| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yajQ [C]
Identifier: 222525263
GI number: 222525263
Start: 2539440
End: 2539937
Strand: Direct
Name: yajQ [C]
Synonym: Chy400_2003
Alternate gene names: 222525263
Gene position: 2539440-2539937 (Clockwise)
Preceding gene: 222525262
Following gene: 222525264
Centisome position: 48.2
GC content: 51.81
Gene sequence:
>498_bases ATGCCCGCCGAAAATAGCTTTGATATTGTGTCAGATTTCGATCAACAAGAACTGGTGAACGCGGTTGACCAAACCCTGCG TGAAGTTCAAACACGATACGATCTGAAAGATGCTGGTGTAACAATCACCCTGACGAAAACAGAGCTGATCATTGAAGCTG ACAGCGAGATGAGCCTGCGGAGTGTGCGTGATGTGCTGGAGACAAAAGCGCTGCGCCGCAAGCTGTCACTTAAAATCTTT GACTACGGCAAACCTACCGATGCCAGTGGTGGGCGGGTACGTCAGGTGGTGACGCTACGCCGTGGCATCGATAGTGAGCT GGCAAAGAAATTGAGCAAGATGATCCGGGATCGCTTTCCCAAAGTGCAGCCCCGCATTCAGGGTGATTCACTGCGCGTCG CCGGGAAGAGCCGTGATGAATTACAGGCGGTAATCGCATTTCTCCGCGAACGCGAAGGCGAGATTCCAGTACCTTTGCAG ATGACCAATTATCGCTAA
Upstream 100 bases:
>100_bases GGTTAATGGGCTGCAACAGGGACCACTCGGCACCGTGCCCGGCCAGCCGGTCAACTGGTCATGGCCACCAAATTAGTACA TTCTGATAGGGAGTAAGTCC
Downstream 100 bases:
>100_bases CCATATTCCCTGGCGGTGCCCGGTGTGATCCTCCTGATACCTTCATGCTCAGCGGAGGTTTTGCGCGATCACGGTAAAAA CCCTCTCGCCAATGGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLRSVRDVLETKALRRKLSLKIF DYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFPKVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQ MTNYR
Sequences:
>Translated_165_residues MPAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLRSVRDVLETKALRRKLSLKIF DYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFPKVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQ MTNYR >Mature_164_residues PAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLRSVRDVLETKALRRKLSLKIFD YGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFPKVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQM TNYR
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=167, Percent_Identity=39.5209580838323, Blast_Score=107, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 18808; Mature: 18677
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLR CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCHHHH SVRDVLETKALRRKLSLKIFDYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFP HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC KVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQMTNYR CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC >Mature Secondary Structure PAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLR CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCHHHH SVRDVLETKALRRKLSLKIFDYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFP HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC KVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQMTNYR CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA