| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525524
Identifier: 222525524
GI number: 222525524
Start: 2876030
End: 2877529
Strand: Direct
Name: 222525524
Synonym: Chy400_2273
Alternate gene names: NA
Gene position: 2876030-2877529 (Clockwise)
Preceding gene: 222525523
Following gene: 222525525
Centisome position: 54.58
GC content: 60.33
Gene sequence:
>1500_bases ATGAGCCGTCAGCCTGAACCTATGGGTCACCACTATGCTTTGCGTCGCTATGGTGTCGCGTTGCTCTTACCAACCATCCT GCTCGTCGGGATGGTGACTTTGTACCCCTTTGCTTTCACCAGACCATGGCCGGCCAATCCAATCTTCGAGCTGATGACCG GCCTGAGCCATGCGTTTGATATGGCGCAAAATATTGTTCTGTTTATTCCGTTAGGCATGGCGTTACGCTGGTTTCTGGCC GGTTGTAGCGTGCCTCTACCTGGGCAGCGCGCTGGTGTCATCCTGTTGAGTGCGTCTGTCGCGCTCGGGATTGAGGTTGC CCAACTGACCATTCCCGGTCGCACCGCTGCGCTACTGGATGTGGTTGCGAACACGTCGGGCGCAGCTTTGGGAGCGTGGT GGCTGGCGCAGCCAATGCTTCCCCTGGTCGAGCGACTCGGCTTCTGGATACATCAGGGTGTACGGATGACGCCGGCGTGG GTCGTGTTTGTTGGATTGGCGATCTGGCTGGCCGGCAGCACGTGGATGGTCACGCGCTGGCAACGAGCAACACTGCCAAC GACGTGGTCGGATCGCTACACGCTTCAAATCGGCGCTGCCGATGACGGGCGGCGCTTTTGGCCAGGTTATGTGGGCTTTA CCGCCCTCTACAATCGGGCCTTTACCGCAGATGATGCGCAAGCGGTACAGACCCCGGGCGATGCAATCGCGAGGCAACCG TTATTCGCCTACGATTTCAGCGAGCTGCCCCCGGCTGGGAATGGGCCATTTGCGCGTCCGCTGGTGGCTCAGGGTCGGCC CACCCTCACCGAATCCGGGGTAGGTGTGGGGTATCAGCGCTGGCTGATGAGCAGTGAGCCATTGCGTGGCGTGGCAGCGG AGATTGCCCGGACACGAGCATTTACGCTGGTCGCTCAGGTGGCTGCCCGCGAACCAGATCGCACCACAGAGGGCCTGATT GTCAATTTTGGCCGTGGCATTGATGGACACAACATCAGTTTGATTCAGGCAGGTGCCGACCTGTTGGTACGGATGCGGCT GCCGCTGACCCGTGTAGCCGATGACCGGCCACCGTTGCGCTTTGCCGATGTCTTCCCTGACGGGCAACCACGGCTGTTAG CGTTGAGTTATGACGGTGCCGTTGCCCGGCTCTTTGTTGATGGTCAGGCACACCCGCAATGGTACACCTTTGGCCCGGGC GAAGCGCTGATCAATCGCTGGCTCCCGGTTCAAACGCATCAGATCGGGGGCTGGACGATTGCGCTGGCCGGAGCGATCTG TCTTCCGCTGGCACTGGCTGGCTTGCCCTGGCGCGGTGGGCGCTGGCCACCGATCACCATCGCGGTAGTAGGGCCACTGC TCATCAGTAGTGCGCCCTGGCTGGTTATTGCCCAGTCGTTGAGTGGGGGGATGCTGGTGGCCAGCAGTGCGACGGTGCTT GTTGGATGCACCCTGGCGTATTGGTTAACCAGGTCATATTCAGCGGATGATAATCTATGA
Upstream 100 bases:
>100_bases TTTCAGGTGATTGATAGTCTGGAAGGTGACTCAGCACGTGGTGATTGGGCCGGCAATCTTTCCGGGGTGGTGCGACCACT CTTACCGTGGACGACGATCT
Downstream 100 bases:
>100_bases AAAAGCTACTATACTGCTTGCTTTTGCTCATTCTGATCATCGTTACGACGAACGATATTATGCTGGCGCAATCACCATCA TTCGATTGGCGAAGTGATTG
Product: VanZ family protein
Products: NA
Alternate protein names: VanZ Like Family
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSRQPEPMGHHYALRRYGVALLLPTILLVGMVTLYPFAFTRPWPANPIFELMTGLSHAFDMAQNIVLFIPLGMALRWFLA GCSVPLPGQRAGVILLSASVALGIEVAQLTIPGRTAALLDVVANTSGAALGAWWLAQPMLPLVERLGFWIHQGVRMTPAW VVFVGLAIWLAGSTWMVTRWQRATLPTTWSDRYTLQIGAADDGRRFWPGYVGFTALYNRAFTADDAQAVQTPGDAIARQP LFAYDFSELPPAGNGPFARPLVAQGRPTLTESGVGVGYQRWLMSSEPLRGVAAEIARTRAFTLVAQVAAREPDRTTEGLI VNFGRGIDGHNISLIQAGADLLVRMRLPLTRVADDRPPLRFADVFPDGQPRLLALSYDGAVARLFVDGQAHPQWYTFGPG EALINRWLPVQTHQIGGWTIALAGAICLPLALAGLPWRGGRWPPITIAVVGPLLISSAPWLVIAQSLSGGMLVASSATVL VGCTLAYWLTRSYSADDNL
Sequences:
>Translated_499_residues MSRQPEPMGHHYALRRYGVALLLPTILLVGMVTLYPFAFTRPWPANPIFELMTGLSHAFDMAQNIVLFIPLGMALRWFLA GCSVPLPGQRAGVILLSASVALGIEVAQLTIPGRTAALLDVVANTSGAALGAWWLAQPMLPLVERLGFWIHQGVRMTPAW VVFVGLAIWLAGSTWMVTRWQRATLPTTWSDRYTLQIGAADDGRRFWPGYVGFTALYNRAFTADDAQAVQTPGDAIARQP LFAYDFSELPPAGNGPFARPLVAQGRPTLTESGVGVGYQRWLMSSEPLRGVAAEIARTRAFTLVAQVAAREPDRTTEGLI VNFGRGIDGHNISLIQAGADLLVRMRLPLTRVADDRPPLRFADVFPDGQPRLLALSYDGAVARLFVDGQAHPQWYTFGPG EALINRWLPVQTHQIGGWTIALAGAICLPLALAGLPWRGGRWPPITIAVVGPLLISSAPWLVIAQSLSGGMLVASSATVL VGCTLAYWLTRSYSADDNL >Mature_498_residues SRQPEPMGHHYALRRYGVALLLPTILLVGMVTLYPFAFTRPWPANPIFELMTGLSHAFDMAQNIVLFIPLGMALRWFLAG CSVPLPGQRAGVILLSASVALGIEVAQLTIPGRTAALLDVVANTSGAALGAWWLAQPMLPLVERLGFWIHQGVRMTPAWV VFVGLAIWLAGSTWMVTRWQRATLPTTWSDRYTLQIGAADDGRRFWPGYVGFTALYNRAFTADDAQAVQTPGDAIARQPL FAYDFSELPPAGNGPFARPLVAQGRPTLTESGVGVGYQRWLMSSEPLRGVAAEIARTRAFTLVAQVAAREPDRTTEGLIV NFGRGIDGHNISLIQAGADLLVRMRLPLTRVADDRPPLRFADVFPDGQPRLLALSYDGAVARLFVDGQAHPQWYTFGPGE ALINRWLPVQTHQIGGWTIALAGAICLPLALAGLPWRGGRWPPITIAVVGPLLISSAPWLVIAQSLSGGMLVASSATVLV GCTLAYWLTRSYSADDNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54116; Mature: 53984
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQPEPMGHHYALRRYGVALLLPTILLVGMVTLYPFAFTRPWPANPIFELMTGLSHAFD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH MAQNIVLFIPLGMALRWFLAGCSVPLPGQRAGVILLSASVALGIEVAQLTIPGRTAALLD HHCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCEEEEEEECCCCHHHHHH VVANTSGAALGAWWLAQPMLPLVERLGFWIHQGVRMTPAWVVFVGLAIWLAGSTWMVTRW HHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEE QRATLPTTWSDRYTLQIGAADDGRRFWPGYVGFTALYNRAFTADDAQAVQTPGDAIARQP ECCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCHHHHCCC LFAYDFSELPPAGNGPFARPLVAQGRPTLTESGVGVGYQRWLMSSEPLRGVAAEIARTRA CEEECHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH FTLVAQVAAREPDRTTEGLIVNFGRGIDGHNISLIQAGADLLVRMRLPLTRVADDRPPLR HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHCCCCCCCE FADVFPDGQPRLLALSYDGAVARLFVDGQAHPQWYTFGPGEALINRWLPVQTHQIGGWTI EEECCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCHHHHHHCCCCCEEEECCCCHH ALAGAICLPLALAGLPWRGGRWPPITIAVVGPLLISSAPWLVIAQSLSGGMLVASSATVL HHHHHHHHHHHHHCCCCCCCCCCCEEHEEHHHHHHCCCCCEEEEECCCCCEEEECCCHHH VGCTLAYWLTRSYSADDNL HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SRQPEPMGHHYALRRYGVALLLPTILLVGMVTLYPFAFTRPWPANPIFELMTGLSHAFD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH MAQNIVLFIPLGMALRWFLAGCSVPLPGQRAGVILLSASVALGIEVAQLTIPGRTAALLD HHCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCEEEEEEECCCCHHHHHH VVANTSGAALGAWWLAQPMLPLVERLGFWIHQGVRMTPAWVVFVGLAIWLAGSTWMVTRW HHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEE QRATLPTTWSDRYTLQIGAADDGRRFWPGYVGFTALYNRAFTADDAQAVQTPGDAIARQP ECCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCHHHHCCC LFAYDFSELPPAGNGPFARPLVAQGRPTLTESGVGVGYQRWLMSSEPLRGVAAEIARTRA CEEECHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH FTLVAQVAAREPDRTTEGLIVNFGRGIDGHNISLIQAGADLLVRMRLPLTRVADDRPPLR HHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCHHHHCCCCCCCE FADVFPDGQPRLLALSYDGAVARLFVDGQAHPQWYTFGPGEALINRWLPVQTHQIGGWTI EEECCCCCCCEEEEEECCCEEEEEEECCCCCCCEEEECCHHHHHHCCCCCEEEECCCCHH ALAGAICLPLALAGLPWRGGRWPPITIAVVGPLLISSAPWLVIAQSLSGGMLVASSATVL HHHHHHHHHHHHHCCCCCCCCCCCEEHEEHHHHHHCCCCCEEEEECCCCCEEEECCCHHH VGCTLAYWLTRSYSADDNL HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA