| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525374
Identifier: 222525374
GI number: 222525374
Start: 2693279
End: 2694508
Strand: Reverse
Name: 222525374
Synonym: Chy400_2119
Alternate gene names: NA
Gene position: 2694508-2693279 (Counterclockwise)
Preceding gene: 222525375
Following gene: 222525371
Centisome position: 51.14
GC content: 44.96
Gene sequence:
>1230_bases ATGTTTAGTACGCACTCTAATACGTATTCCCATCGTTTTTGGGGAGACGACGAGTCAAGAAAGCATATAAAAAGACTATA TCATATTACTCACATTGACAACCTTGCATCTATTTTGCAATACGGCATTCTCTCACACCGGCAGGTTGAATCCCAGAACG TCTCGTTTACGCCGATTTATAATGAGAACATCGTTCACAATCGAAAAGAACGCTTAACTCCGGATCAGAGAAGTTTATGG GATTATGCCAATCTCTATTTCCAACCGCGCAATCCTATGCTTTACAAGGTGTTAAGCGAAAAGAGTACAAGAGAAATAGT CATACTAGGGGTCAAACCACAAGTCTTAGATACAAAAGGTGCATTTATTGCGCTTGGTAATGCTGCACACTCACAGACCG AAATCGTGGATGTCGCAACGGGTCGGAAAGTCATTACTGGTGAATTCTGGCCAATTATACACAGTGACTGGTGGAAACCC GAAGACGGTACGAAGCGCAAAATAATGGCCGAATGCCTTATACCACATGTGATTGTGCCAGAGGCAATCCACTCGATCTT TGTAGCGCACCCCAGCGTTGCAGATACAGTGCGTAGTATTATTGCCGAGATTCCTTGTCCAGTAGAAGTAGTTACAGAAC CACACCTGTTTTTCCAACCCAACCGCCAGGGCAGATTGACCGAAAAACTATCCTGGGTTGATGGCGATATGTTCTTTTCC AAGATGCAAACGCTCACGATCAGTGTCAATACAGTAGGAGTTATGGGGAAAGGTCTGGCTTCACGCGCCAAATACCAGTT TCCCGATGTGTATGTCATCTATCAGGATGTATGTAAAAATGGCACGTTGCAGATGGGTAAGCCATACCTTTACAAACGTG AAGGATCGTTGGATGAAGATTTGGCAGATGAGCCATTGAGCTTACCTCATCCGAATGCCAGTAAGTGGTTTTTACTTTTC CCAACCAAACGGCATTGGAAAGAGCGATCTGACCGGGAAGGGATAGAAAAGGGCTTACAGTGGCTGGTATCTCATTACAG GGATGAGGGAATTCAATCTATAGCTATCCCTGCCTTGGGATGCGGGTTGGGTGGGTTAGACTGGAAAGAGATGGGGCCAC TGATATGCAGGTATATGGTGCAGATGGATATTCAAAGCTGCATTTATCTGCCTCAAGAGCAAAACATCCCACTCGAATTG TTGACCAGCGAATTTTTGCTGGGAACCTGA
Upstream 100 bases:
>100_bases AGCCTGAATAGAAGCGCTTGAGAATGCAAATCTTTAAGCGCTTCTACGAATTTACCCATTATGCAAGAGTACAGACGTAT ATCAAATCTGGTGCGATGAG
Downstream 100 bases:
>100_bases ATTTTGTTACCGGTACAATCCTGAAAGGCAGGTGTATTAGAAACCGGTTTGCTGACATACTGTCGTTCTACTGAACCTTT GGAGTATTGTTAGAGTACGG
Product: Appr-1-p processing domain-containing protein
Products: NA
Alternate protein names: Appr-1-P Processing Domain Protein; Appr-1-P Processing Family Protein; Appr-1-P Processing Protein; Appr-1-P Processing; Appr-1-P Processing Family
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MFSTHSNTYSHRFWGDDESRKHIKRLYHITHIDNLASILQYGILSHRQVESQNVSFTPIYNENIVHNRKERLTPDQRSLW DYANLYFQPRNPMLYKVLSEKSTREIVILGVKPQVLDTKGAFIALGNAAHSQTEIVDVATGRKVITGEFWPIIHSDWWKP EDGTKRKIMAECLIPHVIVPEAIHSIFVAHPSVADTVRSIIAEIPCPVEVVTEPHLFFQPNRQGRLTEKLSWVDGDMFFS KMQTLTISVNTVGVMGKGLASRAKYQFPDVYVIYQDVCKNGTLQMGKPYLYKREGSLDEDLADEPLSLPHPNASKWFLLF PTKRHWKERSDREGIEKGLQWLVSHYRDEGIQSIAIPALGCGLGGLDWKEMGPLICRYMVQMDIQSCIYLPQEQNIPLEL LTSEFLLGT
Sequences:
>Translated_409_residues MFSTHSNTYSHRFWGDDESRKHIKRLYHITHIDNLASILQYGILSHRQVESQNVSFTPIYNENIVHNRKERLTPDQRSLW DYANLYFQPRNPMLYKVLSEKSTREIVILGVKPQVLDTKGAFIALGNAAHSQTEIVDVATGRKVITGEFWPIIHSDWWKP EDGTKRKIMAECLIPHVIVPEAIHSIFVAHPSVADTVRSIIAEIPCPVEVVTEPHLFFQPNRQGRLTEKLSWVDGDMFFS KMQTLTISVNTVGVMGKGLASRAKYQFPDVYVIYQDVCKNGTLQMGKPYLYKREGSLDEDLADEPLSLPHPNASKWFLLF PTKRHWKERSDREGIEKGLQWLVSHYRDEGIQSIAIPALGCGLGGLDWKEMGPLICRYMVQMDIQSCIYLPQEQNIPLEL LTSEFLLGT >Mature_409_residues MFSTHSNTYSHRFWGDDESRKHIKRLYHITHIDNLASILQYGILSHRQVESQNVSFTPIYNENIVHNRKERLTPDQRSLW DYANLYFQPRNPMLYKVLSEKSTREIVILGVKPQVLDTKGAFIALGNAAHSQTEIVDVATGRKVITGEFWPIIHSDWWKP EDGTKRKIMAECLIPHVIVPEAIHSIFVAHPSVADTVRSIIAEIPCPVEVVTEPHLFFQPNRQGRLTEKLSWVDGDMFFS KMQTLTISVNTVGVMGKGLASRAKYQFPDVYVIYQDVCKNGTLQMGKPYLYKREGSLDEDLADEPLSLPHPNASKWFLLF PTKRHWKERSDREGIEKGLQWLVSHYRDEGIQSIAIPALGCGLGGLDWKEMGPLICRYMVQMDIQSCIYLPQEQNIPLEL LTSEFLLGT
Specific function: Unknown
COG id: COG2110
COG function: function code R; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46890; Mature: 46890
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS51154 MACRO
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSTHSNTYSHRFWGDDESRKHIKRLYHITHIDNLASILQYGILSHRQVESQNVSFTPIY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC NENIVHNRKERLTPDQRSLWDYANLYFQPRNPMLYKVLSEKSTREIVILGVKPQVLDTKG CCCCHHCHHHHCCCCHHHHHHHHHEEECCCCCHHHHHHCCCCCCEEEEEECCCCEECCCC AFIALGNAAHSQTEIVDVATGRKVITGEFWPIIHSDWWKPEDGTKRKIMAECLIPHVIVP CEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHH EAIHSIFVAHPSVADTVRSIIAEIPCPVEVVTEPHLFFQPNRQGRLTEKLSWVDGDMFFS HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCHHHHHHHCCHHHHHH KMQTLTISVNTVGVMGKGLASRAKYQFPDVYVIYQDVCKNGTLQMGKPYLYKREGSLDED HHEEEEEEEEECCHHCCCHHHHCCCCCCCEEEEEHHHHCCCCEECCCCEEEECCCCCCHH LADEPLSLPHPNASKWFLLFPTKRHWKERSDREGIEKGLQWLVSHYRDEGIQSIAIPALG HCCCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHH CGLGGLDWKEMGPLICRYMVQMDIQSCIYLPQEQNIPLELLTSEFLLGT CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MFSTHSNTYSHRFWGDDESRKHIKRLYHITHIDNLASILQYGILSHRQVESQNVSFTPIY CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC NENIVHNRKERLTPDQRSLWDYANLYFQPRNPMLYKVLSEKSTREIVILGVKPQVLDTKG CCCCHHCHHHHCCCCHHHHHHHHHEEECCCCCHHHHHHCCCCCCEEEEEECCCCEECCCC AFIALGNAAHSQTEIVDVATGRKVITGEFWPIIHSDWWKPEDGTKRKIMAECLIPHVIVP CEEEECCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHH EAIHSIFVAHPSVADTVRSIIAEIPCPVEVVTEPHLFFQPNRQGRLTEKLSWVDGDMFFS HHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCEEECCCCCCCHHHHHHHCCHHHHHH KMQTLTISVNTVGVMGKGLASRAKYQFPDVYVIYQDVCKNGTLQMGKPYLYKREGSLDED HHEEEEEEEEECCHHCCCHHHHCCCCCCCEEEEEHHHHCCCCEECCCCEEEECCCCCCHH LADEPLSLPHPNASKWFLLFPTKRHWKERSDREGIEKGLQWLVSHYRDEGIQSIAIPALG HCCCCCCCCCCCCCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHH CGLGGLDWKEMGPLICRYMVQMDIQSCIYLPQEQNIPLELLTSEFLLGT CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA