| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yycG [H]
Identifier: 222525477
GI number: 222525477
Start: 2817135
End: 2818706
Strand: Direct
Name: yycG [H]
Synonym: Chy400_2225
Alternate gene names: 222525477
Gene position: 2817135-2818706 (Clockwise)
Preceding gene: 222525468
Following gene: 222525478
Centisome position: 53.47
GC content: 55.66
Gene sequence:
>1572_bases ATGAGCCAAATGACCGATCTTCGCCTCCGCCAGCGTGAATATTTGCTCCAGATCAGCCGGGCGCTCACTGCGCAGCTTGA CTTGGGTAGTGTGCTGAATCTGGTGATTACCTATGCGGTTGAGCTGCTAGCCGGCACGCTGGGTTTTATTGCGTTGTTTG ACGAAGAGGATGGTGTCCTGCGCATTCGCGCTTCGGCGCAGTTGCCTCGTGAACTCTGGCCGGCCTTCGCACCGTTGCTA CGCATCCCGATTGCCGATCTCGGTCGTTATGGCCCGCAGGTGCTGCGTGATGTTTCACTTGATGCCGGCATTCCCCTCCG CCAGATGATTGCATTGCCGTTGACGGTGCGTGATACGCCGCTCGGAGTGATTTATGTCTTTCGCGCAGCGCTCAATGTAG CCTTTTCTGCCGACGACCGTCAGATTCTGCAGGATTTTGCCGATCAGGCGGCCATTGCCGTTGGTAATGCCCGTCTGTTT CAGAGTGTGTTGCGCGAGAAACAACATTTGAATGCTCTGATCGAGCAGTCGGCTGATGGGGTGATGATTATTGATGGGCG CTGGCGCATTACGACGTTTAACCATACGATGGAACAACTGACCGGTTGGTCGCGCGAAGAGGCGATTGGTCGGCCCTGTG CTGAAGTGTTGGGTATTCGTAATGCACACGGAGTCAATATCTGCCTGAACGAGTGTCCGTTGCAGCGCCGGCCCGACCTC GCCAATCCGGTAGTTGAAGGCTGGATTACCACGCGCGATGGCCGCGATCTGTTTATTCAGAACCGCTATGCACCACAACG CGGTAGCCATGGTCAGCTTCTAAGTGCGATTGCCAATGTTCGCGATATTACGGCGCAAAAGATGGAGGAGGAGCGCCAGA ATACCTTTATTTCGGTTATTTCCCACGAGTTACGTACACCGGTGAGTATCATCAAGGGGTTTGCCGAGACGATGCTGCGC CCCGATGGGCAATTTACGGTTGAGCAATATCGTGAAGCGTTGCAGGTGATCAGTGAAGAGGCCGACCGTCTGGCCCGTCA GATTCAGGATTTGCTCGATGTGTCACGTATCGCTGCCGGTGGTCTGCGGCTGGAACGGAGTGATGTGGCGCTCCATCTGC TGGTCTCAGATGTTGTGCGCCGTTTTGCGGCACAGGTTGGCGAACGGATTGAATTTGAAATCCGGGTGCCTGATGATCTG CCCCCGGTCTACGCCGATTATGAACGGATGCGGCAGGTGTTGACCAATCTGATCGAGAATGCTGTGAAGTATAGTCCGAA CGGGGGGGTTATTCGTATCGGCGCCCGTGCCGAGGGCGATATGGCCATCGTCTATGTGTCTGATCAGGGTATCGGTATTC CCCCTGAAGAGCAAGACCTGATCTTCGAGCGCTTTTATCGGGTCGATACACGCCTGCGCCGCGATCAACCCGGTAGTGGG CTGGGGCTGTTTATTACCCGTGCGATTGTTGAGGCGCATGGCGGTCGGATTTGGGTTGAAAGTCAGGTTGGTCGTGGGTC GCGATTCTTCTTTACCATCCCCCTCAGTCGACGGCAATTGCCCGGCGAATAG
Upstream 100 bases:
>100_bases AGAATGTTTGACAATGGTATTGTAGATCGGTTTAGTATGGTGTAAATGTTTACACATGTGAGTATAATCATCAACGTTCT TTTGCCGGTTCTGTGGTACA
Downstream 100 bases:
>100_bases CGATCCGTTCGGGTATCGGTTTGCGATTGTGCGTTGGGTTCATCACGTAAAGCTGGAACAGATGGACGTATGTTGAATTG ACGATAACACCGGTGGTTAT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MSQMTDLRLRQREYLLQISRALTAQLDLGSVLNLVITYAVELLAGTLGFIALFDEEDGVLRIRASAQLPRELWPAFAPLL RIPIADLGRYGPQVLRDVSLDAGIPLRQMIALPLTVRDTPLGVIYVFRAALNVAFSADDRQILQDFADQAAIAVGNARLF QSVLREKQHLNALIEQSADGVMIIDGRWRITTFNHTMEQLTGWSREEAIGRPCAEVLGIRNAHGVNICLNECPLQRRPDL ANPVVEGWITTRDGRDLFIQNRYAPQRGSHGQLLSAIANVRDITAQKMEEERQNTFISVISHELRTPVSIIKGFAETMLR PDGQFTVEQYREALQVISEEADRLARQIQDLLDVSRIAAGGLRLERSDVALHLLVSDVVRRFAAQVGERIEFEIRVPDDL PPVYADYERMRQVLTNLIENAVKYSPNGGVIRIGARAEGDMAIVYVSDQGIGIPPEEQDLIFERFYRVDTRLRRDQPGSG LGLFITRAIVEAHGGRIWVESQVGRGSRFFFTIPLSRRQLPGE
Sequences:
>Translated_523_residues MSQMTDLRLRQREYLLQISRALTAQLDLGSVLNLVITYAVELLAGTLGFIALFDEEDGVLRIRASAQLPRELWPAFAPLL RIPIADLGRYGPQVLRDVSLDAGIPLRQMIALPLTVRDTPLGVIYVFRAALNVAFSADDRQILQDFADQAAIAVGNARLF QSVLREKQHLNALIEQSADGVMIIDGRWRITTFNHTMEQLTGWSREEAIGRPCAEVLGIRNAHGVNICLNECPLQRRPDL ANPVVEGWITTRDGRDLFIQNRYAPQRGSHGQLLSAIANVRDITAQKMEEERQNTFISVISHELRTPVSIIKGFAETMLR PDGQFTVEQYREALQVISEEADRLARQIQDLLDVSRIAAGGLRLERSDVALHLLVSDVVRRFAAQVGERIEFEIRVPDDL PPVYADYERMRQVLTNLIENAVKYSPNGGVIRIGARAEGDMAIVYVSDQGIGIPPEEQDLIFERFYRVDTRLRRDQPGSG LGLFITRAIVEAHGGRIWVESQVGRGSRFFFTIPLSRRQLPGE >Mature_522_residues SQMTDLRLRQREYLLQISRALTAQLDLGSVLNLVITYAVELLAGTLGFIALFDEEDGVLRIRASAQLPRELWPAFAPLLR IPIADLGRYGPQVLRDVSLDAGIPLRQMIALPLTVRDTPLGVIYVFRAALNVAFSADDRQILQDFADQAAIAVGNARLFQ SVLREKQHLNALIEQSADGVMIIDGRWRITTFNHTMEQLTGWSREEAIGRPCAEVLGIRNAHGVNICLNECPLQRRPDLA NPVVEGWITTRDGRDLFIQNRYAPQRGSHGQLLSAIANVRDITAQKMEEERQNTFISVISHELRTPVSIIKGFAETMLRP DGQFTVEQYREALQVISEEADRLARQIQDLLDVSRIAAGGLRLERSDVALHLLVSDVVRRFAAQVGERIEFEIRVPDDLP PVYADYERMRQVLTNLIENAVKYSPNGGVIRIGARAEGDMAIVYVSDQGIGIPPEEQDLIFERFYRVDTRLRRDQPGSGL GLFITRAIVEAHGGRIWVESQVGRGSRFFFTIPLSRRQLPGE
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=361, Percent_Identity=32.1329639889197, Blast_Score=138, Evalue=9e-34, Organism=Escherichia coli, GI1786600, Length=248, Percent_Identity=34.6774193548387, Blast_Score=131, Evalue=8e-32, Organism=Escherichia coli, GI1789149, Length=248, Percent_Identity=35.4838709677419, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1788549, Length=368, Percent_Identity=29.8913043478261, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1786912, Length=234, Percent_Identity=32.9059829059829, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI145693157, Length=280, Percent_Identity=28.5714285714286, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=33.1818181818182, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786783, Length=223, Percent_Identity=32.7354260089686, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788713, Length=258, Percent_Identity=31.0077519379845, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1788393, Length=287, Percent_Identity=28.5714285714286, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI87081816, Length=277, Percent_Identity=30.3249097472924, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1790346, Length=238, Percent_Identity=30.2521008403361, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1790300, Length=369, Percent_Identity=26.0162601626016, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI87082128, Length=229, Percent_Identity=27.9475982532751, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1787894, Length=225, Percent_Identity=29.7777777777778, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788279, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1789808, Length=222, Percent_Identity=27.9279279279279, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787374, Length=262, Percent_Identity=26.3358778625954, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790861, Length=207, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 58759; Mature: 58628
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMTDLRLRQREYLLQISRALTAQLDLGSVLNLVITYAVELLAGTLGFIALFDEEDGVL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEE RIRASAQLPRELWPAFAPLLRIPIADLGRYGPQVLRDVSLDAGIPLRQMIALPLTVRDTP EEEECCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHHHCCCEECCCC LGVIYVFRAALNVAFSADDRQILQDFADQAAIAVGNARLFQSVLREKQHLNALIEQSADG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHCCCCC VMIIDGRWRITTFNHTMEQLTGWSREEAIGRPCAEVLGIRNAHGVNICLNECPLQRRPDL EEEECCEEEEEEHHHHHHHHCCCCHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCCCC ANPVVEGWITTRDGRDLFIQNRYAPQRGSHGQLLSAIANVRDITAQKMEEERQNTFISVI CCHHHHCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHELRTPVSIIKGFAETMLRPDGQFTVEQYREALQVISEEADRLARQIQDLLDVSRIAAG HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLRLERSDVALHLLVSDVVRRFAAQVGERIEFEIRVPDDLPPVYADYERMRQVLTNLIEN CCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCHHHHHHHHHHHHHH AVKYSPNGGVIRIGARAEGDMAIVYVSDQGIGIPPEEQDLIFERFYRVDTRLRRDQPGSG HHEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC LGLFITRAIVEAHGGRIWVESQVGRGSRFFFTIPLSRRQLPGE HHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure SQMTDLRLRQREYLLQISRALTAQLDLGSVLNLVITYAVELLAGTLGFIALFDEEDGVL CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEE RIRASAQLPRELWPAFAPLLRIPIADLGRYGPQVLRDVSLDAGIPLRQMIALPLTVRDTP EEEECCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHCCCCCCCCHHHHHHCCCEECCCC LGVIYVFRAALNVAFSADDRQILQDFADQAAIAVGNARLFQSVLREKQHLNALIEQSADG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHCCCCC VMIIDGRWRITTFNHTMEQLTGWSREEAIGRPCAEVLGIRNAHGVNICLNECPLQRRPDL EEEECCEEEEEEHHHHHHHHCCCCHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCCCCCC ANPVVEGWITTRDGRDLFIQNRYAPQRGSHGQLLSAIANVRDITAQKMEEERQNTFISVI CCHHHHCEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHELRTPVSIIKGFAETMLRPDGQFTVEQYREALQVISEEADRLARQIQDLLDVSRIAAG HHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLRLERSDVALHLLVSDVVRRFAAQVGERIEFEIRVPDDLPPVYADYERMRQVLTNLIEN CCEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCHHHHHHHHHHHHHH AVKYSPNGGVIRIGARAEGDMAIVYVSDQGIGIPPEEQDLIFERFYRVDTRLRRDQPGSG HHEECCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC LGLFITRAIVEAHGGRIWVESQVGRGSRFFFTIPLSRRQLPGE HHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]