Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is yibD [C]

Identifier: 222525532

GI number: 222525532

Start: 2885684

End: 2886664

Strand: Direct

Name: yibD [C]

Synonym: Chy400_2281

Alternate gene names: 222525532

Gene position: 2885684-2886664 (Clockwise)

Preceding gene: 222525531

Following gene: 222525533

Centisome position: 54.77

GC content: 56.17

Gene sequence:

>981_bases
ATGGCAGCGACGGTAACGGTGGCAATCCCGGTTTACAAGCGACTAACTTACGTCGCCCAGGCCATCCGATCAGTAGCTGA
TCAGGACTATCCGGCTATTGAGTTGATTGTTTCCGATAATGGCTGTAATGGCGACGCTGTGCTGAATCTGGTGCGTGAGT
ATTATCCACGCCCCTTTGTGTTTCGTCAGAACCCAACGTCGGTGCCGATTGTGCCGCACTTTAATCAGTTGCTGGCCGCC
GCCAGTGGTGATTATTTTGTCCTGCTGAGCGATGATGATGAACTGGCACCGGGCTATCTGACCGCTATGGTGGCAGCTCT
GGAGTCTCATACTGGGGCAGCCGCTGCCATTTCCCGGGTTGAAGTACTCGATGAACAGAACCGGGTCGTGGCTTCGACCG
CCGACCGACCATTGCCGCCGCGAGTGATGCGTGGCCCTGATTGGATCCGTCGCTGGGGCCATAACCAGCACAAATTCGTC
TGCTTTACCACCAATCTGGCGCGTACCGCCGATCTGCGGGCAGTTGGTGGGTACCCCGATTTCGATGGTGGTAATGGGGT
AGATAACGCTCTTCTGGTTGTCCTCAGCATTGATCGTAGCATTGTCTACTGCGATGAAGCGGTGTTTCGCCATCGCATCT
ACGACACCAGTTTTGGCAAATCGGTGGGTGTGTCCAGTCTGGCGCGGGCATCACGGCAGTTTCTGGCATTTCTGCACCAG
CATCCGGTGTTGCGTGCATACGCACGACAACATCCGCACGAATGGGCTGTCTGCCGTGATGCCATTACGCGCGTGATCTG
GACAACGTACTACGGACGATGGCGACAGCTCTACCGTGGTCGGGAACGGTACATTGACTGGCTGAAAGCCGGTTTTGCTT
TACCGTTTATTCCGGCATACTACCGGCGAGCACTGCCTGAAATGCTCTACTCATTACCGGCAGTGGGGACGCTGGCTCGC
CGACGTTTACCGGCACGGTGA

Upstream 100 bases:

>100_bases
TGTAACCCGCAGTCTGCCGGCAGGGGTGATTGCCGCCGGTATTCCGGCGCGTATTGTACGTGAGCGAACTGAGCAGGATG
TGGAACGTACGAGGTGAACA

Downstream 100 bases:

>100_bases
CGGATATGCACGTGGTTCATCTCAGCACCAACGATATAAGCGGCGGTGCGGCCAGAGCAGCCTATCGTCTGCATCGAGCC
TTACTTGCGGCGGGCTGTCG

Product: glycosyl transferase family 2 protein

Products: NA

Alternate protein names: Glycosyl Transferase Family 2 Protein; Glycosyltransferase; Glycosyl Transferase

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MAATVTVAIPVYKRLTYVAQAIRSVADQDYPAIELIVSDNGCNGDAVLNLVREYYPRPFVFRQNPTSVPIVPHFNQLLAA
ASGDYFVLLSDDDELAPGYLTAMVAALESHTGAAAAISRVEVLDEQNRVVASTADRPLPPRVMRGPDWIRRWGHNQHKFV
CFTTNLARTADLRAVGGYPDFDGGNGVDNALLVVLSIDRSIVYCDEAVFRHRIYDTSFGKSVGVSSLARASRQFLAFLHQ
HPVLRAYARQHPHEWAVCRDAITRVIWTTYYGRWRQLYRGRERYIDWLKAGFALPFIPAYYRRALPEMLYSLPAVGTLAR
RRLPAR

Sequences:

>Translated_326_residues
MAATVTVAIPVYKRLTYVAQAIRSVADQDYPAIELIVSDNGCNGDAVLNLVREYYPRPFVFRQNPTSVPIVPHFNQLLAA
ASGDYFVLLSDDDELAPGYLTAMVAALESHTGAAAAISRVEVLDEQNRVVASTADRPLPPRVMRGPDWIRRWGHNQHKFV
CFTTNLARTADLRAVGGYPDFDGGNGVDNALLVVLSIDRSIVYCDEAVFRHRIYDTSFGKSVGVSSLARASRQFLAFLHQ
HPVLRAYARQHPHEWAVCRDAITRVIWTTYYGRWRQLYRGRERYIDWLKAGFALPFIPAYYRRALPEMLYSLPAVGTLAR
RRLPAR
>Mature_325_residues
AATVTVAIPVYKRLTYVAQAIRSVADQDYPAIELIVSDNGCNGDAVLNLVREYYPRPFVFRQNPTSVPIVPHFNQLLAAA
SGDYFVLLSDDDELAPGYLTAMVAALESHTGAAAAISRVEVLDEQNRVVASTADRPLPPRVMRGPDWIRRWGHNQHKFVC
FTTNLARTADLRAVGGYPDFDGGNGVDNALLVVLSIDRSIVYCDEAVFRHRIYDTSFGKSVGVSSLARASRQFLAFLHQH
PVLRAYARQHPHEWAVCRDAITRVIWTTYYGRWRQLYRGRERYIDWLKAGFALPFIPAYYRRALPEMLYSLPAVGTLARR
RLPAR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36770; Mature: 36639

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATVTVAIPVYKRLTYVAQAIRSVADQDYPAIELIVSDNGCNGDAVLNLVREYYPRPFV
CCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
FRQNPTSVPIVPHFNQLLAAASGDYFVLLSDDDELAPGYLTAMVAALESHTGAAAAISRV
ECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
EVLDEQNRVVASTADRPLPPRVMRGPDWIRRWGHNQHKFVCFTTNLARTADLRAVGGYPD
HHHCCCCCEEEECCCCCCCCHHCCCHHHHHHCCCCCCEEEEEECCCHHHCCCEEECCCCC
FDGGNGVDNALLVVLSIDRSIVYCDEAVFRHRIYDTSFGKSVGVSSLARASRQFLAFLHQ
CCCCCCCCHHEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
HPVLRAYARQHPHEWAVCRDAITRVIWTTYYGRWRQLYRGRERYIDWLKAGFALPFIPAY
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YRRALPEMLYSLPAVGTLARRRLPAR
HHHHHHHHHHHCCCHHHHHHHCCCCC
>Mature Secondary Structure 
AATVTVAIPVYKRLTYVAQAIRSVADQDYPAIELIVSDNGCNGDAVLNLVREYYPRPFV
CCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEE
FRQNPTSVPIVPHFNQLLAAASGDYFVLLSDDDELAPGYLTAMVAALESHTGAAAAISRV
ECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
EVLDEQNRVVASTADRPLPPRVMRGPDWIRRWGHNQHKFVCFTTNLARTADLRAVGGYPD
HHHCCCCCEEEECCCCCCCCHHCCCHHHHHHCCCCCCEEEEEECCCHHHCCCEEECCCCC
FDGGNGVDNALLVVLSIDRSIVYCDEAVFRHRIYDTSFGKSVGVSSLARASRQFLAFLHQ
CCCCCCCCHHEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
HPVLRAYARQHPHEWAVCRDAITRVIWTTYYGRWRQLYRGRERYIDWLKAGFALPFIPAY
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
YRRALPEMLYSLPAVGTLARRRLPAR
HHHHHHHHHHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA