| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is acoC [H]
Identifier: 222525024
GI number: 222525024
Start: 2220562
End: 2221512
Strand: Direct
Name: acoC [H]
Synonym: Chy400_1759
Alternate gene names: 222525024
Gene position: 2220562-2221512 (Clockwise)
Preceding gene: 222525023
Following gene: 222525025
Centisome position: 42.14
GC content: 56.15
Gene sequence:
>951_bases ATGAGCATCATCGTTATCGACAACCAACGGGTTCACTACGAAGTGTTTGGTCGCGGCAAGCCGGTCGTCTTCCTCCACGG CTGGTTAGGAAGCTGGCGCTACTGGTATACCTCGATGGAGATCGTTGCCCAGCACTTCCGCACCTACTCCTTCGATTTTT GGGGGTTTGGTGAGTCGCGCACGAACGAAATGCCCACGATCCAGGGCTATTCCAACCAGGTTATCCGCTTTCTCGACGCC ATGGGGATTGACCGGGCAGCGCTGGTTGGGCATTCAATGGGTGGCATGGTTGCGTTGAAAACGGCACTCGACCATCCTGG ACGGGTAGTACGAGTCGCTACGGTAGGTGCACCCATTAATGGCAACTCGCTCTCGTGGATGCTAAAACTCGTGGATCGTC CCTTCTTCGCCGAATTTTTCGCCCGCCGGCCCTGGCTGCGTCGATCACTGTTCCGGTTTTTCTTCGGCGACTCTCTCGAT CCCGAAGTTGACGAAGTATTTGAAGATAGCACCAAATCAACTGCCGACACGATTCGGTCGGCGATCCACTCGATGTGGCG AACCGATCTCACCCCTCTGCTGGATCGGTTGCAGGTTCCGGCGCTGGTTGTCCACGGTGCTCGCGATGAGATTGTAAATC CCAACCAGCTTCAGCTCTTCGTCCATGTCCCGATGGCGCAGGTCGTTCGGATGGAACGGAGCCGTCATTTTCCGTTTGTT GATGAAGCGGAGCAGTTTCACAACATTCTGCTCGACTTTCTCAAGCAACCCGATCCGATGGCGCCAACCCGCAAAGCAGC AACGACACCGAAACCCGATCCGGTACCACCACGACCCGAACCACCGACACTGTCGATTAACGGGAATGATCATCTGCCGT CGGGACACGACACCCCCCACCCACAATCACTACCTTCGCCGTCACGTTCGATATTTCCACCGGGAAGCTGA
Upstream 100 bases:
>100_bases CACTACAGTGGCGGTTACGCCGATCTCTTCACGAGCGCGAATCCAGCGTGGCTCAACTGCGCGCCCGTGCGGTCGGCACT TCCTCAACGGCGAGGCCAGC
Downstream 100 bases:
>100_bases TTGGCTCACTGTCTGAGCATTAGCGCGCGGCAGCCGGCGCTGCCGCGCTGCTGTTTGTGCCTCGCGTAGTCCAGACGTTA TATCGAATATGGTGTAAGTC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Acetoin dehydrogenase E2 component; Dihydrolipoamide acetyltransferase component of acetoin cleaving system [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSIIVIDNQRVHYEVFGRGKPVVFLHGWLGSWRYWYTSMEIVAQHFRTYSFDFWGFGESRTNEMPTIQGYSNQVIRFLDA MGIDRAALVGHSMGGMVALKTALDHPGRVVRVATVGAPINGNSLSWMLKLVDRPFFAEFFARRPWLRRSLFRFFFGDSLD PEVDEVFEDSTKSTADTIRSAIHSMWRTDLTPLLDRLQVPALVVHGARDEIVNPNQLQLFVHVPMAQVVRMERSRHFPFV DEAEQFHNILLDFLKQPDPMAPTRKAATTPKPDPVPPRPEPPTLSINGNDHLPSGHDTPHPQSLPSPSRSIFPPGS
Sequences:
>Translated_316_residues MSIIVIDNQRVHYEVFGRGKPVVFLHGWLGSWRYWYTSMEIVAQHFRTYSFDFWGFGESRTNEMPTIQGYSNQVIRFLDA MGIDRAALVGHSMGGMVALKTALDHPGRVVRVATVGAPINGNSLSWMLKLVDRPFFAEFFARRPWLRRSLFRFFFGDSLD PEVDEVFEDSTKSTADTIRSAIHSMWRTDLTPLLDRLQVPALVVHGARDEIVNPNQLQLFVHVPMAQVVRMERSRHFPFV DEAEQFHNILLDFLKQPDPMAPTRKAATTPKPDPVPPRPEPPTLSINGNDHLPSGHDTPHPQSLPSPSRSIFPPGS >Mature_315_residues SIIVIDNQRVHYEVFGRGKPVVFLHGWLGSWRYWYTSMEIVAQHFRTYSFDFWGFGESRTNEMPTIQGYSNQVIRFLDAM GIDRAALVGHSMGGMVALKTALDHPGRVVRVATVGAPINGNSLSWMLKLVDRPFFAEFFARRPWLRRSLFRFFFGDSLDP EVDEVFEDSTKSTADTIRSAIHSMWRTDLTPLLDRLQVPALVVHGARDEIVNPNQLQLFVHVPMAQVVRMERSRHFPFVD EAEQFHNILLDFLKQPDPMAPTRKAATTPKPDPVPPRPEPPTLSINGNDHLPSGHDTPHPQSLPSPSRSIFPPGS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 lipoyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=115, Percent_Identity=34.7826086956522, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003016 - InterPro: IPR000073 - InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF00364 Biotin_lipoyl [H]
EC number: =2.3.1.12 [H]
Molecular weight: Translated: 35893; Mature: 35762
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIVIDNQRVHYEVFGRGKPVVFLHGWLGSWRYWYTSMEIVAQHFRTYSFDFWGFGESR CEEEEECCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCC TNEMPTIQGYSNQVIRFLDAMGIDRAALVGHSMGGMVALKTALDHPGRVVRVATVGAPIN CCCCCEECCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEHHHHCCCCCEEEEEEECCCCC GNSLSWMLKLVDRPFFAEFFARRPWLRRSLFRFFFGDSLDPEVDEVFEDSTKSTADTIRS CCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHH AIHSMWRTDLTPLLDRLQVPALVVHGARDEIVNPNQLQLFVHVPMAQVVRMERSRHFPFV HHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCH DEAEQFHNILLDFLKQPDPMAPTRKAATTPKPDPVPPRPEPPTLSINGNDHLPSGHDTPH HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC PQSLPSPSRSIFPPGS CCCCCCCCCCCCCCCC >Mature Secondary Structure SIIVIDNQRVHYEVFGRGKPVVFLHGWLGSWRYWYTSMEIVAQHFRTYSFDFWGFGESR EEEEECCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCC TNEMPTIQGYSNQVIRFLDAMGIDRAALVGHSMGGMVALKTALDHPGRVVRVATVGAPIN CCCCCEECCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEHHHHCCCCCEEEEEEECCCCC GNSLSWMLKLVDRPFFAEFFARRPWLRRSLFRFFFGDSLDPEVDEVFEDSTKSTADTIRS CCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHH AIHSMWRTDLTPLLDRLQVPALVVHGARDEIVNPNQLQLFVHVPMAQVVRMERSRHFPFV HHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCCH DEAEQFHNILLDFLKQPDPMAPTRKAATTPKPDPVPPRPEPPTLSINGNDHLPSGHDTPH HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC PQSLPSPSRSIFPPGS CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7813883 [H]