Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525743

Identifier: 222525743

GI number: 222525743

Start: 3136081

End: 3137049

Strand: Direct

Name: 222525743

Synonym: Chy400_2494

Alternate gene names: NA

Gene position: 3136081-3137049 (Clockwise)

Preceding gene: 222525742

Following gene: 222525751

Centisome position: 59.52

GC content: 57.17

Gene sequence:

>969_bases
ATGTCCGAGACCAATGATCGTGTGCGGAGCAAAGCTGCTCGTCTCCGCCGCATTGAACACCAGCTCTACAACGCCCCCGA
TGGGCTGAGTGTGGTTGACCTGGCTCGACTATGTGGTGTCAATCGGCGCACCATCTATCGCGATCTCGACATTCTGAGCG
AGAGTGGTGCGCCGATCTGGCAGCACAACGGCAAGTACGGGATCGACCGCAATGCCTATCTGGCAACGATCCGTCTAAAC
CTCAATGAAGCCGTTGCGCTGTTCTTTGCTGCTCGCCTCCTGAGCCATCACAGCGACGAACACAATCCCCATATTGTCTC
GGCCCTCGATCAACTGGCCGCCGGTCTCCCTGATCAGACGATTGCCGGTCATATCGCCCGCCTCGCCAATCTTGTTCGCG
AACGGCCACCCAGTCCGCGTTACGTCGAAATCCTCGAACGACTGACCCGAGCCTGGGCAGATCGGCGCATGGTGCGGATC
CGCTATCGAGCGCCTAACCGACCGGCAACCGAACGTGATATTGCCCCTTATTTTCTTGAAGTTGTGCGCATGACACCGGG
CCTGTACGTCATCGGCTATGATCGTCTCCGTGATGATGTGCGCACCTTCAAGGTTGAGCGCATCGAACACGCTGAGTTAC
TCGACGAGCATTACCACATTCCTGAAGGCTTCGATCCATACGACCATCTGGCGCGGGCATGGGCCGTTATGAGCGAAGCC
GAAGTCACGATTCATCTGCGTTTCACCCCTCAGGTTGCACCCCGCATTCGCGAAAATCGCTGGCACCATAGCCAGCAGCT
CATCGACAATGCTGATGGCGGTTGCGATCTTCACCTCACTGTCGGCGGTATTCGCGAGATTTTGAGTTGGGTCTTGAGCT
GGGGCGCCGATGTTGAGGTATTGGCGCCAGAAGAATTGCGTAACGAAGTGATCAACCACGCTCGCCAGATGCTGGCGCGC
TATGTGTGA

Upstream 100 bases:

>100_bases
GCCGTGAGTATGCCGATGTACGCCGTGATCTGTTTTGGATCACCGTGTGGGGCGGACTACTCATAATTGGGATGATAGTC
GCTTCATTTGTATTGTAGAT

Downstream 100 bases:

>100_bases
TCTGGCGGTCCAGGTCGAAGAGTCTAGAACTTATTTCATAAAAAGCTGTACTATCGCACTCTAATAACCATCTCCAGTGC
CATCACGCGCTGAATTGGTT

Product: Helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein DeoR; Transcriptional Regulator-Like Protein; GntR Family Transcriptional Regulator; HTH Domain Family; Transcriptional Regulator Protein-Like Protein; Transcription Regulator; DeoR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator YobV; HTH Domain Protein; Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator-Like; Metal Dependent Phosphohydrolase; DNA-Bind Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Regulatory Protein Deor; HTH Type; Deor Family Transcritional Regulator

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIWQHNGKYGIDRNAYLATIRLN
LNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQTIAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRI
RYRAPNRPATERDIAPYFLEVVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA
EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEVLAPEELRNEVINHARQMLAR
YV

Sequences:

>Translated_322_residues
MSETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIWQHNGKYGIDRNAYLATIRLN
LNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQTIAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRI
RYRAPNRPATERDIAPYFLEVVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA
EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEVLAPEELRNEVINHARQMLAR
YV
>Mature_321_residues
SETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIWQHNGKYGIDRNAYLATIRLNL
NEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQTIAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRIR
YRAPNRPATERDIAPYFLEVVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEAE
VTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEVLAPEELRNEVINHARQMLARY
V

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37135; Mature: 37004

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIW
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCE
QHNGKYGIDRNAYLATIRLNLNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQT
ECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
IAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRIRYRAPNRPATERDIAPYFLE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHH
VVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA
HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEV
EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEE
LAPEELRNEVINHARQMLARYV
ECHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETNDRVRSKAARLRRIEHQLYNAPDGLSVVDLARLCGVNRRTIYRDLDILSESGAPIW
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCE
QHNGKYGIDRNAYLATIRLNLNEAVALFFAARLLSHHSDEHNPHIVSALDQLAAGLPDQT
ECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
IAGHIARLANLVRERPPSPRYVEILERLTRAWADRRMVRIRYRAPNRPATERDIAPYFLE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHH
VVRMTPGLYVIGYDRLRDDVRTFKVERIEHAELLDEHYHIPEGFDPYDHLARAWAVMSEA
HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
EVTIHLRFTPQVAPRIRENRWHHSQQLIDNADGGCDLHLTVGGIREILSWVLSWGADVEV
EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEE
LAPEELRNEVINHARQMLARYV
ECHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA