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The map label for this gene is ycdL [C]

Identifier: 222525684

GI number: 222525684

Start: 3073632

End: 3074276

Strand: Reverse

Name: ycdL [C]

Synonym: Chy400_2435

Alternate gene names: 222525684

Gene position: 3074276-3073632 (Counterclockwise)

Preceding gene: 222525685

Following gene: 222525683

Centisome position: 58.35

GC content: 59.53

Gene sequence:

>645_bases
ATGGCCGATTACGATCATCTCACCGCCGACTACCGCCGGCACGGCCTGGCCGGACGGGTCGGCTTTGGCACCTCGCCGGC
TTTACTGGTTATCGACTTCATCAAAGCCTACACCACGCCCGGATCGCCCCTCTACGCTGCGCCAGGCGTACCCGACGCGG
TGCGGGCCAGTCAACCACTGCTGGCAGCAGCTCGTGCAGCGGCGATCCCCATCATCTACACCACGGTCGCTTACGCCAGT
GATGGCCGTGATGGTGGTATCTTCGTCCAGAAAGTACCGGCACTCCGCCAGCTCACCCACGAATCACCGCTTATCGCCAT
CGTCGATGAACTTGCGCCGCAACCAGATGATCTGGTGATCGAAAAGAAGTATGCCAGCGCCTTCTTCGGTACCCATCTTG
CCGCAACGTTAACCGCATTACGGATTGACACACTGATCATGATCGGCTGTTCGACCAGTGGCTGCATTCGGGCCAGTGCA
GTTGACGGCATGCAACACGGATTTCGGGTCATTGTACCCCGTGAGTGTGTCGGTGATCGCGCTCCGGAACCCCACCTCGC
CAACCTCTTCGACATCGATGGCAAATACGGTGATGTGGTCAGCGTGAGCGAGGTACTGGCGTACTTGCAGCAGTTTGCCG
GCTGA

Upstream 100 bases:

>100_bases
CTCTGCTGTTCGGCAGCATAACTAGAGAGCTTTCACAGCGGTTCAAGCAATTATTTCCTGCACCCTCTCCCCCGTATCTG
GCGGAAGGAGGATATTGTTC

Downstream 100 bases:

>100_bases
GAGCGTATGCTGCGTCAAAAAAACCAAAGGCCGTGGCATAACCACGACCTTCAGCACAGCAGGAGGGGGGAGATGAATTG
TGGTGGAGCGAAGGGGATTC

Product: N-carbamoylsarcosine amidase

Products: NA

Alternate protein names: N-carbamoylsarcosine amidohydrolase; CSHase [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MADYDHLTADYRRHGLAGRVGFGTSPALLVIDFIKAYTTPGSPLYAAPGVPDAVRASQPLLAAARAAAIPIIYTTVAYAS
DGRDGGIFVQKVPALRQLTHESPLIAIVDELAPQPDDLVIEKKYASAFFGTHLAATLTALRIDTLIMIGCSTSGCIRASA
VDGMQHGFRVIVPRECVGDRAPEPHLANLFDIDGKYGDVVSVSEVLAYLQQFAG

Sequences:

>Translated_214_residues
MADYDHLTADYRRHGLAGRVGFGTSPALLVIDFIKAYTTPGSPLYAAPGVPDAVRASQPLLAAARAAAIPIIYTTVAYAS
DGRDGGIFVQKVPALRQLTHESPLIAIVDELAPQPDDLVIEKKYASAFFGTHLAATLTALRIDTLIMIGCSTSGCIRASA
VDGMQHGFRVIVPRECVGDRAPEPHLANLFDIDGKYGDVVSVSEVLAYLQQFAG
>Mature_213_residues
ADYDHLTADYRRHGLAGRVGFGTSPALLVIDFIKAYTTPGSPLYAAPGVPDAVRASQPLLAAARAAAIPIIYTTVAYASD
GRDGGIFVQKVPALRQLTHESPLIAIVDELAPQPDDLVIEKKYASAFFGTHLAATLTALRIDTLIMIGCSTSGCIRASAV
DGMQHGFRVIVPRECVGDRAPEPHLANLFDIDGKYGDVVSVSEVLAYLQQFAG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081820, Length=197, Percent_Identity=28.9340101522843, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.59 [H]

Molecular weight: Translated: 22739; Mature: 22608

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYDHLTADYRRHGLAGRVGFGTSPALLVIDFIKAYTTPGSPLYAAPGVPDAVRASQPL
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCHH
LAAARAAAIPIIYTTVAYASDGRDGGIFVQKVPALRQLTHESPLIAIVDELAPQPDDLVI
HHHHHHHHHHHHHHEEECCCCCCCCCEEEEECHHHHHHHCCCCCEEEHHHHCCCCCCEEE
EKKYASAFFGTHLAATLTALRIDTLIMIGCSTSGCIRASAVDGMQHGFRVIVPRECVGDR
EHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEHHHHHHHHCCCEEEECHHHHCCC
APEPHLANLFDIDGKYGDVVSVSEVLAYLQQFAG
CCCCCCCCEEECCCCCCCEECHHHHHHHHHHHCC
>Mature Secondary Structure 
ADYDHLTADYRRHGLAGRVGFGTSPALLVIDFIKAYTTPGSPLYAAPGVPDAVRASQPL
CCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCHH
LAAARAAAIPIIYTTVAYASDGRDGGIFVQKVPALRQLTHESPLIAIVDELAPQPDDLVI
HHHHHHHHHHHHHHEEECCCCCCCCCEEEEECHHHHHHHCCCCCEEEHHHHCCCCCCEEE
EKKYASAFFGTHLAATLTALRIDTLIMIGCSTSGCIRASAVDGMQHGFRVIVPRECVGDR
EHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCEEHHHHHHHHCCCEEEECHHHHCCC
APEPHLANLFDIDGKYGDVVSVSEVLAYLQQFAG
CCCCCCCCEEECCCCCCCEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1381445; 8913306 [H]