMR:   A9WH88
- GeneID:   5826855
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_2391
- HOGENOM:   HBG286099
- OMA:   KMRMHFI
- ProtClustDB:   PRK00276
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8538; Mature: 8407

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKKDVIEMEGTITEPLPNAMFRVQLDNGHEVLAHISGKMRMNYIRILKGDRVLVELSP
CCCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEECCEEEEEECC
YDLTRGRITYRYK
CCCCCCEEEEEEC
>Mature Secondary Structure 
SKKKDVIEMEGTITEPLPNAMFRVQLDNGHEVLAHISGKMRMNYIRILKGDRVLVELSP
CCCCCEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEEECCEEEEEECC
YDLTRGRITYRYK
CCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA