| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525345
Identifier: 222525345
GI number: 222525345
Start: 2660893
End: 2661879
Strand: Direct
Name: 222525345
Synonym: Chy400_2090
Alternate gene names: NA
Gene position: 2660893-2661879 (Clockwise)
Preceding gene: 222525344
Following gene: 222525349
Centisome position: 50.5
GC content: 58.36
Gene sequence:
>987_bases ATGATCGGGTTTGTCGCTGCTGCCATCCTCAGCTTTGTACCGGCATTCATCTACGCTGCAATTGCCTACTGGCTCGACCG GTTTGAGAAAGAGCCACGCCGGTTATTGTTTGGGGCATTCATCTGGGGTGCATTTGTCGCAACTCTTGGCGCCATCGTCT GGACAGGGCTGGCGCAGGTCTCGCTGGCCATCTTCATTGGGGAAGCCTCTGCTGAAGTTGCCGGCACAACCCTGCTGGCG CCGCTGGTAGAGGAGAGTCTGAAGGGGATTGCCGTTGTCATTATCATGCTCGCCTTCCCCGAAGAGTTCGACTCGCGGCT CGATGGGATGCTGTACGCCGCCATCACCGCATTAGGCTTTGCCGCCACTGAAAACCTGCTCTACCTCTACTTCATGGGCT ATCAGGAGAGTGGGGTTGGCGGTTTAATCTCCCTCTTCATCTTGCGCGTCATTCTCGGCGGATGGGGCCACGCTGTGTAT ACTGCCTGGATCGGCCTGGGGCTGGCGATGTCGCGGCTGCACCCGAACCGCTTTATTCGTTTCATTTCCCCCTTTGCCGG TTGGCTGCTGGCTGTCTGCCTGCACGCTCTCCACAACACCATGGCCGTATTCCTGGCCGGTGAGTTTGGCCTCACCGGAC TCGGCCTGACGTTACTGGTCGACTGGTCGTTCTGGATCGTTGTCCTCGGCCTGGTGATCTGGGAGATTCGGCGCGAGCAG CATCACATCGCTACCTACCTGGCAGAAGAGGTGATGGCCGGCATTATTGCACCGGGTCATTACAATGCTGCGAAATCATT CAGTGGTCAGCTCCGCAACCGGCTACGCAACGCCACCGCTAGTCGTTTCTACGAAGCCTGCGCAGAACTGGCGCATAAAA AGCATCACCTGGCAACCGGTGTTGGTGATGAGCGCAACACGATTGCCCGCATCAACCAGCTTCGCCGCGAACTGGCCCAA CTGGCCCCGAAAGTGCCGGCAGTCTAG
Upstream 100 bases:
>100_bases AGATCGAGGCTCTGTTCAAAGCGTTCGGGCGGGCACTCGATGCCGCTACCCGCATTGATGCGCGTTTAGGGGGAACCATA CCGAGCACGAAGGGTGTCCT
Downstream 100 bases:
>100_bases AACCTATTTCAAAATTCGGTCAATACACCACAAAATGATAGCAACGAGACAAAACGCACGGTAGATATGCAGATGACGGT CATAGCGCACCACCAACCGA
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MIGFVAAAILSFVPAFIYAAIAYWLDRFEKEPRRLLFGAFIWGAFVATLGAIVWTGLAQVSLAIFIGEASAEVAGTTLLA PLVEESLKGIAVVIIMLAFPEEFDSRLDGMLYAAITALGFAATENLLYLYFMGYQESGVGGLISLFILRVILGGWGHAVY TAWIGLGLAMSRLHPNRFIRFISPFAGWLLAVCLHALHNTMAVFLAGEFGLTGLGLTLLVDWSFWIVVLGLVIWEIRREQ HHIATYLAEEVMAGIIAPGHYNAAKSFSGQLRNRLRNATASRFYEACAELAHKKHHLATGVGDERNTIARINQLRRELAQ LAPKVPAV
Sequences:
>Translated_328_residues MIGFVAAAILSFVPAFIYAAIAYWLDRFEKEPRRLLFGAFIWGAFVATLGAIVWTGLAQVSLAIFIGEASAEVAGTTLLA PLVEESLKGIAVVIIMLAFPEEFDSRLDGMLYAAITALGFAATENLLYLYFMGYQESGVGGLISLFILRVILGGWGHAVY TAWIGLGLAMSRLHPNRFIRFISPFAGWLLAVCLHALHNTMAVFLAGEFGLTGLGLTLLVDWSFWIVVLGLVIWEIRREQ HHIATYLAEEVMAGIIAPGHYNAAKSFSGQLRNRLRNATASRFYEACAELAHKKHHLATGVGDERNTIARINQLRRELAQ LAPKVPAV >Mature_328_residues MIGFVAAAILSFVPAFIYAAIAYWLDRFEKEPRRLLFGAFIWGAFVATLGAIVWTGLAQVSLAIFIGEASAEVAGTTLLA PLVEESLKGIAVVIIMLAFPEEFDSRLDGMLYAAITALGFAATENLLYLYFMGYQESGVGGLISLFILRVILGGWGHAVY TAWIGLGLAMSRLHPNRFIRFISPFAGWLLAVCLHALHNTMAVFLAGEFGLTGLGLTLLVDWSFWIVVLGLVIWEIRREQ HHIATYLAEEVMAGIIAPGHYNAAKSFSGQLRNRLRNATASRFYEACAELAHKKHHLATGVGDERNTIARINQLRRELAQ LAPKVPAV
Specific function: Unknown
COG id: COG2339
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35964; Mature: 35964
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGFVAAAILSFVPAFIYAAIAYWLDRFEKEPRRLLFGAFIWGAFVATLGAIVWTGLAQV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAIFIGEASAEVAGTTLLAPLVEESLKGIAVVIIMLAFPEEFDSRLDGMLYAAITALGF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AATENLLYLYFMGYQESGVGGLISLFILRVILGGWGHAVYTAWIGLGLAMSRLHPNRFIR HHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHH FISPFAGWLLAVCLHALHNTMAVFLAGEFGLTGLGLTLLVDWSFWIVVLGLVIWEIRREQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHIATYLAEEVMAGIIAPGHYNAAKSFSGQLRNRLRNATASRFYEACAELAHKKHHLATG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VGDERNTIARINQLRRELAQLAPKVPAV CCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIGFVAAAILSFVPAFIYAAIAYWLDRFEKEPRRLLFGAFIWGAFVATLGAIVWTGLAQV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAIFIGEASAEVAGTTLLAPLVEESLKGIAVVIIMLAFPEEFDSRLDGMLYAAITALGF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AATENLLYLYFMGYQESGVGGLISLFILRVILGGWGHAVYTAWIGLGLAMSRLHPNRFIR HHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHH FISPFAGWLLAVCLHALHNTMAVFLAGEFGLTGLGLTLLVDWSFWIVVLGLVIWEIRREQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHIATYLAEEVMAGIIAPGHYNAAKSFSGQLRNRLRNATASRFYEACAELAHKKHHLATG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VGDERNTIARINQLRRELAQLAPKVPAV CCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA