| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525270
Identifier: 222525270
GI number: 222525270
Start: 2546119
End: 2546853
Strand: Direct
Name: 222525270
Synonym: Chy400_2010
Alternate gene names: NA
Gene position: 2546119-2546853 (Clockwise)
Preceding gene: 222525269
Following gene: 222525271
Centisome position: 48.32
GC content: 56.87
Gene sequence:
>735_bases GTGACAGCCGAACAAACAAATCAGGGTGTCTTCTCTCGTCGGAGTCTGATTAAGGGCATTGCCGGTATCGGTGGCGGTCT GGTTGTTGCCAGCTTCGCCAATCTGTTCGGGATTCAATCTGCCTCAGCCGGCCATGATCGCAAAGACGATCCACAGCTTA TTCTGAACCTGGCTGCAACAGCCGAGACACTGGCAACCACGTTCTACTACGCTGCGTTAACCTCAGCCCAATTCAAACTG CACGAAGAGGACATTCTCTACCTCAAGCTGGCCCTCGATGCCGAGAAGTACCACCTCGATTTTCTGGTCAGCAACGGTGG TCAGGCTTTGACCAATCAGTTCTATGTTCCGGCCAATTTGCTACGTGACCCGGCCCTCTTCGTTCAGGTCGGAGCAGATG CCGAGACCGCGTTTGTCGGAGCTTACCTTGCAGCCACACGCCGCTTTGCCGAATTGGGTGCTGATCGGCTGGCCGGCACC ACGGCCCAGCATGCGTGCAGCGAAGCGCAGCACCTGGCCTTGATCCGTGACATTGGCGGCTTTGCCCCGAACAACCTGCC CTTACCGCTACCGATTTACTACAACGTTTCTGATGCAGTGCCCACGCTGGCACCGTTCTTGCAAGGCGGTCAGGGCTTCA TCGGGCCGGTCACCGCACCCACTGCTGCTCAAATTGCGGCCGTTCTCGGTGGTGTGAAGTCCGATCCAACCCAACCCTAT ACCAGGGTATTCTAA
Upstream 100 bases:
>100_bases TTCCGATCCTGACATCCAAAATGGCAAAACCTTCGCACAGATAGATGAAGGCGCATGCACGGGCATGCACCAAACATCAT CTGAAAGCGGAGGTAAGACA
Downstream 100 bases:
>100_bases GCGCGTCGTGTCAGGCAGAGGCCGGGCCTGCCAGGGAGAGCATCTCCTGGCAGGCTTGTGTATGTTTAGCGGCTGCACAG GAGAGGGGAACAACTGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTAEQTNQGVFSRRSLIKGIAGIGGGLVVASFANLFGIQSASAGHDRKDDPQLILNLAATAETLATTFYYAALTSAQFKL HEEDILYLKLALDAEKYHLDFLVSNGGQALTNQFYVPANLLRDPALFVQVGADAETAFVGAYLAATRRFAELGADRLAGT TAQHACSEAQHLALIRDIGGFAPNNLPLPLPIYYNVSDAVPTLAPFLQGGQGFIGPVTAPTAAQIAAVLGGVKSDPTQPY TRVF
Sequences:
>Translated_244_residues MTAEQTNQGVFSRRSLIKGIAGIGGGLVVASFANLFGIQSASAGHDRKDDPQLILNLAATAETLATTFYYAALTSAQFKL HEEDILYLKLALDAEKYHLDFLVSNGGQALTNQFYVPANLLRDPALFVQVGADAETAFVGAYLAATRRFAELGADRLAGT TAQHACSEAQHLALIRDIGGFAPNNLPLPLPIYYNVSDAVPTLAPFLQGGQGFIGPVTAPTAAQIAAVLGGVKSDPTQPY TRVF >Mature_243_residues TAEQTNQGVFSRRSLIKGIAGIGGGLVVASFANLFGIQSASAGHDRKDDPQLILNLAATAETLATTFYYAALTSAQFKLH EEDILYLKLALDAEKYHLDFLVSNGGQALTNQFYVPANLLRDPALFVQVGADAETAFVGAYLAATRRFAELGADRLAGTT AQHACSEAQHLALIRDIGGFAPNNLPLPLPIYYNVSDAVPTLAPFLQGGQGFIGPVTAPTAAQIAAVLGGVKSDPTQPYT RVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25784; Mature: 25652
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEQTNQGVFSRRSLIKGIAGIGGGLVVASFANLFGIQSASAGHDRKDDPQLILNLAAT CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH AETLATTFYYAALTSAQFKLHEEDILYLKLALDAEKYHLDFLVSNGGQALTNQFYVPANL HHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCEEEEEEEEECCCHHHHCCEECCHHH LRDPALFVQVGADAETAFVGAYLAATRRFAELGADRLAGTTAQHACSEAQHLALIRDIGG HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCC FAPNNLPLPLPIYYNVSDAVPTLAPFLQGGQGFIGPVTAPTAAQIAAVLGGVKSDPTQPY CCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCH TRVF HCCC >Mature Secondary Structure TAEQTNQGVFSRRSLIKGIAGIGGGLVVASFANLFGIQSASAGHDRKDDPQLILNLAAT CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH AETLATTFYYAALTSAQFKLHEEDILYLKLALDAEKYHLDFLVSNGGQALTNQFYVPANL HHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCEEEEEEEEECCCHHHHCCEECCHHH LRDPALFVQVGADAETAFVGAYLAATRRFAELGADRLAGTTAQHACSEAQHLALIRDIGG HCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCC FAPNNLPLPLPIYYNVSDAVPTLAPFLQGGQGFIGPVTAPTAAQIAAVLGGVKSDPTQPY CCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCH TRVF HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA