| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is maeB [C]
Identifier: 222525016
GI number: 222525016
Start: 2213252
End: 2214670
Strand: Reverse
Name: maeB [C]
Synonym: Chy400_1751
Alternate gene names: 222525016
Gene position: 2214670-2213252 (Counterclockwise)
Preceding gene: 222525026
Following gene: 222525007
Centisome position: 42.03
GC content: 57.43
Gene sequence:
>1419_bases ATGTCCGTTGGGGTGGCTTACACGCTGACGTTGCGCTGCCAGATTGAAAATCGTCCTGGGATGCTGGGGCGGTTGACCAC CTTGATCGGCGAAGTCGGCGGTGACATCGGTGCGATTGACATTGTGCGCGCTGAACGGAACATTCTGGTTCGCGATATTA CGGTGCGCGTACAAGACGAGCAACACGGGGAGCAACTGGTAGCAGCAATTAACACGTTGCAGAACATCAAAGTGCTTCAG GTAAGTGACCGTGTCTTTCTTACCCACCTCGGCGGCAAGCTGGCCACGCAGAGTCGCGTACCTCTGAAGACGCGCGATGA TCTTTCGCTGGCCTACACTCCCGGTGTGGCCCGTGTCTGTCGGGCAATTGCCGATGATCCGGAGAAGGTGTACGCACTGA CCTGGAAAGGCAACAGTGTGGCCGTCGTGAGCGATGGTTCGGCCATTTTGGGGCTGGGCAACCTGGGGCCGGAAGCGGCG ATGCCGGTGATGGAGGGCAAAGCGATTCTGTTTAAAGAATTGGCGAACATCGATGCGGTGCCGATCTGTCTGCGCTCGCA AGACCCTGATGTGATTGTGCAGACGGTTGAGCAGATCGCGCCGAGTTTTGGTGGCATTAACCTCGAAGATATTGCTGCTC CAAATTGTTTCATTGTCGAGGGTCGGCTCGAAGAGAGTCTCGATATGCCGGTGATGCACGATGACCAGCACGGGACAGCG GTGGTGGTGTTGGCCGCGCTGCGCAATGCGGTACGGATTGTCGGCAAGCGACTGGCAGATGTGCGTGTGGTTGTAAATGG GATCGGGGCAGCCGGTACGGCGATCATTCGCACGCTGATCGAAGCCGGGGTTGGCGAAATTACTGCGGTGGATCGGTTTG GGATCCTGGTCGAAGGTGATCATGCCCGTCAGACCCCGATGCAGCGGATTATTGCTTCACAGACGAACCGGGAACGACGG CGCGGTGATTTAGCGGTGGCGTTGCGCGGTGCCGATGTCTTTATTGGGGTCTCGAAGGGCAATATCCTGACGCCCGACCA TATTCGGGTGATGAGTAGTGATCCGATTGTCTTTGCGCTGGCCAATCCGATCCCCGAAGGCGATCCTGATATGTTGCGTC AGTATGCACGTGTGGTTGCAACTGGCCGCAGTGATCAGCCAAATCAGATTAACAATGTGCTCAGCTTTCCCGGTATCTTC CGTGGTGCGCTCGATGTACACGCAAGGCGTATTACCTCGGCCATGCGGCTCGCTGCCGCCGAAGCACTGGCGACGGTGAT TCCACCGGAAGAGATGAATGAAGATTACATCGTGCCTAGTGTGTTTAACCGGCAGGTTGTGCCGGCCATTGCTGCGGCTG TGGCACAGGCGGCGATTGCTGAAGGGGTGGCGCGGCGAACGCATATGCCGGGTGATTAG
Upstream 100 bases:
>100_bases ACAAATCAAGACTTGTGGTACTATACCATGATAAGGCGATGATGCCCGTCGTGGTGACGGGCATTTTTGTGTGCTTATTT CAGAAAACGAGGTGAGGGCT
Downstream 100 bases:
>100_bases CGGGTTGAACGGTGCGACACGCGACCGGTATCGAGCATGGGCGTGCGGCAGCACGGCTGCCGCACGTCAACTTACGCGCC ACGATCATCGTTGGGTGTAG
Product: Malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSVGVAYTLTLRCQIENRPGMLGRLTTLIGEVGGDIGAIDIVRAERNILVRDITVRVQDEQHGEQLVAAINTLQNIKVLQ VSDRVFLTHLGGKLATQSRVPLKTRDDLSLAYTPGVARVCRAIADDPEKVYALTWKGNSVAVVSDGSAILGLGNLGPEAA MPVMEGKAILFKELANIDAVPICLRSQDPDVIVQTVEQIAPSFGGINLEDIAAPNCFIVEGRLEESLDMPVMHDDQHGTA VVVLAALRNAVRIVGKRLADVRVVVNGIGAAGTAIIRTLIEAGVGEITAVDRFGILVEGDHARQTPMQRIIASQTNRERR RGDLAVALRGADVFIGVSKGNILTPDHIRVMSSDPIVFALANPIPEGDPDMLRQYARVVATGRSDQPNQINNVLSFPGIF RGALDVHARRITSAMRLAAAEALATVIPPEEMNEDYIVPSVFNRQVVPAIAAAVAQAAIAEGVARRTHMPGD
Sequences:
>Translated_472_residues MSVGVAYTLTLRCQIENRPGMLGRLTTLIGEVGGDIGAIDIVRAERNILVRDITVRVQDEQHGEQLVAAINTLQNIKVLQ VSDRVFLTHLGGKLATQSRVPLKTRDDLSLAYTPGVARVCRAIADDPEKVYALTWKGNSVAVVSDGSAILGLGNLGPEAA MPVMEGKAILFKELANIDAVPICLRSQDPDVIVQTVEQIAPSFGGINLEDIAAPNCFIVEGRLEESLDMPVMHDDQHGTA VVVLAALRNAVRIVGKRLADVRVVVNGIGAAGTAIIRTLIEAGVGEITAVDRFGILVEGDHARQTPMQRIIASQTNRERR RGDLAVALRGADVFIGVSKGNILTPDHIRVMSSDPIVFALANPIPEGDPDMLRQYARVVATGRSDQPNQINNVLSFPGIF RGALDVHARRITSAMRLAAAEALATVIPPEEMNEDYIVPSVFNRQVVPAIAAAVAQAAIAEGVARRTHMPGD >Mature_471_residues SVGVAYTLTLRCQIENRPGMLGRLTTLIGEVGGDIGAIDIVRAERNILVRDITVRVQDEQHGEQLVAAINTLQNIKVLQV SDRVFLTHLGGKLATQSRVPLKTRDDLSLAYTPGVARVCRAIADDPEKVYALTWKGNSVAVVSDGSAILGLGNLGPEAAM PVMEGKAILFKELANIDAVPICLRSQDPDVIVQTVEQIAPSFGGINLEDIAAPNCFIVEGRLEESLDMPVMHDDQHGTAV VVLAALRNAVRIVGKRLADVRVVVNGIGAAGTAIIRTLIEAGVGEITAVDRFGILVEGDHARQTPMQRIIASQTNRERRR GDLAVALRGADVFIGVSKGNILTPDHIRVMSSDPIVFALANPIPEGDPDMLRQYARVVATGRSDQPNQINNVLSFPGIFR GALDVHARRITSAMRLAAAEALATVIPPEEMNEDYIVPSVFNRQVVPAIAAAVAQAAIAEGVARRTHMPGD
Specific function: In addition to the NAD-dependent oxidative decarboxylation of L-malate, the enzyme catalyzes the decarboxylation of oxaloacetate [H]
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505145, Length=402, Percent_Identity=27.8606965174129, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI4505143, Length=384, Percent_Identity=24.4791666666667, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI62420882, Length=403, Percent_Identity=24.8138957816377, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI62420880, Length=403, Percent_Identity=24.8138957816377, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI239049447, Length=403, Percent_Identity=24.8138957816377, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI270265879, Length=328, Percent_Identity=27.7439024390244, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1788806, Length=393, Percent_Identity=43.0025445292621, Blast_Score=311, Evalue=7e-86, Organism=Escherichia coli, GI87081919, Length=405, Percent_Identity=27.9012345679012, Blast_Score=94, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17537199, Length=450, Percent_Identity=23.5555555555556, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6322823, Length=315, Percent_Identity=28.2539682539683, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI78707242, Length=392, Percent_Identity=27.2959183673469, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI78707238, Length=392, Percent_Identity=27.2959183673469, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI281362674, Length=392, Percent_Identity=26.2755102040816, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI281362672, Length=392, Percent_Identity=26.2755102040816, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI21356279, Length=392, Percent_Identity=26.2755102040816, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI78707240, Length=389, Percent_Identity=26.7352185089974, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 50513; Mature: 50382
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGVAYTLTLRCQIENRPGMLGRLTTLIGEVGGDIGAIDIVRAERNILVRDITVRVQDE CCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCH QHGEQLVAAINTLQNIKVLQVSDRVFLTHLGGKLATQSRVPLKTRDDLSLAYTPGVARVC HHHHHHHHHHHHHHCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHH RAIADDPEKVYALTWKGNSVAVVSDGSAILGLGNLGPEAAMPVMEGKAILFKELANIDAV HHHCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCHHCCCHHCCCHHHHHHHCCCCCE PICLRSQDPDVIVQTVEQIAPSFGGINLEDIAAPNCFIVEGRLEESLDMPVMHDDQHGTA EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCHHHCCCCCCEECCCCCHH VVVLAALRNAVRIVGKRLADVRVVVNGIGAAGTAIIRTLIEAGVGEITAVDRFGILVEGD HHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECC HARQTPMQRIIASQTNRERRRGDLAVALRGADVFIGVSKGNILTPDHIRVMSSDPIVFAL CCHHHHHHHHHHHHCCHHHHCCCEEEEEECCEEEEEECCCCEECCCCEEEECCCCEEEEE ANPIPEGDPDMLRQYARVVATGRSDQPNQINNVLSFPGIFRGALDVHARRITSAMRLAAA ECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EALATVIPPEEMNEDYIVPSVFNRQVVPAIAAAVAQAAIAEGVARRTHMPGD HHHHHCCCHHHCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVGVAYTLTLRCQIENRPGMLGRLTTLIGEVGGDIGAIDIVRAERNILVRDITVRVQDE CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCH QHGEQLVAAINTLQNIKVLQVSDRVFLTHLGGKLATQSRVPLKTRDDLSLAYTPGVARVC HHHHHHHHHHHHHHCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHH RAIADDPEKVYALTWKGNSVAVVSDGSAILGLGNLGPEAAMPVMEGKAILFKELANIDAV HHHCCCCCCEEEEEECCCEEEEEECCCEEEEECCCCCHHCCCHHCCCHHHHHHHCCCCCE PICLRSQDPDVIVQTVEQIAPSFGGINLEDIAAPNCFIVEGRLEESLDMPVMHDDQHGTA EEEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECCHHHCCCCCCEECCCCCHH VVVLAALRNAVRIVGKRLADVRVVVNGIGAAGTAIIRTLIEAGVGEITAVDRFGILVEGD HHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEEEEECC HARQTPMQRIIASQTNRERRRGDLAVALRGADVFIGVSKGNILTPDHIRVMSSDPIVFAL CCHHHHHHHHHHHHCCHHHHCCCEEEEEECCEEEEEECCCCEECCCCEEEECCCCEEEEE ANPIPEGDPDMLRQYARVVATGRSDQPNQINNVLSFPGIFRGALDVHARRITSAMRLAAA ECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EALATVIPPEEMNEDYIVPSVFNRQVVPAIAAAVAQAAIAEGVARRTHMPGD HHHHHCCCHHHCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2644282 [H]