| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524958
Identifier: 222524958
GI number: 222524958
Start: 2138022
End: 2138654
Strand: Direct
Name: 222524958
Synonym: Chy400_1693
Alternate gene names: NA
Gene position: 2138022-2138654 (Clockwise)
Preceding gene: 222524957
Following gene: 222524959
Centisome position: 40.58
GC content: 58.93
Gene sequence:
>633_bases ATGTACACTGCCGACAGCCCAATTCTTGGCCCGCAAACCGCGGCAATGGATCAGATGAGCCGTTATATCCTCAGTCGTCC ACACGGTGAGTATACCGAAAAGGATATTGCCGATGTGATTATTCCGGCGTATCTCCGGGTCTGTATCCCGGTCGGGGTTG ATCCGGTGCTGGCAGTGGCCCAGATGATCCATGAGACCGGCAACCTTACCAGTTTCTGGAGCCAGCGCCCCCAACGGAAT CCGGCGGGAATTGGGGTAACCGGGCAGTGGCAACTTCATCAGCCGACCGATCTGCGCGGGTGGGCGTATAATACCCAACG TCAGCGTTGGGAAGCCGGGGTAAGTTTTGCGACCTGGGCGGATGATGCGATTCCGGCCCATATTGGTCGTCTACTGGCTT ATGCTCTGCCTGAAGGAAGTGAAACCCCACCGCAGCGGGAACTCATTGCCAAAGCGCTCAGCTACCGGCCATTCCCACGG GCGTTTCGCGGGAGCGCCCAAACCATCAAACAACTGGGTCGCGCCCACAATCCACTTGGTGCCCAGGGGGCCGGTTGGGC CAGTCCTGGCCATACCTACGGTGAGGCGATTGCGCGCCTGGCCAATCAAATTCTGGCTGTACCGCTGGAATGA
Upstream 100 bases:
>100_bases GCAGATTAAAACCGTCTTTGTGAATAATCTCCAATCCATCTACCATCCCAGAGTGGATTATGCGCCATCGCTCGTGCGAA CCTGAAGGAGTAGAGTTGTG
Downstream 100 bases:
>100_bases AACCGAGAGGTATGCTGCGTTCTGGTATGGTTCGAGAAAACGCGAAAGTTCTTTGGTGCGGAAGCACTGCAACCCATTGA TGTATACAATTACCTGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MYTADSPILGPQTAAMDQMSRYILSRPHGEYTEKDIADVIIPAYLRVCIPVGVDPVLAVAQMIHETGNLTSFWSQRPQRN PAGIGVTGQWQLHQPTDLRGWAYNTQRQRWEAGVSFATWADDAIPAHIGRLLAYALPEGSETPPQRELIAKALSYRPFPR AFRGSAQTIKQLGRAHNPLGAQGAGWASPGHTYGEAIARLANQILAVPLE
Sequences:
>Translated_210_residues MYTADSPILGPQTAAMDQMSRYILSRPHGEYTEKDIADVIIPAYLRVCIPVGVDPVLAVAQMIHETGNLTSFWSQRPQRN PAGIGVTGQWQLHQPTDLRGWAYNTQRQRWEAGVSFATWADDAIPAHIGRLLAYALPEGSETPPQRELIAKALSYRPFPR AFRGSAQTIKQLGRAHNPLGAQGAGWASPGHTYGEAIARLANQILAVPLE >Mature_210_residues MYTADSPILGPQTAAMDQMSRYILSRPHGEYTEKDIADVIIPAYLRVCIPVGVDPVLAVAQMIHETGNLTSFWSQRPQRN PAGIGVTGQWQLHQPTDLRGWAYNTQRQRWEAGVSFATWADDAIPAHIGRLLAYALPEGSETPPQRELIAKALSYRPFPR AFRGSAQTIKQLGRAHNPLGAQGAGWASPGHTYGEAIARLANQILAVPLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23032; Mature: 23032
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTADSPILGPQTAAMDQMSRYILSRPHGEYTEKDIADVIIPAYLRVCIPVGVDPVLAVA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QMIHETGNLTSFWSQRPQRNPAGIGVTGQWQLHQPTDLRGWAYNTQRQRWEAGVSFATWA HHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHC DDAIPAHIGRLLAYALPEGSETPPQRELIAKALSYRPFPRAFRGSAQTIKQLGRAHNPLG CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCC AQGAGWASPGHTYGEAIARLANQILAVPLE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYTADSPILGPQTAAMDQMSRYILSRPHGEYTEKDIADVIIPAYLRVCIPVGVDPVLAVA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QMIHETGNLTSFWSQRPQRNPAGIGVTGQWQLHQPTDLRGWAYNTQRQRWEAGVSFATWA HHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHC DDAIPAHIGRLLAYALPEGSETPPQRELIAKALSYRPFPRAFRGSAQTIKQLGRAHNPLG CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCC AQGAGWASPGHTYGEAIARLANQILAVPLE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA