| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hyuB [H]
Identifier: 222525685
GI number: 222525685
Start: 3074450
End: 3076384
Strand: Reverse
Name: hyuB [H]
Synonym: Chy400_2436
Alternate gene names: 222525685
Gene position: 3076384-3074450 (Counterclockwise)
Preceding gene: 222525686
Following gene: 222525684
Centisome position: 58.39
GC content: 59.64
Gene sequence:
>1935_bases ATGGCGACCAATCTCAAAATTGCGACGATCCCCCAGATCGAGATCGATCCGGTGACGCTCGATATTATCGAGAATGCGCT CAAGAATACGCGCTATGAGATGGATGCTGTGCTTTACCGCACAGCAATGAGTCCGGTGATCCGCGAACAGCACGATCAGT TTCCGATGATCACCGATCCGCACGGGCGGATGGTCGTTGGTCAATTCGGCTCGTACATCGCCGGCCTGCTCGACAACTGG GATCAGACCATCGAACCGGGCGATGTTATTCTGCTCTCCGATCCATACCTCTGTGGTGGTGCCATCAGCCATATCAACGA TTTGCTGGTGATGCTGCCCATCTTCTACGGCGAAGGCGATGAGCGGGAACTGGTCGGCTGGGCAAGCATGTTCGGCCATG CCCAGGATGTCGGCGGGCCATTGCCCGGCTCACTGCCGACTACGGCGACGACCATCTTCGGCGAAGGTTTGCGGCTGCCG CCGGTCAAAATCTACGAGCGCGGGAAGCTCAACCGGGCAGTCCTCGACATTATGCTCAACAACGTTCGCCAGCCTGAAAT GAATCGCGCCGACCTGATGGCGATTATTGCCAGTTGCCGCACCGCCGAGAAGCGCGTGATCGAGCTGTGCAATCGCTTCG GTAAAGATGTCTATCTGGCGGCTACGCAGGCGCTCCTCGACCGCACCTACCGGGCGATGAAGGAACTGATCGTGCGCAAC CTGCCCGAAGAGCCACAGTCGTTTGAAGATTACGTTGACGACGACGGTCTCGGTAATGGGCCGTTCAAGATGAAGCTAAC CATCTGGCGTGAAGGCCACGAAGCCTACTTCGACTGGACAGGCACCGATCCCCAGGCGATGGGGCCGATCAACTTCTACC TCAACGAGTCGATGTTCAAGATGTTCATCGGCGTCTACCTGATCATGGTCTTCGACCCTCAAATCCTGTTCAACGACGGC TTCTACCCGCTGCTGCACGTCACCATGCCGAAGGGCAGCCTGATCCAGCCCGAATTCCCGGCAGCACTCGGCTGTCGTAC CCACGCCTTGACACGCCTGTTCGATGTGCTCGGCGGTGCGCTGGCCAAGCGAGCGCCTGAATTCACAACCGCCGCCGGTT ATGGCACCTCACCCTACCTGCTCTACTCAGGCTATGATAAGGATGGCGAGTTCTTCTATCTGATGGAGATCAACTACGGT GGGATTCCCGGTCGCCCAATTGGCGACGGTATGGACGGACACTCGTGGTGGCCGTTGTTCACCAACATCCCCACCGAATA TCTGGAGAGCTACTACCCGATCCGTATCGAGCGTTACACCAGCATCATGGACTCAGGCGGTGCCGGTTTCCATCGCGGAG GAAACGGGATCGAGAAGATTTACACCTTCCTTGAACCGGGTGAGATTTCGATCCACGATGACCGCTGGCTGACGCCACCG TGGGGCAACGTCGGCGGCAAGCCGGGGAGTCGTTCGAGCAAGCTGCTGATCCGCACCGACGGCACCCGCCAGGTCTTGCC CAGCAAGTGCGACCAGATCGCGGTCGAGCCGGGAGATCAACTGGTGTATCGGACTGCCGGTGGTGGCGGCTGGAAAGACC CGCTCACCCGGCCACCAGAGGCAGTACAGCGCGACGTGCGTTACGGATTGGTAAGCCGCGAAAAGGCGCTGAACGATTAC GGCGTCGTCCTCCGCGACGATCTCACGATTGACGAGGCAGCTACCGAAGCCAAACGCGCCGAACTGGCAGCAGCACGCGG CGAAATTAAAGGCTTTGACTTCGGGCCACCGCTGGAAGAATTGCTGGCCAATGCCGAAGCCGAAACCGGTCTCCCGGCAC CGCGCAAGCCGCAACCGGTACGCTGGGCCATGGCTCGCGCCGCTCGCCGCGAGCGAATGGCGTCGGCGCAGCAGCAGGCT GTAACTGCCGACTGA
Upstream 100 bases:
>100_bases GACAGCACTACGGTGGTACTACCCGGCCATACGGCAACCGTTGATCGCTACTTCAACCTTCTGATCAACCGCAGTTAAAC TGCTACAGCGAGGAGAATCT
Downstream 100 bases:
>100_bases TAGTTGCCAGAATTATGGGGGTGACAGGATATCCACCAGGGGATGGTACCATCCCGCTGCCTGTCACCCCAGCCTCTGCT GTTCGGCAGCATAACTAGAG
Product: 5-oxoprolinase
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 644; Mature: 643
Protein sequence:
>644_residues MATNLKIATIPQIEIDPVTLDIIENALKNTRYEMDAVLYRTAMSPVIREQHDQFPMITDPHGRMVVGQFGSYIAGLLDNW DQTIEPGDVILLSDPYLCGGAISHINDLLVMLPIFYGEGDERELVGWASMFGHAQDVGGPLPGSLPTTATTIFGEGLRLP PVKIYERGKLNRAVLDIMLNNVRQPEMNRADLMAIIASCRTAEKRVIELCNRFGKDVYLAATQALLDRTYRAMKELIVRN LPEEPQSFEDYVDDDGLGNGPFKMKLTIWREGHEAYFDWTGTDPQAMGPINFYLNESMFKMFIGVYLIMVFDPQILFNDG FYPLLHVTMPKGSLIQPEFPAALGCRTHALTRLFDVLGGALAKRAPEFTTAAGYGTSPYLLYSGYDKDGEFFYLMEINYG GIPGRPIGDGMDGHSWWPLFTNIPTEYLESYYPIRIERYTSIMDSGGAGFHRGGNGIEKIYTFLEPGEISIHDDRWLTPP WGNVGGKPGSRSSKLLIRTDGTRQVLPSKCDQIAVEPGDQLVYRTAGGGGWKDPLTRPPEAVQRDVRYGLVSREKALNDY GVVLRDDLTIDEAATEAKRAELAAARGEIKGFDFGPPLEELLANAEAETGLPAPRKPQPVRWAMARAARRERMASAQQQA VTAD
Sequences:
>Translated_644_residues MATNLKIATIPQIEIDPVTLDIIENALKNTRYEMDAVLYRTAMSPVIREQHDQFPMITDPHGRMVVGQFGSYIAGLLDNW DQTIEPGDVILLSDPYLCGGAISHINDLLVMLPIFYGEGDERELVGWASMFGHAQDVGGPLPGSLPTTATTIFGEGLRLP PVKIYERGKLNRAVLDIMLNNVRQPEMNRADLMAIIASCRTAEKRVIELCNRFGKDVYLAATQALLDRTYRAMKELIVRN LPEEPQSFEDYVDDDGLGNGPFKMKLTIWREGHEAYFDWTGTDPQAMGPINFYLNESMFKMFIGVYLIMVFDPQILFNDG FYPLLHVTMPKGSLIQPEFPAALGCRTHALTRLFDVLGGALAKRAPEFTTAAGYGTSPYLLYSGYDKDGEFFYLMEINYG GIPGRPIGDGMDGHSWWPLFTNIPTEYLESYYPIRIERYTSIMDSGGAGFHRGGNGIEKIYTFLEPGEISIHDDRWLTPP WGNVGGKPGSRSSKLLIRTDGTRQVLPSKCDQIAVEPGDQLVYRTAGGGGWKDPLTRPPEAVQRDVRYGLVSREKALNDY GVVLRDDLTIDEAATEAKRAELAAARGEIKGFDFGPPLEELLANAEAETGLPAPRKPQPVRWAMARAARRERMASAQQQA VTAD >Mature_643_residues ATNLKIATIPQIEIDPVTLDIIENALKNTRYEMDAVLYRTAMSPVIREQHDQFPMITDPHGRMVVGQFGSYIAGLLDNWD QTIEPGDVILLSDPYLCGGAISHINDLLVMLPIFYGEGDERELVGWASMFGHAQDVGGPLPGSLPTTATTIFGEGLRLPP VKIYERGKLNRAVLDIMLNNVRQPEMNRADLMAIIASCRTAEKRVIELCNRFGKDVYLAATQALLDRTYRAMKELIVRNL PEEPQSFEDYVDDDGLGNGPFKMKLTIWREGHEAYFDWTGTDPQAMGPINFYLNESMFKMFIGVYLIMVFDPQILFNDGF YPLLHVTMPKGSLIQPEFPAALGCRTHALTRLFDVLGGALAKRAPEFTTAAGYGTSPYLLYSGYDKDGEFFYLMEINYGG IPGRPIGDGMDGHSWWPLFTNIPTEYLESYYPIRIERYTSIMDSGGAGFHRGGNGIEKIYTFLEPGEISIHDDRWLTPPW GNVGGKPGSRSSKLLIRTDGTRQVLPSKCDQIAVEPGDQLVYRTAGGGGWKDPLTRPPEAVQRDVRYGLVSREKALNDYG VVLRDDLTIDEAATEAKRAELAAARGEIKGFDFGPPLEELLANAEAETGLPAPRKPQPVRWAMARAARRERMASAQQQAV TAD
Specific function: HyuA and hyuB convert D- and L-substituted hydantoins to corresponding N-carbamyl-amino acids [H]
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=549, Percent_Identity=29.143897996357, Blast_Score=152, Evalue=1e-36, Organism=Caenorhabditis elegans, GI133901900, Length=550, Percent_Identity=26.5454545454545, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI133901902, Length=472, Percent_Identity=26.9067796610169, Blast_Score=115, Evalue=9e-26, Organism=Saccharomyces cerevisiae, GI6322634, Length=565, Percent_Identity=25.8407079646018, Blast_Score=150, Evalue=4e-37, Organism=Drosophila melanogaster, GI45550492, Length=575, Percent_Identity=26.9565217391304, Blast_Score=146, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 71650; Mature: 71518
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNLKIATIPQIEIDPVTLDIIENALKNTRYEMDAVLYRTAMSPVIREQHDQFPMITDP CCCCCEEEECCCEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEECC HGRMVVGQFGSYIAGLLDNWDQTIEPGDVILLSDPYLCGGAISHINDLLVMLPIFYGEGD CCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC ERELVGWASMFGHAQDVGGPLPGSLPTTATTIFGEGLRLPPVKIYERGKLNRAVLDIMLN CHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHH NVRQPEMNRADLMAIIASCRTAEKRVIELCNRFGKDVYLAATQALLDRTYRAMKELIVRN HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHC LPEEPQSFEDYVDDDGLGNGPFKMKLTIWREGHEAYFDWTGTDPQAMGPINFYLNESMFK CCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEHHHHHHH MFIGVYLIMVFDPQILFNDGFYPLLHVTMPKGSLIQPEFPAALGCRTHALTRLFDVLGGA HHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LAKRAPEFTTAAGYGTSPYLLYSGYDKDGEFFYLMEINYGGIPGRPIGDGMDGHSWWPLF HHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHH TNIPTEYLESYYPIRIERYTSIMDSGGAGFHRGGNGIEKIYTFLEPGEISIHDDRWLTPP HCCCHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCC WGNVGGKPGSRSSKLLIRTDGTRQVLPSKCDQIAVEPGDQLVYRTAGGGGWKDPLTRPPE CCCCCCCCCCCCCEEEEEECCCHHHCCHHCCEEEECCCCEEEEEECCCCCCCCCCCCCHH AVQRDVRYGLVSREKALNDYGVVLRDDLTIDEAATEAKRAELAAARGEIKGFDFGPPLEE HHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LLANAEAETGLPAPRKPQPVRWAMARAARRERMASAQQQAVTAD HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATNLKIATIPQIEIDPVTLDIIENALKNTRYEMDAVLYRTAMSPVIREQHDQFPMITDP CCCCEEEECCCEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEECC HGRMVVGQFGSYIAGLLDNWDQTIEPGDVILLSDPYLCGGAISHINDLLVMLPIFYGEGD CCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCC ERELVGWASMFGHAQDVGGPLPGSLPTTATTIFGEGLRLPPVKIYERGKLNRAVLDIMLN CHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHH NVRQPEMNRADLMAIIASCRTAEKRVIELCNRFGKDVYLAATQALLDRTYRAMKELIVRN HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHC LPEEPQSFEDYVDDDGLGNGPFKMKLTIWREGHEAYFDWTGTDPQAMGPINFYLNESMFK CCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEHHHHHHH MFIGVYLIMVFDPQILFNDGFYPLLHVTMPKGSLIQPEFPAALGCRTHALTRLFDVLGGA HHHHHHHHHHCCCEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LAKRAPEFTTAAGYGTSPYLLYSGYDKDGEFFYLMEINYGGIPGRPIGDGMDGHSWWPLF HHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHH TNIPTEYLESYYPIRIERYTSIMDSGGAGFHRGGNGIEKIYTFLEPGEISIHDDRWLTPP HCCCHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCC WGNVGGKPGSRSSKLLIRTDGTRQVLPSKCDQIAVEPGDQLVYRTAGGGGWKDPLTRPPE CCCCCCCCCCCCCEEEEEECCCHHHCCHHCCEEEECCCCEEEEEECCCCCCCCCCCCCHH AVQRDVRYGLVSREKALNDYGVVLRDDLTIDEAATEAKRAELAAARGEIKGFDFGPPLEE HHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LLANAEAETGLPAPRKPQPVRWAMARAARRERMASAQQQAVTAD HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732229 [H]