| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is frzE [H]
Identifier: 222525071
GI number: 222525071
Start: 2285571
End: 2287790
Strand: Direct
Name: frzE [H]
Synonym: Chy400_1808
Alternate gene names: 222525071
Gene position: 2285571-2287790 (Clockwise)
Preceding gene: 222525070
Following gene: 222525072
Centisome position: 43.38
GC content: 55.9
Gene sequence:
>2220_bases ATGGATTTGACCAGCTTCTACGATCAGTTTCGTGATGAGACAGCCGAAAATGTACGGGTGTTGAACGATGCCCTCTTGAA CCTGGAGGCGCAGGTTGATGATGGTCAGCGGCGGGCAGCCCTGGATCGGGCTTTTCGCGCAGTCCATACGATTAAGGGGT CGGCGCGCATGCTGGGTTTTGATCCGATTGCTCAGTTGGCGCATGCACTGGAACATGTCTTAGGTGATCTGCGAGAAGGT CGGTGTATACCTGAACGAACACTGATCGATCTGCTGCTGCAAGGTGGCGATCTGGTTACCCGGCTGACCGCTGAGATTCC TCAGTTGTCGGCAGCAACTCTCGCCCATCTGCCAGATTTTTTGCAAGCGCTAAGGGCAATCTCTCCGGCAATCCCTTCCG TTTCGCCACCCACTCCACAACCTGCTTCGCCAGAGCCGTCGTCGCCAATCGACACACCACTGCGTACCACACGCCAGACA GTGCGAGTGCGTGTTGATCGCCTCGACCGACTGTTTAATCTGGCCGGTGAACTTACCATCGAGCAACAATCGCTTGCCGA ACTCGGTACGGAATTAGAACAGTTATACGCACTGGTCTCGCGCCAGCAACGTGCACTGCTGGCCCTTGAACAAGAGCTGG CCCGTCTCCGTTTCTCGTCAACTCAGCGCCAGGCGCTTGATGCGCGTCTGTCCACCTTGCGTGATGTGCAAGTGATGCTC GTTGATCGTGTCCAGAACCAGCGCGAGAACCTTGATCGTTACCTGTCGCGTCAGCATCTACTGGTCAAAGATCTGGAGCA AGAGGTCATGGCGGTGCGCCTGTTACCGATTGCTACCATCTTTAACTCACTCCCCCGTCTGGTGCGTGATCTGGCAACGG CGACCGGTAAACAGGCAGTGTTGGAGATCCGTGGTGAAACGACCGAGCTTGATCGTAAAGTGCTGGAGTTGATTAGCGAT CCGCTGGTTCATCTGATACGGAATGCAGTTGATCACGGTCTCGAACCACCGGATGAACGCATTGCGCAGGGCAAACCACC AACAGGTTTGATTCAGGTCAGTGCCGAGTCCTCGGGCAATGAGGTGCGGATCAGCATTCAGGATGATGGTCGGGGAATTG ATCCAGCTCGCATCCGCACCCGGGCGATAGAACTCGGTCTGTTAACTGCCGGTCGAGCCGATCAGCTCGATACGCAAGAG ACGCTCGATCTCATTTTCCAACCCGGCTTCTCGACGGCAACGAACGTTACCGAAATTTCCGGGCGTGGAGTCGGTATGGA CATCGTGCGCGCCAATCTGCTTGAATTGGGCGGGCAGGTGCGCATCGATTCGACCATCGGCCAGGGTACGACCATCACGC TCACGATCCCGCTCACTTTAATCACCAGCCGGGTTGTGGTTGTGCAGGTCGGCCAACACCATCTGGCGCTGCCGGCAGTG ACTGTTCGGAGTATCTTGTGGGTACAGCGCGATCAGATTCAGTTCATTGATGGTCAGCCGACATTCGCGCATCAGCAACG CACGATCAGTCTGCTCGCTTTGGCCGAACTACTGGCTATTCCCGCGGAGTCGCCACTCACGCGCTACCGTCGTGTACCGG CTGTATTACTCAAGACGCGACAACATCGCGTTGCCTTGTTGGTTGACGACGTGATCGATGAGCGCGAGGCTGTGATTAAG CCACTCGGCCCTCTGTTTGCTCGCCGCCCGGCCTTGAGTGGCGCGGTCCAATCGGGAGATGGTCGTCTCGTGTTGTTAAT CAATCCGCTCTACCTGGTCGAAAGGAATGGCTATCGGCCAAAGCCTGCTGCTACCGCAATCAAGCCGGTAGCGGAACCAA CCCGAACGGCACGCCTGCTGGTTGTTGATGACTCGTTTACAACACGCGAATTATTGCGCAGCATTCTCCAATCGGCTGGT TACGATGTTACGGTGGCTATTGATGGGGCAGATGCTCTTGACAGGCTCCGTTCGACGCCATACGATCTGGTAGTAAGCGA TATCGAGATGCCTCGTGTCGATGGCTTTACCCTCACGACTCGCATCCGAAATGAACTGGCCCTCGTTGATCTGCCGGTCA TTTTAATTACCAGCCTTGCTTCCGAAGAACATCGTCGTCGCGGGTTGGAAGTGGGAGCACAGGCCTACATCGTGAAGAGT CAGTTTAACCAGGACAGTTTGCTGAACGTGATTCAGCAACTGCTCGGCCACGAGGAGTAG
Upstream 100 bases:
>100_bases TGGATGGGAGAGACATTTGCGGAGCGACCTACGCTGTCATTGAACAGGCCAGTATTGCCCAGACTCTCAGTGAGCGCCGT GTTGAGAACAGTTGTACCGT
Downstream 100 bases:
>100_bases CTATGCCAACCATTCTGGTCGTTGATGATAGCCGTCTCGTTACCGACATCGTCAAGATGCGACTCGAGATGTATGGCTAT ACTGTTCGTCTCGCCCATAG
Product: CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MDLTSFYDQFRDETAENVRVLNDALLNLEAQVDDGQRRAALDRAFRAVHTIKGSARMLGFDPIAQLAHALEHVLGDLREG RCIPERTLIDLLLQGGDLVTRLTAEIPQLSAATLAHLPDFLQALRAISPAIPSVSPPTPQPASPEPSSPIDTPLRTTRQT VRVRVDRLDRLFNLAGELTIEQQSLAELGTELEQLYALVSRQQRALLALEQELARLRFSSTQRQALDARLSTLRDVQVML VDRVQNQRENLDRYLSRQHLLVKDLEQEVMAVRLLPIATIFNSLPRLVRDLATATGKQAVLEIRGETTELDRKVLELISD PLVHLIRNAVDHGLEPPDERIAQGKPPTGLIQVSAESSGNEVRISIQDDGRGIDPARIRTRAIELGLLTAGRADQLDTQE TLDLIFQPGFSTATNVTEISGRGVGMDIVRANLLELGGQVRIDSTIGQGTTITLTIPLTLITSRVVVVQVGQHHLALPAV TVRSILWVQRDQIQFIDGQPTFAHQQRTISLLALAELLAIPAESPLTRYRRVPAVLLKTRQHRVALLVDDVIDEREAVIK PLGPLFARRPALSGAVQSGDGRLVLLINPLYLVERNGYRPKPAATAIKPVAEPTRTARLLVVDDSFTTRELLRSILQSAG YDVTVAIDGADALDRLRSTPYDLVVSDIEMPRVDGFTLTTRIRNELALVDLPVILITSLASEEHRRRGLEVGAQAYIVKS QFNQDSLLNVIQQLLGHEE
Sequences:
>Translated_739_residues MDLTSFYDQFRDETAENVRVLNDALLNLEAQVDDGQRRAALDRAFRAVHTIKGSARMLGFDPIAQLAHALEHVLGDLREG RCIPERTLIDLLLQGGDLVTRLTAEIPQLSAATLAHLPDFLQALRAISPAIPSVSPPTPQPASPEPSSPIDTPLRTTRQT VRVRVDRLDRLFNLAGELTIEQQSLAELGTELEQLYALVSRQQRALLALEQELARLRFSSTQRQALDARLSTLRDVQVML VDRVQNQRENLDRYLSRQHLLVKDLEQEVMAVRLLPIATIFNSLPRLVRDLATATGKQAVLEIRGETTELDRKVLELISD PLVHLIRNAVDHGLEPPDERIAQGKPPTGLIQVSAESSGNEVRISIQDDGRGIDPARIRTRAIELGLLTAGRADQLDTQE TLDLIFQPGFSTATNVTEISGRGVGMDIVRANLLELGGQVRIDSTIGQGTTITLTIPLTLITSRVVVVQVGQHHLALPAV TVRSILWVQRDQIQFIDGQPTFAHQQRTISLLALAELLAIPAESPLTRYRRVPAVLLKTRQHRVALLVDDVIDEREAVIK PLGPLFARRPALSGAVQSGDGRLVLLINPLYLVERNGYRPKPAATAIKPVAEPTRTARLLVVDDSFTTRELLRSILQSAG YDVTVAIDGADALDRLRSTPYDLVVSDIEMPRVDGFTLTTRIRNELALVDLPVILITSLASEEHRRRGLEVGAQAYIVKS QFNQDSLLNVIQQLLGHEE >Mature_739_residues MDLTSFYDQFRDETAENVRVLNDALLNLEAQVDDGQRRAALDRAFRAVHTIKGSARMLGFDPIAQLAHALEHVLGDLREG RCIPERTLIDLLLQGGDLVTRLTAEIPQLSAATLAHLPDFLQALRAISPAIPSVSPPTPQPASPEPSSPIDTPLRTTRQT VRVRVDRLDRLFNLAGELTIEQQSLAELGTELEQLYALVSRQQRALLALEQELARLRFSSTQRQALDARLSTLRDVQVML VDRVQNQRENLDRYLSRQHLLVKDLEQEVMAVRLLPIATIFNSLPRLVRDLATATGKQAVLEIRGETTELDRKVLELISD PLVHLIRNAVDHGLEPPDERIAQGKPPTGLIQVSAESSGNEVRISIQDDGRGIDPARIRTRAIELGLLTAGRADQLDTQE TLDLIFQPGFSTATNVTEISGRGVGMDIVRANLLELGGQVRIDSTIGQGTTITLTIPLTLITSRVVVVQVGQHHLALPAV TVRSILWVQRDQIQFIDGQPTFAHQQRTISLLALAELLAIPAESPLTRYRRVPAVLLKTRQHRVALLVDDVIDEREAVIK PLGPLFARRPALSGAVQSGDGRLVLLINPLYLVERNGYRPKPAATAIKPVAEPTRTARLLVVDDSFTTRELLRSILQSAG YDVTVAIDGADALDRLRSTPYDLVVSDIEMPRVDGFTLTTRIRNELALVDLPVILITSLASEEHRRRGLEVGAQAYIVKS QFNQDSLLNVIQQLLGHEE
Specific function: FrzE is involved in a sensory transduction pathway that controls the frequency at which cells reverse their gliding direction. FrzE seems to be capable of autophosphorylating itself on an histidine residue and then to transfer that group to an aspartate r
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=327, Percent_Identity=37.0030581039755, Blast_Score=213, Evalue=4e-56, Organism=Escherichia coli, GI145693157, Length=401, Percent_Identity=25.4364089775561, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1788191, Length=123, Percent_Identity=39.0243902439024, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788713, Length=116, Percent_Identity=36.2068965517241, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1786784, Length=102, Percent_Identity=37.2549019607843, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1788394, Length=104, Percent_Identity=37.5, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1790863, Length=109, Percent_Identity=34.8623853211009, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=32.2033898305085, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1790437, Length=120, Percent_Identity=32.5, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR005467 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF02518 HATPase_c; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 81710; Mature: 81710
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTSFYDQFRDETAENVRVLNDALLNLEAQVDDGQRRAALDRAFRAVHTIKGSARMLGF CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECC DPIAQLAHALEHVLGDLREGRCIPERTLIDLLLQGGDLVTRLTAEIPQLSAATLAHLPDF CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH LQALRAISPAIPSVSPPTPQPASPEPSSPIDTPLRTTRQTVRVRVDRLDRLFNLAGELTI HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE EQQSLAELGTELEQLYALVSRQQRALLALEQELARLRFSSTQRQALDARLSTLRDVQVML CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDRVQNQRENLDRYLSRQHLLVKDLEQEVMAVRLLPIATIFNSLPRLVRDLATATGKQAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LEIRGETTELDRKVLELISDPLVHLIRNAVDHGLEPPDERIAQGKPPTGLIQVSAESSGN EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCC EVRISIQDDGRGIDPARIRTRAIELGLLTAGRADQLDTQETLDLIFQPGFSTATNVTEIS EEEEEEECCCCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEC GRGVGMDIVRANLLELGGQVRIDSTIGQGTTITLTIPLTLITSRVVVVQVGQHHLALPAV CCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEHHHHHCCEEEEEECCCHHHHHHH TVRSILWVQRDQIQFIDGQPTFAHQQRTISLLALAELLAIPAESPLTRYRRVPAVLLKTR HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC QHRVALLVDDVIDEREAVIKPLGPLFARRPALSGAVQSGDGRLVLLINPLYLVERNGYRP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCC KPAATAIKPVAEPTRTARLLVVDDSFTTRELLRSILQSAGYDVTVAIDGADALDRLRSTP CCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCC YDLVVSDIEMPRVDGFTLTTRIRNELALVDLPVILITSLASEEHRRRGLEVGAQAYIVKS HHEEEECCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEECC QFNQDSLLNVIQQLLGHEE CCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MDLTSFYDQFRDETAENVRVLNDALLNLEAQVDDGQRRAALDRAFRAVHTIKGSARMLGF CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECC DPIAQLAHALEHVLGDLREGRCIPERTLIDLLLQGGDLVTRLTAEIPQLSAATLAHLPDF CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH LQALRAISPAIPSVSPPTPQPASPEPSSPIDTPLRTTRQTVRVRVDRLDRLFNLAGELTI HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE EQQSLAELGTELEQLYALVSRQQRALLALEQELARLRFSSTQRQALDARLSTLRDVQVML CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDRVQNQRENLDRYLSRQHLLVKDLEQEVMAVRLLPIATIFNSLPRLVRDLATATGKQAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LEIRGETTELDRKVLELISDPLVHLIRNAVDHGLEPPDERIAQGKPPTGLIQVSAESSGN EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEECCCCC EVRISIQDDGRGIDPARIRTRAIELGLLTAGRADQLDTQETLDLIFQPGFSTATNVTEIS EEEEEEECCCCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEC GRGVGMDIVRANLLELGGQVRIDSTIGQGTTITLTIPLTLITSRVVVVQVGQHHLALPAV CCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEHHHHHCCEEEEEECCCHHHHHHH TVRSILWVQRDQIQFIDGQPTFAHQQRTISLLALAELLAIPAESPLTRYRRVPAVLLKTR HHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC QHRVALLVDDVIDEREAVIKPLGPLFARRPALSGAVQSGDGRLVLLINPLYLVERNGYRP CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCC KPAATAIKPVAEPTRTARLLVVDDSFTTRELLRSILQSAGYDVTVAIDGADALDRLRSTP CCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCC YDLVVSDIEMPRVDGFTLTTRIRNELALVDLPVILITSLASEEHRRRGLEVGAQAYIVKS HHEEEECCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEECC QFNQDSLLNVIQQLLGHEE CCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2165608; 2123853 [H]