| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is ybhG [C]
Identifier: 222525535
GI number: 222525535
Start: 2889597
End: 2891117
Strand: Direct
Name: ybhG [C]
Synonym: Chy400_2284
Alternate gene names: 222525535
Gene position: 2889597-2891117 (Clockwise)
Preceding gene: 222525534
Following gene: 222525536
Centisome position: 54.84
GC content: 56.41
Gene sequence:
>1521_bases ATGCGACGTTTCTGGTTGATGTTGATCACCATGCTGGCGTTGCTGCTAAGTGCATGTACTCAGCAGACGATGCCTGATAC CGAAGCGGTAGCTGTGGCGACGCCGCAGGCGACTGAATCATCGCCGGTACCTGCCTCAACTGCTGCTCCGACCATTGTCA ATGGCACCCTGATCGCTAATGGACGTGTTCAGCCAATGACCGTGCTTGATCTCAGTTTTGTCAATGGCGGATCGGTCGTC GAGGTGCTGGTTAAACCCGGGGATCGGGTGCGGGCCGGTGATGTTATGGCAAGCCTGGATATTCGGGCACTCGATCTGAC ACTGGCTGAAGCGCGGGTAGCACTGGCAGAGGCACAGGCGAATTATGAGCAGTTGCGTAGTGGAGCTACTCCCGAGCAAA TTGCCCAGGCTGAAGCCGAAATTGAACGTGCCCGTGCCCGGTTGGCCGATGGGCGGACAAATGTCACCCAAAGCGATATT GCTGCTGTCCAGGCTGAATTGCGGGAGGCGCGCGCAGTGCTCGAGCGCTTGCAGAAGGGAATTACGCCAGAGGATCGTGC CCGTCTGGAAGCGGCAGTAGCCGAAGCCAAAGCTCGCTTGCAAACTCGCATCAATACGCTGGCAGGTGAAAAGACCCAGC TCGAGTCGCAGATCGAACGATTGGCGAACGAGTTGCGTAATGCGCAGGATGACTATTCGCGCACCGCGTGGGCCAATCAG CAGATTGTGGCGAATGGTGGTCAATTGACCCAGGCGCAAATCGATAATGAAACCCGGTTGTTGCGAGCCGTCGAAAATGC CGAGCGGCGTCTGCAAGAAGCGCGGGTAGCTTTAGAGACGGTGCGTCAGAACGAGTTTAGCGAGATTGCGGCTTATCGGG CAGAGGTGGAACAGGCCGAGGCTTTATTGGCCGATGCGTCACGCCCGGCCACACCTGATCAGATTGCGGCTGCCGAGAAG CGAATCTTGCAGGCCGAGGCGCGATTGGCGCAACTGACTATCAATCATCCCAATGAAGTTGCCGTTTACGAAGCAGAACT GCGCAAGGCTGAAGCTGATTTTGCCCGTCTGGTAGCTGAACCAACCAGCGCCCAGATCGCGATTGCGCAGGCACGGATCG AGCGCGCTGAAATTGAGGTGCGGCGGGCTGAATTGAACCGTGAACGGTACCAGATTCGAGCACCGATTGATGCGACGGTG GTCACAGTAACGGTGCAACCTGGTCAGACGGTTGAAGCCAATCAGCGGGTTATCACCCTGGCAACGCTGGATCAGTGGCA AATTGTGGTGCCTAACTTGAGTGAAATTCATGTCAGCCTGATCCAGGAAAACGATCCGGTCACGATCAGTTTCATCGCTC TCCCTGATCTACGTCTGAGCGGAAGGGTCAGCTACATCGAACCGATTGGTCAGGAGACCGGTATCGGTACGACGTATACC GTGCGCATTATTCCCGATAGCTGGGATCAGCGGCTGCGCTGGAATATGAATGCGCAAGTCGTCTTTTCGGCAGGTCAGTA A
Upstream 100 bases:
>100_bases CAGCCGATTCGCTCTTCCAGTTGCACGTCGCACCGAATCGACGCCTGCGATGGTGGTGGCTAACCGCAGTGAGACCGTTG GCGATGCAGGAGATTGACCT
Downstream 100 bases:
>100_bases CCATCCTGGAGGAGGAAGCAAATGACGAGTGCGAAGACGCCTCATGCCTTGATTACCGGTGGCGCAGGGTATATTGGTTC TTTACTAACCGGCGTGCTCT
Product: secretion protein HlyD family protein
Products: NA
Alternate protein names: RND Family Efflux Transporter MFP Subunit; Multidrug Resistance Efflux Pump-Like Protein
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MRRFWLMLITMLALLLSACTQQTMPDTEAVAVATPQATESSPVPASTAAPTIVNGTLIANGRVQPMTVLDLSFVNGGSVV EVLVKPGDRVRAGDVMASLDIRALDLTLAEARVALAEAQANYEQLRSGATPEQIAQAEAEIERARARLADGRTNVTQSDI AAVQAELREARAVLERLQKGITPEDRARLEAAVAEAKARLQTRINTLAGEKTQLESQIERLANELRNAQDDYSRTAWANQ QIVANGGQLTQAQIDNETRLLRAVENAERRLQEARVALETVRQNEFSEIAAYRAEVEQAEALLADASRPATPDQIAAAEK RILQAEARLAQLTINHPNEVAVYEAELRKAEADFARLVAEPTSAQIAIAQARIERAEIEVRRAELNRERYQIRAPIDATV VTVTVQPGQTVEANQRVITLATLDQWQIVVPNLSEIHVSLIQENDPVTISFIALPDLRLSGRVSYIEPIGQETGIGTTYT VRIIPDSWDQRLRWNMNAQVVFSAGQ
Sequences:
>Translated_506_residues MRRFWLMLITMLALLLSACTQQTMPDTEAVAVATPQATESSPVPASTAAPTIVNGTLIANGRVQPMTVLDLSFVNGGSVV EVLVKPGDRVRAGDVMASLDIRALDLTLAEARVALAEAQANYEQLRSGATPEQIAQAEAEIERARARLADGRTNVTQSDI AAVQAELREARAVLERLQKGITPEDRARLEAAVAEAKARLQTRINTLAGEKTQLESQIERLANELRNAQDDYSRTAWANQ QIVANGGQLTQAQIDNETRLLRAVENAERRLQEARVALETVRQNEFSEIAAYRAEVEQAEALLADASRPATPDQIAAAEK RILQAEARLAQLTINHPNEVAVYEAELRKAEADFARLVAEPTSAQIAIAQARIERAEIEVRRAELNRERYQIRAPIDATV VTVTVQPGQTVEANQRVITLATLDQWQIVVPNLSEIHVSLIQENDPVTISFIALPDLRLSGRVSYIEPIGQETGIGTTYT VRIIPDSWDQRLRWNMNAQVVFSAGQ >Mature_506_residues MRRFWLMLITMLALLLSACTQQTMPDTEAVAVATPQATESSPVPASTAAPTIVNGTLIANGRVQPMTVLDLSFVNGGSVV EVLVKPGDRVRAGDVMASLDIRALDLTLAEARVALAEAQANYEQLRSGATPEQIAQAEAEIERARARLADGRTNVTQSDI AAVQAELREARAVLERLQKGITPEDRARLEAAVAEAKARLQTRINTLAGEKTQLESQIERLANELRNAQDDYSRTAWANQ QIVANGGQLTQAQIDNETRLLRAVENAERRLQEARVALETVRQNEFSEIAAYRAEVEQAEALLADASRPATPDQIAAAEK RILQAEARLAQLTINHPNEVAVYEAELRKAEADFARLVAEPTSAQIAIAQARIERAEIEVRRAELNRERYQIRAPIDATV VTVTVQPGQTVEANQRVITLATLDQWQIVVPNLSEIHVSLIQENDPVTISFIALPDLRLSGRVSYIEPIGQETGIGTTYT VRIIPDSWDQRLRWNMNAQVVFSAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane-associated. Inner membrane [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55572; Mature: 55572
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFWLMLITMLALLLSACTQQTMPDTEAVAVATPQATESSPVPASTAAPTIVNGTLIAN CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEEEC GRVQPMTVLDLSFVNGGSVVEVLVKPGDRVRAGDVMASLDIRALDLTLAEARVALAEAQA CCCCCEEEEEEEECCCCCEEEEEECCCCCEECCCEEEECCEEEEHHHHHHHHHHHHHHHC NYEQLRSGATPEQIAQAEAEIERARARLADGRTNVTQSDIAAVQAELREARAVLERLQKG CHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC ITPEDRARLEAAVAEAKARLQTRINTLAGEKTQLESQIERLANELRNAQDDYSRTAWANQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC QIVANGGQLTQAQIDNETRLLRAVENAERRLQEARVALETVRQNEFSEIAAYRAEVEQAE EEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLADASRPATPDQIAAAEKRILQAEARLAQLTINHPNEVAVYEAELRKAEADFARLVAE HHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHHHHHHHCC PTSAQIAIAQARIERAEIEVRRAELNRERYQIRAPIDATVVTVTVQPGQTVEANQRVITL CCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCEEEEE ATLDQWQIVVPNLSEIHVSLIQENDPVTISFIALPDLRLSGRVSYIEPIGQETGIGTTYT EECCCCEEECCCHHHHHHEEEECCCCEEEEEEEECCCEECCCCHHHCCCCCCCCCCCEEE VRIIPDSWDQRLRWNMNAQVVFSAGQ EEEECCCCCCHHEECCCEEEEEECCC >Mature Secondary Structure MRRFWLMLITMLALLLSACTQQTMPDTEAVAVATPQATESSPVPASTAAPTIVNGTLIAN CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCEEEEC GRVQPMTVLDLSFVNGGSVVEVLVKPGDRVRAGDVMASLDIRALDLTLAEARVALAEAQA CCCCCEEEEEEEECCCCCEEEEEECCCCCEECCCEEEECCEEEEHHHHHHHHHHHHHHHC NYEQLRSGATPEQIAQAEAEIERARARLADGRTNVTQSDIAAVQAELREARAVLERLQKG CHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC ITPEDRARLEAAVAEAKARLQTRINTLAGEKTQLESQIERLANELRNAQDDYSRTAWANQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC QIVANGGQLTQAQIDNETRLLRAVENAERRLQEARVALETVRQNEFSEIAAYRAEVEQAE EEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLADASRPATPDQIAAAEKRILQAEARLAQLTINHPNEVAVYEAELRKAEADFARLVAE HHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHHHHHHHCC PTSAQIAIAQARIERAEIEVRRAELNRERYQIRAPIDATVVTVTVQPGQTVEANQRVITL CCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCCEEEEE ATLDQWQIVVPNLSEIHVSLIQENDPVTISFIALPDLRLSGRVSYIEPIGQETGIGTTYT EECCCCEEECCCHHHHHHEEEECCCCEEEEEEEECCCEECCCCHHHCCCCCCCCCCCEEE VRIIPDSWDQRLRWNMNAQVVFSAGQ EEEECCCCCCHHEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA