| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yvdM [H]
Identifier: 222525432
GI number: 222525432
Start: 2758626
End: 2759288
Strand: Reverse
Name: yvdM [H]
Synonym: Chy400_2177
Alternate gene names: 222525432
Gene position: 2759288-2758626 (Counterclockwise)
Preceding gene: 222525433
Following gene: 222525431
Centisome position: 52.37
GC content: 58.67
Gene sequence:
>663_bases ATGACAATTCAAGGGTTCATCTTCGATCTCGATGGTGTACTCACCGATACCGCTGAATACCATTATCGGGCCTGGAAGCG GCTGGCCGACGAACTTGGCATTCCGTTCACGCGCGAGGAGAACGAAGCGCTGCGTGGCATCCCCCGCCGCGAGTCGCTGC TCCTTCTGCTCAAGGGGCGCACCTACCCAGAAGCGGTACTCAGCGAACTTATGGATCGCAAGAACGGCTACTATCTTGAG TTTATTCGCGAACTATCACCACGCGATGTGTTACCGGGCGCACGCGAACTGTTGCAAGAGATTCGGGCTGCCGGGTTGAA GACAGCACTCGGCTCGGCGAGCAAAAATGCGCGTGAGGTGATAGAGCGGCTGGGCATCGCCGAATTGTTCGATGCCGTTG CCGATGGCTATAGTGTCACCCGCCAGAAACCGGCGCCTGATCTCTTCCTTCACGCCGCCGCACTCCTCAACCTGCCGCCA TCTGCGTGTGTGGTTGTAGAGGATGCTGAAGCCGGCGTAGAAGCAGCGCTGGCGGGTGGATTTTACGTGGTGGGAATTGG GCCTCAGGAACGGGTAGGGCGCGCGCACATCGTGCTTCCGAGTCTGGCGGAGGCGCGATTGAGTGATCTGTGTCAGCAAC TACTGCACTATGCAGCGGACTGA
Upstream 100 bases:
>100_bases GTTACACCACTGCGTAACCAACAGCAGGAGTGCAATCCCCACCATTGCACTCCTGTTTGTTAATAGTTGTTTCACAAATG TGAACTAAAGGAATAGCTTT
Downstream 100 bases:
>100_bases GTTCTGGTCTCAAACACCCGCTTAGCACATACCGACTCCGCAGAGGATTTCGTGCTGTGAAGCCTGTTTCCAGCCTGCCA GACCTGGCGGGCTGGAAACC
Product: beta-phosphoglucomutase
Products: NA
Alternate protein names: Beta-PGM [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGRTYPEAVLSELMDRKNGYYLE FIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREVIERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPP SACVVVEDAEAGVEAALAGGFYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD
Sequences:
>Translated_220_residues MTIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGRTYPEAVLSELMDRKNGYYLE FIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREVIERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPP SACVVVEDAEAGVEAALAGGFYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD >Mature_219_residues TIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGRTYPEAVLSELMDRKNGYYLEF IRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREVIERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPPS ACVVVEDAEAGVEAALAGGFYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD
Specific function: Reversible transformation of glucose 6-phosphate and beta-glucose 1-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=214, Percent_Identity=28.0373831775701, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1787576, Length=221, Percent_Identity=41.6289592760181, Blast_Score=157, Evalue=4e-40, Organism=Escherichia coli, GI1789046, Length=185, Percent_Identity=31.3513513513514, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87082080, Length=218, Percent_Identity=34.4036697247706, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1788021, Length=214, Percent_Identity=28.5046728971963, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI116008157, Length=212, Percent_Identity=28.3018867924528, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI17137324, Length=212, Percent_Identity=28.3018867924528, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010976 - InterPro: IPR010972 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =5.4.2.6 [H]
Molecular weight: Translated: 24171; Mature: 24040
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGR CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHEEEEECCC TYPEAVLSELMDRKNGYYLEFIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREV CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPPSACVVVEDAEAGVEAALAGG HHHHCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHCHHHHHCCC FYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD EEEEECCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIQGFIFDLDGVLTDTAEYHYRAWKRLADELGIPFTREENEALRGIPRRESLLLLLKGR CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHEEEEECCC TYPEAVLSELMDRKNGYYLEFIRELSPRDVLPGARELLQEIRAAGLKTALGSASKNAREV CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IERLGIAELFDAVADGYSVTRQKPAPDLFLHAAALLNLPPSACVVVEDAEAGVEAALAGG HHHHCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHCHHHHHCCC FYVVGIGPQERVGRAHIVLPSLAEARLSDLCQQLLHYAAD EEEEECCCHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]