Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is yvdM [H]

Identifier: 222525432

GI number: 222525432

Start: 2758626

End: 2759288

Strand: Reverse

Name: yvdM [H]

Synonym: Chy400_2177

Alternate gene names: 222525432

Gene position: 2759288-2758626 (Counterclockwise)

Preceding gene: 222525433

Following gene: 222525431

Centisome position: 52.37

GC content: 58.67

Gene sequence:

>663_bases
ATGACAATTCAAGGGTTCATCTTCGATCTCGATGGTGTACTCACCGATACCGCTGAATACCATTATCGGGCCTGGAAGCG
GCTGGCCGACGAACTTGGCATTCCGTTCACGCGCGAGGAGAACGAAGCGCTGCGTGGCATCCCCCGCCGCGAGTCGCTGC
TCCTTCTGCTCAAGGGGCGCACCTACCCAGAAGCGGTACTCAGCGAACTTATGGATCGCAAGAACGGCTACTATCTTGAG
TTTATTCGCGAACTATCACCACGCGATGTGTTACCGGGCGCACGCGAACTGTTGCAAGAGATTCGGGCTGCCGGGTTGAA
GACAGCACTCGGCTCGGCGAGCAAAAATGCGCGTGAGGTGATAGAGCGGCTGGGCATCGCCGAATTGTTCGATGCCGTTG
CCGATGGCTATAGTGTCACCCGCCAGAAACCGGCGCCTGATCTCTTCCTTCACGCCGCCGCACTCCTCAACCTGCCGCCA
TCTGCGTGTGTGGTTGTAGAGGATGCTGAAGCCGGCGTAGAAGCAGCGCTGGCGGGTGGATTTTACGTGGTGGGAATTGG
GCCTCAGGAACGGGTAGGGCGCGCGCACATCGTGCTTCCGAGTCTGGCGGAGGCGCGATTGAGTGATCTGTGTCAGCAAC
TACTGCACTATGCAGCGGACTGA

Upstream 100 bases:

>100_bases
GTTACACCACTGCGTAACCAACAGCAGGAGTGCAATCCCCACCATTGCACTCCTGTTTGTTAATAGTTGTTTCACAAATG
TGAACTAAAGGAATAGCTTT

Downstream 100 bases:

>100_bases
GTTCTGGTCTCAAACACCCGCTTAGCACATACCGACTCCGCAGAGGATTTCGTGCTGTGAAGCCTGTTTCCAGCCTGCCA
GACCTGGCGGGCTGGAAACC

Product: beta-phosphoglucomutase

Products: NA

Alternate protein names: Beta-PGM [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGRTYPEAVLSELMDRKNGYYLE
FIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREVIERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPP
SACVVVEDAEAGVEAALAGGFYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD

Sequences:

>Translated_220_residues
MTIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGRTYPEAVLSELMDRKNGYYLE
FIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREVIERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPP
SACVVVEDAEAGVEAALAGGFYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD
>Mature_219_residues
TIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGRTYPEAVLSELMDRKNGYYLEF
IRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREVIERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPPS
ACVVVEDAEAGVEAALAGGFYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD

Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=214, Percent_Identity=28.0373831775701, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1787576, Length=221, Percent_Identity=41.6289592760181, Blast_Score=157, Evalue=4e-40,
Organism=Escherichia coli, GI1789046, Length=185, Percent_Identity=31.3513513513514, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082080, Length=218, Percent_Identity=34.4036697247706, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788021, Length=214, Percent_Identity=28.5046728971963, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116008157, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17137324, Length=212, Percent_Identity=28.3018867924528, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010976
- InterPro:   IPR010972
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =5.4.2.6 [H]

Molecular weight: Translated: 24171; Mature: 24040

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGR
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHEEEEECCC
TYPEAVLSELMDRKNGYYLEFIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREV
CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPPSACVVVEDAEAGVEAALAGG
HHHHCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHCHHHHHCCC
FYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD
EEEEECCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGR
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHEEEEECCC
TYPEAVLSELMDRKNGYYLEFIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREV
CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPPSACVVVEDAEAGVEAALAGG
HHHHCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHCHHHHHCCC
FYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD
EEEEECCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]