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The map label for this gene is chvE [H]

Identifier: 222525335

GI number: 222525335

Start: 2643173

End: 2644336

Strand: Direct

Name: chvE [H]

Synonym: Chy400_2078

Alternate gene names: 222525335

Gene position: 2643173-2644336 (Clockwise)

Preceding gene: 222525333

Following gene: 222525336

Centisome position: 50.17

GC content: 57.99

Gene sequence:

>1164_bases
ATGTCGAAGAAGACGTTCGGGTTGTTGCTGTCTCTGTTGACAGCCATTGCATTCCTTTTGTCTGCATGTGGCAGTGGTGG
CAGCACCGGTGGCAACACTGGTGGGAGTACGGGTGGTAGCACCGGTGGGAGCACCGGCAATACGCAGCAGCTTGCGGTTG
GGATTGTCCTTCCTACTAAAGATGAACCCCGCTGGATCCAGGATGAGACACGCTTCCGCGAAGCATTGCAGCAGGCCGGT
TATCAGGTTGAGATTCTCTTCAGCCAGGGTTCGTCGGCTAAGGAGAAGGAGAACGTTGAGGCATTGATCGCCAAGGGCAT
TAAGGTCCTGATCATCTGCCCTCACGATGGTACGGCGGCAGCGGCGGCGGCTGAAGCTGCGCGGGCGGCTGGCGTGAAGG
TGATCTCCTACGACCGCCTGATCCGCGAGACTGATGCGGTTGATTACTACGTCACCTTCGATAGCATTGCTGTGGGCGCA
CAACAGGCGCAGTATCTGGTTGATCACGCCAGCGGTACCGGTAATCCGCTCTACCTGTATGCCGGTGCAGCCTCAGACAA
CAATGCCTTCCTCTTCTTCGAGGGTGCCTGGAAAGTCTTGCAACCCAAGATTGCCGACGGCACATTCGTGATCAAGAATT
CGAGCGAGGCGGTTGCCCTCCAGAACAAGCTCGACCTCACCCGCGACGAGATGGCGAAGATCATCGGTCAGGTGACCACC
AACTGGGATTTCAACACCGCCAAGAATCTGGCCGAGGCAAACCTGACTGCGGCGACCGCTGCTGACAAGGGCAAAGTCTA
CATCCTGGCCCCGAACGACGGTACCGCCCGTGCAATCGCCGATGCCTTCGCTGCTGATAAGGATGTCACCGAGTACTTTG
TCACCGGTCAGGATGCTGAGAAGGCTTCTGTGCAATACATCATCGATGGCCGCCAGTCGATGACCGTGTTCAAGGACGTG
CGCACGCTGGTGCAAGACGCTATCAAGGCAGCGGTTGCACTCCTTCAGGATCAGCAGCCCGAAGCCCGTGGCACTTACAA
CAACGGCAAGAAGGACGTCCCCGCCATTCAATCGCCGGTAGTGACGGTCACGCGCGACAACGTGCGCGCAGCCCTGATTG
ACTCCGGCTACTACAGCGCCAGCGACTTCACCAATCTGCCCTAA

Upstream 100 bases:

>100_bases
TACACACACAGGGAGGTGTACCGGCAGCAAACGATTTCTGCGTGTTGTGATCAGTGTTGTTCGCAATGAGTTGGGATGTT
TGTATTCAAGGAGGACTTTC

Downstream 100 bases:

>100_bases
AAGAATCTCTCTTCATAAAGACCGGGGTTGCCTGTTGCAATCCCGGTCTGTTAAATGATGCCAAAATTGCGGTAAACTTA
TGAAACACACTCCGGTAAAA

Product: periplasmic sugar-binding protein

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSKKTFGLLLSLLTAIAFLLSACGSGGSTGGNTGGSTGGSTGGSTGNTQQLAVGIVLPTKDEPRWIQDETRFREALQQAG
YQVEILFSQGSSAKEKENVEALIAKGIKVLIICPHDGTAAAAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGA
QQAQYLVDHASGTGNPLYLYAGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTRDEMAKIIGQVTT
NWDFNTAKNLAEANLTAATAADKGKVYILAPNDGTARAIADAFAADKDVTEYFVTGQDAEKASVQYIIDGRQSMTVFKDV
RTLVQDAIKAAVALLQDQQPEARGTYNNGKKDVPAIQSPVVTVTRDNVRAALIDSGYYSASDFTNLP

Sequences:

>Translated_387_residues
MSKKTFGLLLSLLTAIAFLLSACGSGGSTGGNTGGSTGGSTGGSTGNTQQLAVGIVLPTKDEPRWIQDETRFREALQQAG
YQVEILFSQGSSAKEKENVEALIAKGIKVLIICPHDGTAAAAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGA
QQAQYLVDHASGTGNPLYLYAGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTRDEMAKIIGQVTT
NWDFNTAKNLAEANLTAATAADKGKVYILAPNDGTARAIADAFAADKDVTEYFVTGQDAEKASVQYIIDGRQSMTVFKDV
RTLVQDAIKAAVALLQDQQPEARGTYNNGKKDVPAIQSPVVTVTRDNVRAALIDSGYYSASDFTNLP
>Mature_386_residues
SKKTFGLLLSLLTAIAFLLSACGSGGSTGGNTGGSTGGSTGGSTGNTQQLAVGIVLPTKDEPRWIQDETRFREALQQAGY
QVEILFSQGSSAKEKENVEALIAKGIKVLIICPHDGTAAAAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGAQ
QAQYLVDHASGTGNPLYLYAGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTRDEMAKIIGQVTTN
WDFNTAKNLAEANLTAATAADKGKVYILAPNDGTARAIADAFAADKDVTEYFVTGQDAEKASVQYIIDGRQSMTVFKDVR
TLVQDAIKAAVALLQDQQPEARGTYNNGKKDVPAIQSPVVTVTRDNVRAALIDSGYYSASDFTNLP

Specific function: Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Function as a periplasmic multiple sugar-binding receptor protein. It does not i

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=339, Percent_Identity=30.0884955752212, Blast_Score=152, Evalue=3e-38,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 40959; Mature: 40828

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTFGLLLSLLTAIAFLLSACGSGGSTGGNTGGSTGGSTGGSTGNTQQLAVGIVLPTK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
DEPRWIQDETRFREALQQAGYQVEILFSQGSSAKEKENVEALIAKGIKVLIICPHDGTAA
CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCHH
AAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGAQQAQYLVDHASGTGNPLYLY
HHHHHHHHHCCEEEEEHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEE
AGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTRDEMAKIIGQVTT
EECCCCCCEEEEECCCCCEECCEECCCEEEEECCCCEEEEHHHCCCCHHHHHHHHHHHCC
NWDFNTAKNLAEANLTAATAADKGKVYILAPNDGTARAIADAFAADKDVTEYFVTGQDAE
CCCCHHHHHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHEEEECCCCC
KASVQYIIDGRQSMTVFKDVRTLVQDAIKAAVALLQDQQPEARGTYNNGKKDVPAIQSPV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
VTVTRDNVRAALIDSGYYSASDFTNLP
EEEECCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SKKTFGLLLSLLTAIAFLLSACGSGGSTGGNTGGSTGGSTGGSTGNTQQLAVGIVLPTK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
DEPRWIQDETRFREALQQAGYQVEILFSQGSSAKEKENVEALIAKGIKVLIICPHDGTAA
CCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCHH
AAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGAQQAQYLVDHASGTGNPLYLY
HHHHHHHHHCCEEEEEHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEE
AGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTRDEMAKIIGQVTT
EECCCCCCEEEEECCCCCEECCEECCCEEEEECCCCEEEEHHHCCCCHHHHHHHHHHHCC
NWDFNTAKNLAEANLTAATAADKGKVYILAPNDGTARAIADAFAADKDVTEYFVTGQDAE
CCCCHHHHHHHHCCCEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHEEEECCCCC
KASVQYIIDGRQSMTVFKDVRTLVQDAIKAAVALLQDQQPEARGTYNNGKKDVPAIQSPV
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
VTVTRDNVRAALIDSGYYSASDFTNLP
EEEECCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8253785; 2156804; 11743193; 11743194 [H]