| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is fur [H]
Identifier: 222525119
GI number: 222525119
Start: 2348194
End: 2348664
Strand: Direct
Name: fur [H]
Synonym: Chy400_1857
Alternate gene names: 222525119
Gene position: 2348194-2348664 (Clockwise)
Preceding gene: 222525118
Following gene: 222525124
Centisome position: 44.57
GC content: 55.63
Gene sequence:
>471_bases ATGACCACAAATGCTTCCTCATCACCCCAACCGTCGCTTGATACACAGGCCTGGCTCAATAGTGTTCGGGCAGCATGGCA GCGTACCGGTTTGCGCATTACGCTTCCTCGCATGCGGGTGATTGAAACGATTGCGTCATACCGTGCTCCTTTCAGTGCCG AACAGCTTTACGCCGATCTGTGTACGCACAGTGAAACTCCTGGCCGGGCAACTGTTTATCGCACCATTGAACAACTTCAC GCCAGTGGCTGGTTGGCCCGTATTCATGGGCCGGTCGGCGAAGAGGGGTATGTACCTTGCCATCCTGGTCATCTTCACCA CCTGGTCTGTACCAGGTGCGGTGCGGTCACCAGCTTTGAAGGGTGCGATCTCGATAATTTGCTGAATCGGGTTGCGGCTG AAACTGGCTTTAGCGTGGAGGGGCATCTCTTGCAGCTCTTTGGCCGTTGTGCGCGCTGTCAGGCCAATTGA
Upstream 100 bases:
>100_bases TTGGGGCGGCCCTTGTGGCCGCCCTATGTCCATCGTATACGCGCTAACAACAGTGGTGCGACGCACTTGCTGAGAGCGTT GCACCTGGATGCAAAGCACT
Downstream 100 bases:
>100_bases TACAAGCTTATCGAAGTAACTGTGTAGAGGAAGAAACGGCGAAGGTAGTGCTTTTGCCGTTTCTTTGTTTGGGGGTTGAA CAGGAACTAAGGACACCCTC
Product: Fur family ferric uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTTNASSSPQPSLDTQAWLNSVRAAWQRTGLRITLPRMRVIETIASYRAPFSAEQLYADLCTHSETPGRATVYRTIEQLH ASGWLARIHGPVGEEGYVPCHPGHLHHLVCTRCGAVTSFEGCDLDNLLNRVAAETGFSVEGHLLQLFGRCARCQAN
Sequences:
>Translated_156_residues MTTNASSSPQPSLDTQAWLNSVRAAWQRTGLRITLPRMRVIETIASYRAPFSAEQLYADLCTHSETPGRATVYRTIEQLH ASGWLARIHGPVGEEGYVPCHPGHLHHLVCTRCGAVTSFEGCDLDNLLNRVAAETGFSVEGHLLQLFGRCARCQAN >Mature_155_residues TTNASSSPQPSLDTQAWLNSVRAAWQRTGLRITLPRMRVIETIASYRAPFSAEQLYADLCTHSETPGRATVYRTIEQLHA SGWLARIHGPVGEEGYVPCHPGHLHHLVCTRCGAVTSFEGCDLDNLLNRVAAETGFSVEGHLLQLFGRCARCQAN
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of the fbp protein [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=128, Percent_Identity=32.8125, Blast_Score=77, Evalue=4e-16,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17160; Mature: 17028
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNASSSPQPSLDTQAWLNSVRAAWQRTGLRITLPRMRVIETIASYRAPFSAEQLYADL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHH CTHSETPGRATVYRTIEQLHASGWLARIHGPVGEEGYVPCHPGHLHHLVCTRCGAVTSFE HHCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC GCDLDNLLNRVAAETGFSVEGHLLQLFGRCARCQAN CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTNASSSPQPSLDTQAWLNSVRAAWQRTGLRITLPRMRVIETIASYRAPFSAEQLYADL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHH CTHSETPGRATVYRTIEQLHASGWLARIHGPVGEEGYVPCHPGHLHHLVCTRCGAVTSFE HHCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC GCDLDNLLNRVAAETGFSVEGHLLQLFGRCARCQAN CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8406856 [H]