| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525734
Identifier: 222525734
GI number: 222525734
Start: 3129462
End: 3130046
Strand: Reverse
Name: 222525734
Synonym: Chy400_2485
Alternate gene names: NA
Gene position: 3130046-3129462 (Counterclockwise)
Preceding gene: 222525736
Following gene: 222525729
Centisome position: 59.41
GC content: 68.03
Gene sequence:
>585_bases ATGCAGCGCAAGGGTGATAGGGAGCAAGCGGGTCGCGCTGGCGCTGATCTCAGTGATGCGACACGCCCCTATCACAGCCT GACCCCGCTGGGGATGGGAACCAGCGGCACCGAATGGCACCCGCTGGCACGTGCCGGTTCAGGTGCAGAGCGCGCCGGAG GCGCGCGCTCCCAGGGGATTCTGCCCCCCACCCCAGCCCGCCCCCGCTGGGGGCGGGAGTCAATGGGTCGGCGAGGTTCG GCAATGCATGCGCTTCCAGGTGATGAGCGAGCTGGAGGTGTGCGATCCCAGGGGATACTGCCCCCCACCCCAGCCCGCCC CCGCTGGGGGCGGGAGTCAATGGGTTGGCGAGGTTCGGCAATGCATGCGCTTCCAGGTGCTGAGCGAGCTGGAGGTGTGC GCTCCCAGGGGATTCTGCCCCCACTCCTGCCCGCCCCCGCTGGGGGCGGGAGTCAATGGGTTGGCGAGGTTCGGCAATGC ATGCGCTTCCAGGTGCTGAGCGAGCTGAAGGTGTGCGATCCCAGGGTGATACCGGTTTTGCGCACGATGGTGATCAGGTG GCGCGGCGGGGTGACGTTGGTTTGA
Upstream 100 bases:
>100_bases CCGGTGTTGCGTGCAACGTCGTGCTGTTCAGCCTGGCAGTCAGCCTCCGTGACGAGCGATGGCTTCGTTAAAACAGATTT GATAGACTGTCCGCACGCAA
Downstream 100 bases:
>100_bases GGTACGCACGACATAAGCTCATGCCGGCGGGTATCACTCTCTACAAAGGCCGGCGCGCCGGGATGCCAACGGCGCGGGGG AAGCGGTTGGGAGTAGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MQRKGDREQAGRAGADLSDATRPYHSLTPLGMGTSGTEWHPLARAGSGAERAGGARSQGILPPTPARPRWGRESMGRRGS AMHALPGDERAGGVRSQGILPPTPARPRWGRESMGWRGSAMHALPGAERAGGVRSQGILPPLLPAPAGGGSQWVGEVRQC MRFQVLSELKVCDPRVIPVLRTMVIRWRGGVTLV
Sequences:
>Translated_194_residues MQRKGDREQAGRAGADLSDATRPYHSLTPLGMGTSGTEWHPLARAGSGAERAGGARSQGILPPTPARPRWGRESMGRRGS AMHALPGDERAGGVRSQGILPPTPARPRWGRESMGWRGSAMHALPGAERAGGVRSQGILPPLLPAPAGGGSQWVGEVRQC MRFQVLSELKVCDPRVIPVLRTMVIRWRGGVTLV >Mature_194_residues MQRKGDREQAGRAGADLSDATRPYHSLTPLGMGTSGTEWHPLARAGSGAERAGGARSQGILPPTPARPRWGRESMGRRGS AMHALPGDERAGGVRSQGILPPTPARPRWGRESMGWRGSAMHALPGAERAGGVRSQGILPPLLPAPAGGGSQWVGEVRQC MRFQVLSELKVCDPRVIPVLRTMVIRWRGGVTLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20660; Mature: 20660
Theoretical pI: Translated: 12.16; Mature: 12.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKGDREQAGRAGADLSDATRPYHSLTPLGMGTSGTEWHPLARAGSGAERAGGARSQGI CCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCC LPPTPARPRWGRESMGRRGSAMHALPGDERAGGVRSQGILPPTPARPRWGRESMGWRGSA CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MHALPGAERAGGVRSQGILPPLLPAPAGGGSQWVGEVRQCMRFQVLSELKVCDPRVIPVL CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RTMVIRWRGGVTLV HHHHHHHCCCEECC >Mature Secondary Structure MQRKGDREQAGRAGADLSDATRPYHSLTPLGMGTSGTEWHPLARAGSGAERAGGARSQGI CCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCHHHCCCCHHHCCCCCCCCC LPPTPARPRWGRESMGRRGSAMHALPGDERAGGVRSQGILPPTPARPRWGRESMGWRGSA CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MHALPGAERAGGVRSQGILPPLLPAPAGGGSQWVGEVRQCMRFQVLSELKVCDPRVIPVL CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH RTMVIRWRGGVTLV HHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA