| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pyrR
Identifier: 222525300
GI number: 222525300
Start: 2589884
End: 2590432
Strand: Direct
Name: pyrR
Synonym: Chy400_2042
Alternate gene names: 222525300
Gene position: 2589884-2590432 (Clockwise)
Preceding gene: 222525299
Following gene: 222525301
Centisome position: 49.15
GC content: 57.56
Gene sequence:
>549_bases ATGGGAAATGAAAAACAGATTCTGTCGGCTGATGAGATTCGGCGGGCGCTGGTACGCATTGCGCACGAGATTGATGAACG CAATGGCGGTCTGCGCGATGTGGTTTTGGTTGGGATTCGGAGCCGTGGTGTGCCGCTGGCGGAGCGCATCGCAGCCGCAA TCGCCGATTTTGAAGGGACGCGCATACCGGTGGGGCAACTCGATATTACGCTCTACCGTGATGATTTGAAGCTGCGTGGG CCGGCGCCACGGGTGCGTAAGACCGATTTGCCGATTGATATTACCGGTAAGACGGTGGTGTTGGTGGACGATGTGCTGTT TACCGGTCGCACGGTGCGGGCAGCACTCGATGCGATTGCCGATCTGGGGCGTCCGGCCCGGATTCAGCTTGCTGTTCTGA TCGACCGTGGTCATCGTGAATTGCCGATTCGGGCCGATTTTGTGGGGAAGAATGTACCAACCTCGCTCTCCGAGAGGGTG ATGGTGCGTTTGCGCGAGACCGATGGGGTTGATGAGGTTGTGATTCTGCGAGGTTCTGCCAATGACTGA
Upstream 100 bases:
>100_bases ACGTCAGCGTGGCCCATATTATCGCTGTGTTTTTTCCCTGATCCCGCACCTGCGGGCAGGGATTTTTTGTTTGCGCAGTC CGTTCGCTGCGGAGGAACGC
Downstream 100 bases:
>100_bases ATTACGTCGTCATGCAATCGATCTCGATAACTTTAGTGCGACTGAGATCGAGGAGATTCTGGAAACGGCTGAGAGTATGC GCGAGGTGCTGAGCCGTGAA
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGNEKQILSADEIRRALVRIAHEIDERNGGLRDVVLVGIRSRGVPLAERIAAAIADFEGTRIPVGQLDITLYRDDLKLRG PAPRVRKTDLPIDITGKTVVLVDDVLFTGRTVRAALDAIADLGRPARIQLAVLIDRGHRELPIRADFVGKNVPTSLSERV MVRLRETDGVDEVVILRGSAND
Sequences:
>Translated_182_residues MGNEKQILSADEIRRALVRIAHEIDERNGGLRDVVLVGIRSRGVPLAERIAAAIADFEGTRIPVGQLDITLYRDDLKLRG PAPRVRKTDLPIDITGKTVVLVDDVLFTGRTVRAALDAIADLGRPARIQLAVLIDRGHRELPIRADFVGKNVPTSLSERV MVRLRETDGVDEVVILRGSAND >Mature_181_residues GNEKQILSADEIRRALVRIAHEIDERNGGLRDVVLVGIRSRGVPLAERIAAAIADFEGTRIPVGQLDITLYRDDLKLRGP APRVRKTDLPIDITGKTVVLVDDVLFTGRTVRAALDAIADLGRPARIQLAVLIDRGHRELPIRADFVGKNVPTSLSERVM VRLRETDGVDEVVILRGSAND
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYRR_CHLAA (A9WDU6)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001635494.1 - ProteinModelPortal: A9WDU6 - SMR: A9WDU6 - GeneID: 5826341 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_1890 - HOGENOM: HBG641958 - OMA: ILDITLY - ProtClustDB: CLSK974430 - GO: GO:0006350 - HAMAP: MF_01219 - InterPro: IPR000836 - InterPro: IPR023050
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.9
Molecular weight: Translated: 19995; Mature: 19864
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEKQILSADEIRRALVRIAHEIDERNGGLRDVVLVGIRSRGVPLAERIAAAIADFEGT CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCC RIPVGQLDITLYRDDLKLRGPAPRVRKTDLPIDITGKTVVLVDDVLFTGRTVRAALDAIA CCCCCCEEEEEEECCEEECCCCCCCCCCCCCEEECCCEEEEEECHHHCCHHHHHHHHHHH DLGRPARIQLAVLIDRGHRELPIRADFVGKNVPTSLSERVMVRLRETDGVDEVVILRGSA HCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHEEEECCCCCCCEEEEEECCC ND CC >Mature Secondary Structure GNEKQILSADEIRRALVRIAHEIDERNGGLRDVVLVGIRSRGVPLAERIAAAIADFEGT CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCC RIPVGQLDITLYRDDLKLRGPAPRVRKTDLPIDITGKTVVLVDDVLFTGRTVRAALDAIA CCCCCCEEEEEEECCEEECCCCCCCCCCCCCEEECCCEEEEEECHHHCCHHHHHHHHHHH DLGRPARIQLAVLIDRGHRELPIRADFVGKNVPTSLSERVMVRLRETDGVDEVVILRGSA HCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHEEEECCCCCCCEEEEEECCC ND CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA