| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525185
Identifier: 222525185
GI number: 222525185
Start: 2439619
End: 2442135
Strand: Reverse
Name: 222525185
Synonym: Chy400_1924
Alternate gene names: NA
Gene position: 2442135-2439619 (Counterclockwise)
Preceding gene: 222525186
Following gene: 222525182
Centisome position: 46.35
GC content: 59.32
Gene sequence:
>2517_bases ATGACCATGATTGAAACGCAGCTTCGCTCGCTACTGGTGACCACGAAGCCAATCCGCGACCTGACGATTGATGCGGTTAT CGCGGCAACAAAGCGCGCCGAACAGCGGATTGCTCCGCTATGGCCATTACGCTACTTCGTGGCAGTCAATCCCTATTTGG GGCTGATCGATCACACCTTTGCCGATGCTGCGCAGTTGCTGGCCCGGCGAACAGATGCCCGTATGACGGCACCCCGCGAC TTTTACGCCCAGGCCATCAAGAGTGGGCGCATCACCGATGCCGATCTTGCTGCGGCAATTGCTGACGAGAAGCTGCCCTC TCCGGCCCCGGCAAGCGTCGCTGCGCTGAAGGAGTTCGCATTCAGCAAAGATCCCGACCCGGCAACGACACCACTGCCTA CTATTGCTGATGTCGCGACCACTGTTACCGGTATCAATTGGGCAGATTTCGTCACCGATGCAATCTCCACCTGGGCCGGC GCATACTTCGATCTGGGTCAATCCTACTGGCGCTCACCGTGGGCGCAGTTGCCGGCTTATGCTGCCTGGCGGGCCGAGGC CGCTCACGACCGCACTGCGCAGGCACGTGGTGTGCATGGCATGCGCCGGGCGCTCCGCGAACTACCTGAAACAGCGCTTG AGACGATTGTCACTGCGGTGAAGATGCTCAACATCCCTGAACAAGGTTTGGAAGCCTATCTGCACCGACTGTTACTGACG ATTCACGGTTGGGCCAGCTATGCCCGCTACCTGCGCTGGGATGCAGAACTCTACGGCGGTGAGGATCACACGCTGACCGA CCTGCTGGCAATCCGTCTGGTGTGGGAAGTTGCACTCTGGCATAGTTTTGCCGACCGGGGTGTCGCCGAGGCGTGGCACA AATGCAAGCCTGAACTGAGTAACGAACAACTGACGGAAACAGCCCGGTATGCGCTGGCCGGCAACATACTGCTCCAGCGT GCCTTCGAGAAGTCGTATCAACGCCAATTGTTTGCCCGTCTCGGCACTGCCAGACCGGCAACGACCCCACAGCGCAAGCG AGTGCAGGCGGCATTCTGCATCGATGTACGTTCTGAAATTTTTCGACGTGCGCTTGAAACCACCACCGATGACATTGAAA CCATCGGTTTCGCCGGTTTCTTCGGCTTTCCCATCGAGTATGTGCCACTGGCTGAAGTCCACGGCGGTGCCCAGTGTCCG GTATTGTTGACACCTCAGTTTGTGATCGCGGAAGCAGTGGATGGTGCATCGACAGACGAAGTGGCAAAGATCATAGAGCG ACGCGCTCTAAGGCAACGGGTTGCCAAGGCATGGCGCATGTTCAAGTTCGCCCCGATCTCCTGTTTCGGCTTCGTTGGCC CGGTGGGACTGGCGTATCTGCGCAAGCTGGTGCTGGATACGCTCGGCATCACCCGTCCGGTGCCACACCCGGCCCAGTTT GGTCTCGATGCCCGCACACGCGAGCACGTGGCCCCCATTCTTGAACCGGGCTTGATCGGCGACCGACCTACCGGCATGAC GCTGGAACAGCGGGTCGCTGCCGCCGCCGGTGCGCTCAAGGCAATGTCGCTGACCGACAACTTCGCCCGCATTGTCTTAC TGGCCGGCCATGGCTCAACAACGGTCAACAACCCGCACGCCACCGGCCTCGATTGTGGTGCCTGTGGTGGTCATACCGGT GAAGCGAATGTGCGGGTCGCTGTGCGTATTCTGAACGATCCGGCAGTACGGACCAAACTCAAGGAGCAGGGGATCGTCAT TCCAGACGACACCGTGTTTGTGGCCGCCCTGCACGACACTACCACCGACGACATCACCATCTTCGATAAGCACATGATCC CGGCCAGCCATGCCGACGATCTCAAGCGGTTAGAGGCCGACCTGGCTGCCGCCGGTCGCCTGGCACGTGCCGAGCGTGCA GCCCTGCTCAAGATTGATCGCAAGGCCGACATTGATCGGCAAGTGCGTCAGCGCAGCAAAGACTGGTCGCAGGTACGACC CGAATGGGGATTGGCCGGCTGTGCAGCATTTATTGCCGCACCACGGGATCGCACTGCCGGGATCAAACTCGATGGCCGTT CCTTCCTTCACTCGTACACCTGGCAGCAAGACAGCGACTTCAGCGTCCTGGAGCTGATCATGACGGCACCGATGATTGTG GCCAGTTGGATCAACCTCCAGTACTACGGCTCGACCGTCGATAACCGGTTGTTCGGCAGTGGCAACAAAACGTTACACAA CGTTGTCGGCACACTCGGCGTACTTGAGGGCAATGCCGGTGACTTACGGGTTGGATTACCCTGGCAGTCAGTGCACGACG GAGAAAATTATGTCCACGAACCGATGCGGCTCCACGTGCTGATTGAAGCCCCCATCCCGGCGATGACAGCCATCATCGCC AAACACGAGCAGGTGCGGCAACTGCTCGATAACGGCTGGCTCTACCTGTTTGCCCTTGATGATCGGGGAGTCGTCACCCA CAAGTACGCCGGCAATCTTCAGTGGGAACCGGTATAG
Upstream 100 bases:
>100_bases TTTCTACGCTAACACGCTGTTTGACCGCTTCATCGATACGTTTCGCCTGGCCCGTTAATCGTTGAATGGGGATTACTCGC TTGCAATGGAGGTAATACCA
Downstream 100 bases:
>100_bases TGCTCTATCCGGCGCACGGTATGCAGCGAGCAATACTACCTCGTAGCCGAAACTGTGCGTCATCACACCAGAACATACCG CCTGCCTGACTCCACAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 838; Mature: 837
Protein sequence:
>838_residues MTMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTFADAAQLLARRTDARMTAPRD FYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFAFSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAG AYFDLGQSYWRSPWAQLPAYAAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELSNEQLTETARYALAGNILLQR AFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEIFRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCP VLLTPQFVIAEAVDGASTDEVAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGSTTVNNPHATGLDCGACGGHTG EANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDTTTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERA ALLKIDRKADIDRQVRQRSKDWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHEPMRLHVLIEAPIPAMTAIIA KHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV
Sequences:
>Translated_838_residues MTMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTFADAAQLLARRTDARMTAPRD FYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFAFSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAG AYFDLGQSYWRSPWAQLPAYAAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELSNEQLTETARYALAGNILLQR AFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEIFRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCP VLLTPQFVIAEAVDGASTDEVAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGSTTVNNPHATGLDCGACGGHTG EANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDTTTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERA ALLKIDRKADIDRQVRQRSKDWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHEPMRLHVLIEAPIPAMTAIIA KHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV >Mature_837_residues TMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTFADAAQLLARRTDARMTAPRDF YAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFAFSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAGA YFDLGQSYWRSPWAQLPAYAAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLTI HGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELSNEQLTETARYALAGNILLQRA FEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEIFRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCPV LLTPQFVIAEAVDGASTDEVAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQFG LDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGSTTVNNPHATGLDCGACGGHTGE ANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDTTTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERAA LLKIDRKADIDRQVRQRSKDWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIVA SWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHEPMRLHVLIEAPIPAMTAIIAK HEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1777_CHLAA (A9WCK3)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001635383.1 - GeneID: 5826227 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_1777 - HOGENOM: HBG520117 - OMA: FAEDWSE - ProtClustDB: CLSK2400063 - HAMAP: MF_01871 - InterPro: IPR018752
Pfam domain/function: PF10070 DUF2309
EC number: NA
Molecular weight: Translated: 92483; Mature: 92352
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTF CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCHHHHHHHHH ADAAQLLARRTDARMTAPRDFYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFA HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH FSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAGAYFDLGQSYWRSPWAQLPAY CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH AAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC NEQLTETARYALAGNILLQRAFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH FRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCPVLLTPQFVIAEAVDGASTDE HHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCEEECCHHHHHHHCCCCCHHH VAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGST CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC TVNNPHATGLDCGACGGHTGEANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDT CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCEECCCCCEEEEEECCC TTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERAALLKIDRKADIDRQVRQRSK CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCC DWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV CHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHH ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHE HHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHEECCCCCEEECCCCHHCCCCHHHHCC PMRLHVLIEAPIPAMTAIIAKHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV CEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEECCCC >Mature Secondary Structure TMIETQLRSLLVTTKPIRDLTIDAVIAATKRAEQRIAPLWPLRYFVAVNPYLGLIDHTF CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCHHHHHHHHH ADAAQLLARRTDARMTAPRDFYAQAIKSGRITDADLAAAIADEKLPSPAPASVAALKEFA HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH FSKDPDPATTPLPTIADVATTVTGINWADFVTDAISTWAGAYFDLGQSYWRSPWAQLPAY CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCH AAWRAEAAHDRTAQARGVHGMRRALRELPETALETIVTAVKMLNIPEQGLEAYLHRLLLT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IHGWASYARYLRWDAELYGGEDHTLTDLLAIRLVWEVALWHSFADRGVAEAWHKCKPELS HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC NEQLTETARYALAGNILLQRAFEKSYQRQLFARLGTARPATTPQRKRVQAAFCIDVRSEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH FRRALETTTDDIETIGFAGFFGFPIEYVPLAEVHGGAQCPVLLTPQFVIAEAVDGASTDE HHHHHHCCCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCEEECCHHHHHHHCCCCCHHH VAKIIERRALRQRVAKAWRMFKFAPISCFGFVGPVGLAYLRKLVLDTLGITRPVPHPAQF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC GLDARTREHVAPILEPGLIGDRPTGMTLEQRVAAAAGALKAMSLTDNFARIVLLAGHGST CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC TVNNPHATGLDCGACGGHTGEANVRVAVRILNDPAVRTKLKEQGIVIPDDTVFVAALHDT CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCEECCCCCEEEEEECCC TTDDITIFDKHMIPASHADDLKRLEADLAAAGRLARAERAALLKIDRKADIDRQVRQRSK CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCC DWSQVRPEWGLAGCAAFIAAPRDRTAGIKLDGRSFLHSYTWQQDSDFSVLELIMTAPMIV CHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHH ASWINLQYYGSTVDNRLFGSGNKTLHNVVGTLGVLEGNAGDLRVGLPWQSVHDGENYVHE HHHHHHEEECCCCCCCEECCCCHHHHHHHHHHHHEECCCCCEEECCCCHHCCCCHHHHCC PMRLHVLIEAPIPAMTAIIAKHEQVRQLLDNGWLYLFALDDRGVVTHKYAGNLQWEPV CEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA