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The map label for this gene is 222525467

Identifier: 222525467

GI number: 222525467

Start: 2808766

End: 2808993

Strand: Direct

Name: 222525467

Synonym: Chy400_2215

Alternate gene names: NA

Gene position: 2808766-2808993 (Clockwise)

Preceding gene: 222525466

Following gene: 222525468

Centisome position: 53.31

GC content: 51.75

Gene sequence:

>228_bases
ATGAAGGCGCTCCTCGAATATATCGCTCGTAATCTGGTTGATACGCCTGAAGCGGTTCGCATCAAGGAACGTAGTGGGCG
TTTCACGATCACGTATCATTTGTCGGTTGCACCATCCGAAACCGGCAAAGTCATTGGGCGCAATGGACGGGTGGCAAAGG
CAATTCGCGATCTGATGGGTGTTGCAGCAGCCCGTCAAAAGAAGCGAGTACACGTCGATATCGAGTAA

Upstream 100 bases:

>100_bases
CCGACTGAAGTTGTGGTGAAGCTACTGAAGCGGGTCAATGTACTCGACGAGCAGGGTAAGGTCATTGCCGAAGCCTAGTC
CTACAGTGGAGGGAGCTTCA

Downstream 100 bases:

>100_bases
GTCGGTAGACATCGGCAACCGGTCGGCCATCCGCGCCGATCGGTTGCTTTGTTGTGGGTTGTTATGGACGATCTGCTCTA
TATTGGTGCTCTTGGTGCGC

Product: RNA-binding protein (contains KH domain)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKALLEYIARNLVDTPEAVRIKERSGRFTITYHLSVAPSETGKVIGRNGRVAKAIRDLMGVAAARQKKRVHVDIE

Sequences:

>Translated_75_residues
MKALLEYIARNLVDTPEAVRIKERSGRFTITYHLSVAPSETGKVIGRNGRVAKAIRDLMGVAAARQKKRVHVDIE
>Mature_75_residues
MKALLEYIARNLVDTPEAVRIKERSGRFTITYHLSVAPSETGKVIGRNGRVAKAIRDLMGVAAARQKKRVHVDIE

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8373; Mature: 8373

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLEYIARNLVDTPEAVRIKERSGRFTITYHLSVAPSETGKVIGRNGRVAKAIRDLMG
CHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEECCCCCCCEECCCCCHHHHHHHHHH
VAAARQKKRVHVDIE
HHHHHCCCCEEEECC
>Mature Secondary Structure
MKALLEYIARNLVDTPEAVRIKERSGRFTITYHLSVAPSETGKVIGRNGRVAKAIRDLMG
CHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEEECCCCCCCEECCCCCHHHHHHHHHH
VAAARQKKRVHVDIE
HHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]