Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is yajQ [C]

Identifier: 222525263

GI number: 222525263

Start: 2539440

End: 2539937

Strand: Direct

Name: yajQ [C]

Synonym: Chy400_2003

Alternate gene names: 222525263

Gene position: 2539440-2539937 (Clockwise)

Preceding gene: 222525262

Following gene: 222525264

Centisome position: 48.2

GC content: 51.81

Gene sequence:

>498_bases
ATGCCCGCCGAAAATAGCTTTGATATTGTGTCAGATTTCGATCAACAAGAACTGGTGAACGCGGTTGACCAAACCCTGCG
TGAAGTTCAAACACGATACGATCTGAAAGATGCTGGTGTAACAATCACCCTGACGAAAACAGAGCTGATCATTGAAGCTG
ACAGCGAGATGAGCCTGCGGAGTGTGCGTGATGTGCTGGAGACAAAAGCGCTGCGCCGCAAGCTGTCACTTAAAATCTTT
GACTACGGCAAACCTACCGATGCCAGTGGTGGGCGGGTACGTCAGGTGGTGACGCTACGCCGTGGCATCGATAGTGAGCT
GGCAAAGAAATTGAGCAAGATGATCCGGGATCGCTTTCCCAAAGTGCAGCCCCGCATTCAGGGTGATTCACTGCGCGTCG
CCGGGAAGAGCCGTGATGAATTACAGGCGGTAATCGCATTTCTCCGCGAACGCGAAGGCGAGATTCCAGTACCTTTGCAG
ATGACCAATTATCGCTAA

Upstream 100 bases:

>100_bases
GGTTAATGGGCTGCAACAGGGACCACTCGGCACCGTGCCCGGCCAGCCGGTCAACTGGTCATGGCCACCAAATTAGTACA
TTCTGATAGGGAGTAAGTCC

Downstream 100 bases:

>100_bases
CCATATTCCCTGGCGGTGCCCGGTGTGATCCTCCTGATACCTTCATGCTCAGCGGAGGTTTTGCGCGATCACGGTAAAAA
CCCTCTCGCCAATGGCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MPAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLRSVRDVLETKALRRKLSLKIF
DYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFPKVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQ
MTNYR

Sequences:

>Translated_165_residues
MPAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLRSVRDVLETKALRRKLSLKIF
DYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFPKVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQ
MTNYR
>Mature_164_residues
PAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLRSVRDVLETKALRRKLSLKIFD
YGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFPKVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQM
TNYR

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family [H]

Homologues:

Organism=Escherichia coli, GI87081737, Length=167, Percent_Identity=39.5209580838323, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007551 [H]

Pfam domain/function: PF04461 DUF520 [H]

EC number: NA

Molecular weight: Translated: 18808; Mature: 18677

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLR
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCHHHH
SVRDVLETKALRRKLSLKIFDYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFP
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
KVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQMTNYR
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC
>Mature Secondary Structure 
PAENSFDIVSDFDQQELVNAVDQTLREVQTRYDLKDAGVTITLTKTELIIEADSEMSLR
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCHHHH
SVRDVLETKALRRKLSLKIFDYGKPTDASGGRVRQVVTLRRGIDSELAKKLSKMIRDRFP
HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
KVQPRIQGDSLRVAGKSRDELQAVIAFLREREGEIPVPLQMTNYR
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA