| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525198
Identifier: 222525198
GI number: 222525198
Start: 2459174
End: 2460103
Strand: Direct
Name: 222525198
Synonym: Chy400_1938
Alternate gene names: NA
Gene position: 2459174-2460103 (Clockwise)
Preceding gene: 222525194
Following gene: 222525203
Centisome position: 46.67
GC content: 57.74
Gene sequence:
>930_bases GTGGTGACAAAGGTAACCAATCAGGTTGTACACACTCCTGATCTGGCGACTCTGGATTTTGGATTGATAGACTCATGGTA CCATGACGATGGTGTAGACGAATCACTATTTGCAACAGTTATGGCAGGTATGATCAATTCTTCAACACTACCTCGCGAAC GCGGTCTTGGGTATGCCCTGGTTGGTGGCCTGGCCATTACGCTGGTTGCCGCCTTGATCGGTGCGCTGTTCGTTTACTGG TTTGTGACCGTGCAACAAGGGCCGGCTCCTGCTGATCTGTTACCGGCGGATGTGCAATTGTACGCCAGCCTGTCGCCGAC CCTGAGCGATGTGCCTGAACAGCCGCGCATCGAGCGGGCATTGAATGAGGTTTTTGGCCTGACGATGCCGTCAGACGCCG CAGCGAATGTGGCGGCACTACTGGGGGTTGATCTGGATAGCGATGTTGTGACCTGGATCGGCAGCGATATTGCGGTGGTC GTGCGTGATTTCACGCCGGTGACCCGTGATGTAGCCGCTGACCTGGTGACGAATGGTGAGGTGCTGGTGTTTCTCGCTTC GCGCAACGATCCGCAGGCGCGTCTGTTTTTGGAGAAGCATCTGACGGTGCGTCGTAATCGTGGTGAGACGATTAACGAGC AGCGGGTAGGCGAGGCTATCATTTACAGTGGTGAGTTGAACAGTCCGCTGCGCGCCGTCGGTCTGATCGAGCACTATGTT GTCTTCTCCAATCGCCAGGAGGCGCTGATCGATCTGGCTGCCGGTCCGGATCGGCCCAACCGCCTGGCCGACCTGCCGGC ATTCCAGCAGTTTCGCGAGACGATAGCCGCAGTGCGTTCGGGGGCAATCTATACCGATGGCTCGCCTGAATCGGAAGCGG CCCGCGCCGCAGTGCGGGCCTGGCTGGTGCAGATGTTAGGGCCTCAATAG
Upstream 100 bases:
>100_bases TGTACGAACGATGTGGGTGGCAGCCAGTTCCTATAGACGCGCTACTTCACGCACGTTTCTGAGGTAGCAACCCGGTTTGT GTCCATCCTCTGTGTCCTCT
Downstream 100 bases:
>100_bases GCTGCGTCGGTGTCGATCACCTACCGCTGCCCGATCACAGTCAGTAGGGCTGATTGATCGATGACGGTGGCCTGGGCGGC GGTACGGTGTCGGATTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MVTKVTNQVVHTPDLATLDFGLIDSWYHDDGVDESLFATVMAGMINSSTLPRERGLGYALVGGLAITLVAALIGALFVYW FVTVQQGPAPADLLPADVQLYASLSPTLSDVPEQPRIERALNEVFGLTMPSDAAANVAALLGVDLDSDVVTWIGSDIAVV VRDFTPVTRDVAADLVTNGEVLVFLASRNDPQARLFLEKHLTVRRNRGETINEQRVGEAIIYSGELNSPLRAVGLIEHYV VFSNRQEALIDLAAGPDRPNRLADLPAFQQFRETIAAVRSGAIYTDGSPESEAARAAVRAWLVQMLGPQ
Sequences:
>Translated_309_residues MVTKVTNQVVHTPDLATLDFGLIDSWYHDDGVDESLFATVMAGMINSSTLPRERGLGYALVGGLAITLVAALIGALFVYW FVTVQQGPAPADLLPADVQLYASLSPTLSDVPEQPRIERALNEVFGLTMPSDAAANVAALLGVDLDSDVVTWIGSDIAVV VRDFTPVTRDVAADLVTNGEVLVFLASRNDPQARLFLEKHLTVRRNRGETINEQRVGEAIIYSGELNSPLRAVGLIEHYV VFSNRQEALIDLAAGPDRPNRLADLPAFQQFRETIAAVRSGAIYTDGSPESEAARAAVRAWLVQMLGPQ >Mature_309_residues MVTKVTNQVVHTPDLATLDFGLIDSWYHDDGVDESLFATVMAGMINSSTLPRERGLGYALVGGLAITLVAALIGALFVYW FVTVQQGPAPADLLPADVQLYASLSPTLSDVPEQPRIERALNEVFGLTMPSDAAANVAALLGVDLDSDVVTWIGSDIAVV VRDFTPVTRDVAADLVTNGEVLVFLASRNDPQARLFLEKHLTVRRNRGETINEQRVGEAIIYSGELNSPLRAVGLIEHYV VFSNRQEALIDLAAGPDRPNRLADLPAFQQFRETIAAVRSGAIYTDGSPESEAARAAVRAWLVQMLGPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33378; Mature: 33378
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTKVTNQVVHTPDLATLDFGLIDSWYHDDGVDESLFATVMAGMINSSTLPRERGLGYAL CCCCCCCHHCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHH VGGLAITLVAALIGALFVYWFVTVQQGPAPADLLPADVQLYASLSPTLSDVPEQPRIERA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCHHHCCCCCCHHHHH LNEVFGLTMPSDAAANVAALLGVDLDSDVVTWIGSDIAVVVRDFTPVTRDVAADLVTNGE HHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC VLVFLASRNDPQARLFLEKHLTVRRNRGETINEQRVGEAIIYSGELNSPLRAVGLIEHYV EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHH VFSNRQEALIDLAAGPDRPNRLADLPAFQQFRETIAAVRSGAIYTDGSPESEAARAAVRA HCCCCHHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH WLVQMLGPQ HHHHHHCCC >Mature Secondary Structure MVTKVTNQVVHTPDLATLDFGLIDSWYHDDGVDESLFATVMAGMINSSTLPRERGLGYAL CCCCCCCHHCCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHH VGGLAITLVAALIGALFVYWFVTVQQGPAPADLLPADVQLYASLSPTLSDVPEQPRIERA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEECCCHHHCCCCCCHHHHH LNEVFGLTMPSDAAANVAALLGVDLDSDVVTWIGSDIAVVVRDFTPVTRDVAADLVTNGE HHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC VLVFLASRNDPQARLFLEKHLTVRRNRGETINEQRVGEAIIYSGELNSPLRAVGLIEHYV EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCEEEECCCCCCHHHHHHHHHHHH VFSNRQEALIDLAAGPDRPNRLADLPAFQQFRETIAAVRSGAIYTDGSPESEAARAAVRA HCCCCHHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH WLVQMLGPQ HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA