| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is purK [H]
Identifier: 222525741
GI number: 222525741
Start: 3134582
End: 3135724
Strand: Reverse
Name: purK [H]
Synonym: Chy400_2492
Alternate gene names: 222525741
Gene position: 3135724-3134582 (Counterclockwise)
Preceding gene: 222525744
Following gene: 222525740
Centisome position: 59.51
GC content: 59.84
Gene sequence:
>1143_bases ATGCGTATTGGAATCTTTGGTGGTGGACAACTGGCCCAGATGTTGACCCAGGCGGCAATTTCACTGGGGATTGAGATCGT GATCTGCGAACGGGTTGCGGATAGTCCCGCTGCGCGCTATACCCAACACGCCATCGTTGGCCCCTGGGAGGATGAGACGG TACTGACTACGTTTGCCCATCAGTGCGATATTGTGACGCTGGAAAATGAGTTTATCGATGCCGGCCTGCTCGAACGGGTC GTCGCTCAGGGGGTACCGGTCTGGCCGGCACCGGCAACTGTAGCAGTGGTGCAGGACAAATTGTGGCAGAAAGAACGGCT GGCCGCTGCCGGCCTGGCCGTACCACCGTTTCGTTCTGTTGCGACCCCGGATGACGTCCTCACTGCGGCCCAGGCGTTCG GCTGGCCACTCGTGCTCAAGACACGTCGTAACGGGTATGATGGCTATGGCAATGCGACGCTCCGCACGGCAGAAGATGTG CTGCCGGCCTGGGAACGGCTTACCCGCGGTGGTAGTCCGTTGCTGGTGGAGGCGTGGGTACCTTTTACGTGTGAACTGGC AGTGATGGTGGTGCGTGGACGTGATGGCACCATCGCGTCCTATCCTGTGGTAGAGACGGTGCAGCAAAACCACATTTGTC ACATTGTCCGGGCACCGGCCCCGATTGAGGCAAAGCTGGCCGCACAGGCGACCGATCTGGCTGTAGCGGCTATTCAGGCT GTTGATGGAGTGGGTATTTTTGGGGTTGAGTTGTTTGCCCTGGCCGATGGTCAGGTGCTGATCAATGAATTAGCGCCCCG TCCCCACAACTCTGGTCACTACACGATTGAAGCGTGCGTAACCTCGCAATTTGAGAACCACCTGCGTGCTGTTGCCGGAT GGCCGTTGGGAGCAACCGCACTCCGCTCACCGGCAGCGGTGATGGTCAACCTGCTTGGCCGTCGTAATGGGCCGATCACC CCAACGGCGATCACCGCAGCGTTGGCCGTACCCGGTGCCCATATGCACTTTTATGGAAAGCGCGAGGAGCGCATCGGACG TAAGATGGGGCACGTCACTGCGCTTGGGTCAACACTGGCTGAAGCAGAAGCCATTGCCCGTCAGGCGGCGGCGCTAGTGG CGATGCCGGACGGGCAGCAATGA
Upstream 100 bases:
>100_bases GTTACCGGCAGCTTGCACATCCGCTCTTCTGAGGGTACTATACCCGACGTAGATTCATGACGGTTCAGACTCAAACGAGG CTTTATTGCTCAATAACTAT
Downstream 100 bases:
>100_bases TTAATCGTTCTGGGCCAGATACAGCATTTCTCGCGGATAAGGAACGAGCGATGACAGATCATCCATTAGTAGGCATTATT ATGGGCAGCGACAGCGACCT
Product: phosphoribosylaminoimidazole carboxylase, ATPase subunit
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MRIGIFGGGQLAQMLTQAAISLGIEIVICERVADSPAARYTQHAIVGPWEDETVLTTFAHQCDIVTLENEFIDAGLLERV VAQGVPVWPAPATVAVVQDKLWQKERLAAAGLAVPPFRSVATPDDVLTAAQAFGWPLVLKTRRNGYDGYGNATLRTAEDV LPAWERLTRGGSPLLVEAWVPFTCELAVMVVRGRDGTIASYPVVETVQQNHICHIVRAPAPIEAKLAAQATDLAVAAIQA VDGVGIFGVELFALADGQVLINELAPRPHNSGHYTIEACVTSQFENHLRAVAGWPLGATALRSPAAVMVNLLGRRNGPIT PTAITAALAVPGAHMHFYGKREERIGRKMGHVTALGSTLAEAEAIARQAAALVAMPDGQQ
Sequences:
>Translated_380_residues MRIGIFGGGQLAQMLTQAAISLGIEIVICERVADSPAARYTQHAIVGPWEDETVLTTFAHQCDIVTLENEFIDAGLLERV VAQGVPVWPAPATVAVVQDKLWQKERLAAAGLAVPPFRSVATPDDVLTAAQAFGWPLVLKTRRNGYDGYGNATLRTAEDV LPAWERLTRGGSPLLVEAWVPFTCELAVMVVRGRDGTIASYPVVETVQQNHICHIVRAPAPIEAKLAAQATDLAVAAIQA VDGVGIFGVELFALADGQVLINELAPRPHNSGHYTIEACVTSQFENHLRAVAGWPLGATALRSPAAVMVNLLGRRNGPIT PTAITAALAVPGAHMHFYGKREERIGRKMGHVTALGSTLAEAEAIARQAAALVAMPDGQQ >Mature_380_residues MRIGIFGGGQLAQMLTQAAISLGIEIVICERVADSPAARYTQHAIVGPWEDETVLTTFAHQCDIVTLENEFIDAGLLERV VAQGVPVWPAPATVAVVQDKLWQKERLAAAGLAVPPFRSVATPDDVLTAAQAFGWPLVLKTRRNGYDGYGNATLRTAEDV LPAWERLTRGGSPLLVEAWVPFTCELAVMVVRGRDGTIASYPVVETVQQNHICHIVRAPAPIEAKLAAQATDLAVAAIQA VDGVGIFGVELFALADGQVLINELAPRPHNSGHYTIEACVTSQFENHLRAVAGWPLGATALRSPAAVMVNLLGRRNGPIT PTAITAALAVPGAHMHFYGKREERIGRKMGHVTALGSTLAEAEAIARQAAALVAMPDGQQ
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=364, Percent_Identity=30.4945054945055, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1788155, Length=403, Percent_Identity=25.8064516129032, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6324702, Length=372, Percent_Identity=40.0537634408602, Blast_Score=275, Evalue=1e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 40422; Mature: 40422
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGIFGGGQLAQMLTQAAISLGIEIVICERVADSPAARYTQHAIVGPWEDETVLTTFAH CEEEEECCHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHEEHHH QCDIVTLENEFIDAGLLERVVAQGVPVWPAPATVAVVQDKLWQKERLAAAGLAVPPFRSV HCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC ATPDDVLTAAQAFGWPLVLKTRRNGYDGYGNATLRTAEDVLPAWERLTRGGSPLLVEAWV CCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEECC PFTCELAVMVVRGRDGTIASYPVVETVQQNHICHIVRAPAPIEAKLAAQATDLAVAAIQA CCEEEEEEEEEECCCCCEECCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH VDGVGIFGVELFALADGQVLINELAPRPHNSGHYTIEACVTSQFENHLRAVAGWPLGATA HCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHH LRSPAAVMVNLLGRRNGPITPTAITAALAVPGAHMHFYGKREERIGRKMGHVTALGSTLA HCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH EAEAIARQAAALVAMPDGQQ HHHHHHHHHHEEEECCCCCC >Mature Secondary Structure MRIGIFGGGQLAQMLTQAAISLGIEIVICERVADSPAARYTQHAIVGPWEDETVLTTFAH CEEEEECCHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHEEHHH QCDIVTLENEFIDAGLLERVVAQGVPVWPAPATVAVVQDKLWQKERLAAAGLAVPPFRSV HCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC ATPDDVLTAAQAFGWPLVLKTRRNGYDGYGNATLRTAEDVLPAWERLTRGGSPLLVEAWV CCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEECC PFTCELAVMVVRGRDGTIASYPVVETVQQNHICHIVRAPAPIEAKLAAQATDLAVAAIQA CCEEEEEEEEEECCCCCEECCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH VDGVGIFGVELFALADGQVLINELAPRPHNSGHYTIEACVTSQFENHLRAVAGWPLGATA HCCCCEEEEEEEEECCCHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCHHH LRSPAAVMVNLLGRRNGPITPTAITAALAVPGAHMHFYGKREERIGRKMGHVTALGSTLA HCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH EAEAIARQAAALVAMPDGQQ HHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA