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The map label for this gene is dmpD [H]

Identifier: 222525155

GI number: 222525155

Start: 2393950

End: 2394783

Strand: Reverse

Name: dmpD [H]

Synonym: Chy400_1893

Alternate gene names: 222525155

Gene position: 2394783-2393950 (Counterclockwise)

Preceding gene: 222525160

Following gene: 222525154

Centisome position: 45.45

GC content: 60.91

Gene sequence:

>834_bases
ATGACCACACATACTGCATCTGCTGCTGAAACTGCCGTTGCCGGCCTGCGCACGTCGTTTCGTCGTGCCGGGCAGGGTTA
TCCGCTCCTCTTGCTGCACGGTTGGGGTGGCTCGTCGCGGTTGTGGCACTATACGCTGCGCGATCTGGCGGATCGGTACA
TGCTGATCGCCCCTGATCTGCCCGGCTTTGGGGCATCACCTCCGCTCAGCGGTCGGTTGTCGCTCGAACGGCTTGCCGAT
TGGGTGATTGCGTTTGCCGATGCCCTTGGTCTGGAACGGTTTGCCATCAACGGCCATTCGCTGTGTGCTGCTGTCGCCGT
TCACGTTGCTGCGCGCTACCCCGAACGGGTTTCCCATCTGATTGTTACCAGCTTCAGCACCTTTCGCGATGAACGTGAAC
GACGGGTTGTGGCGTCGATCCACCATCTGATGGCCCTCTGGTTAGCATTACGCCGCCCATGGATGCTCGATGTCCAGCCC
CTGATGCGTCTGGTGGGTAGTCGCTTCTTCTACCGGTTACCTGCTGATCACGCCCTGCTGCGCGAGACCTTTGCCGATTT
TCTGGCGATGGAACAACGCACAGCGCTGGAGACCGCACGGGGAGCAGGAAGTCCGACGATCAGCGCTGCCCTGGCCGCGG
TGCGCGCTCCGGCACTACTGATCGCCTGCCGTCACGACCAGATTATGCCACCGCCGGGTGCACCGGTTGCTGCTGCGCGC
ATCCCCCGCTGCCGGCTGGTTTGGATTGAGCAGTGTGGTCATTTGCCAATGCTGGAACGACCGCACGAATACCACGCTAT
TCTGACCGAATTTCTGAAGGATGGGGCTGTATGA

Upstream 100 bases:

>100_bases
CGCCAAACCTGCGACACGTGTATTTTTGAGCGTGAAACGATGACCATGCGATGTGGTATCATAGTTTATGTAGACACTTC
TTGCGAGGGATTATTTCCCT

Downstream 100 bases:

>100_bases
CTGTCGATTTGGCCGCTTATCGCGCTGGATTTCCGATTACCGAACGCTACGCCTTTCTTAGCCACGCGGCTGTCTCACCG
TTGCATCAGCATGTGCAGGC

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTTHTASAAETAVAGLRTSFRRAGQGYPLLLLHGWGGSSRLWHYTLRDLADRYMLIAPDLPGFGASPPLSGRLSLERLAD
WVIAFADALGLERFAINGHSLCAAVAVHVAARYPERVSHLIVTSFSTFRDERERRVVASIHHLMALWLALRRPWMLDVQP
LMRLVGSRFFYRLPADHALLRETFADFLAMEQRTALETARGAGSPTISAALAAVRAPALLIACRHDQIMPPPGAPVAAAR
IPRCRLVWIEQCGHLPMLERPHEYHAILTEFLKDGAV

Sequences:

>Translated_277_residues
MTTHTASAAETAVAGLRTSFRRAGQGYPLLLLHGWGGSSRLWHYTLRDLADRYMLIAPDLPGFGASPPLSGRLSLERLAD
WVIAFADALGLERFAINGHSLCAAVAVHVAARYPERVSHLIVTSFSTFRDERERRVVASIHHLMALWLALRRPWMLDVQP
LMRLVGSRFFYRLPADHALLRETFADFLAMEQRTALETARGAGSPTISAALAAVRAPALLIACRHDQIMPPPGAPVAAAR
IPRCRLVWIEQCGHLPMLERPHEYHAILTEFLKDGAV
>Mature_276_residues
TTHTASAAETAVAGLRTSFRRAGQGYPLLLLHGWGGSSRLWHYTLRDLADRYMLIAPDLPGFGASPPLSGRLSLERLADW
VIAFADALGLERFAINGHSLCAAVAVHVAARYPERVSHLIVTSFSTFRDERERRVVASIHHLMALWLALRRPWMLDVQPL
MRLVGSRFFYRLPADHALLRETFADFLAMEQRTALETARGAGSPTISAALAAVRAPALLIACRHDQIMPPPGAPVAAARI
PRCRLVWIEQCGHLPMLERPHEYHAILTEFLKDGAV

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324392, Length=143, Percent_Identity=27.972027972028, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30691; Mature: 30560

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHTASAAETAVAGLRTSFRRAGQGYPLLLLHGWGGSSRLWHYTLRDLADRYMLIAPDL
CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCC
PGFGASPPLSGRLSLERLADWVIAFADALGLERFAINGHSLCAAVAVHVAARYPERVSHL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHCHHHHHHH
IVTSFSTFRDERERRVVASIHHLMALWLALRRPWMLDVQPLMRLVGSRFFYRLPADHALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCHHHHH
RETFADFLAMEQRTALETARGAGSPTISAALAAVRAPALLIACRHDQIMPPPGAPVAAAR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCHHHHC
IPRCRLVWIEQCGHLPMLERPHEYHAILTEFLKDGAV
CCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTHTASAAETAVAGLRTSFRRAGQGYPLLLLHGWGGSSRLWHYTLRDLADRYMLIAPDL
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEECCC
PGFGASPPLSGRLSLERLADWVIAFADALGLERFAINGHSLCAAVAVHVAARYPERVSHL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHCHHHHHHH
IVTSFSTFRDERERRVVASIHHLMALWLALRRPWMLDVQPLMRLVGSRFFYRLPADHALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEECCCHHHHH
RETFADFLAMEQRTALETARGAGSPTISAALAAVRAPALLIACRHDQIMPPPGAPVAAAR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCHHHHC
IPRCRLVWIEQCGHLPMLERPHEYHAILTEFLKDGAV
CCCCEEHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194577 [H]