| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yqfF [H]
Identifier: 222524957
GI number: 222524957
Start: 2135829
End: 2138006
Strand: Direct
Name: yqfF [H]
Synonym: Chy400_1692
Alternate gene names: 222524957
Gene position: 2135829-2138006 (Clockwise)
Preceding gene: 222524956
Following gene: 222524958
Centisome position: 40.54
GC content: 54.73
Gene sequence:
>2178_bases ATGAAAGCCATTTCACACCACCGGCTATCACGCTGGTTTGTTCGTCCACAGTGGTTATGGCTGTCGCGCAACCAGTTACG ACAACTGCTGGCGGCACTTTTGTTGTGGACTGGCATCTGGTTCGTATTGACCTTTCGGTTGCCTGGTGCCGATGGCTTGC AGGTGGGTCAACCCAGCCCGCTGAGCATCACGGCACCAGAAGAGGTAACCTTCACCAGCGACGTGCTGACGGCAGAACGC CGTACTCAGGCGGCAAATAATCCTGACAACCTGGTTTATTTTAATGACCCGAAGATACCGATTGACCAACGACGCAATCT GTTCACCTTGCTGGAAACCATTGGCCGTCTGCGTAACGATCCGACGCTAGATGAAGCCGGTCGGCTGCGAGCGTTGAGTA ATCTGCCCAGTGCCGATGTACAACTCAACACCGACCAGGCACGCCTGATCCTTGCCCTCGATGATGAAGAATGGTCGTTG CTACGCACAACCATTCTAAACCTTTATGATCGGGCAATTGAACGGTACGATTACGCAATCGATGAGCGAGCACTCAGCCA ACTGCGCGATCGCTGGTTGAGTTTCTGGCTGGCAACAACCTCGCTCGATACCGCGCAACGGGAACTCGCGCAACAGATCA CCTCGGCCTTTCTGCGCGTCAATCGGACATTAGACAATACAGCTACCGAAGAACGGCGGGCGAAGGCGATGGCCCAGGTC GAACCGGTTGAAGTAAAGGTGCTGGCCGGCGAGATGATTATCCGCGCAGGCGAGATCGTAACGCCGGCCCACATTGAGAA ATTACAGGCAACCGGAGCAATGCCGCGCCCGCTGGGTTGGTCTGAACTGCTTGGGTACGGCTTACTGGCGGCGATCCTGA CCGCAGGTATCAGTGGCTATCTCCACGTATTCCAGCCTAAACTGATGACCCATCCACGCGCACTTACCACCTTAATGTTC AGTATTGTAGTGACGCTGCTCCTGGCACGTCTCACCTTGCTGGTCTACAATGAACGACCCATCTTCTTCCCGCTGGCAGT GCTGGCAGTCGTTACTACGATTGTATTTACAGGTCAGATCGGCTTTGCCGTTAGCCTGCTGGCAGCGGTAGTGATTAGCG TGATGGAAGGGAATGATCTGACGCTGGCCGCAACCCTGTTTGCCAGTTGCACCAGTGCGATCCTGCTGACACGTCAGGCT GATCGGCTCCGTTCGTTTTTAATCGCCGGTTTCGGAGTTACGGCGACAATTACGATCCTGGAGACAACCTTCTGGCTAAG CCAGCAGGCCATCTTTACCCTTTCGGGCTTCAGTGGCTGGATCGCAACCACAGTGTTATCGGCACTTGCCAATGGTGGAT TGACAACCATTCTCACCTTTGGCCTCTTTAATGTGGTTGGCCGACTGGCCGGTCAGGTAACGGCATTGCAGTTGATGGAA CTGGCCCATCCATCACAACCACTCTTACGTAAACTGATTCGGGAAGCTCCGGGCACCTATTACCATAGCGTTGCGGTGGG TAATCTGGCCGAGGCCGCTGCCGAAGCTATCGGCGCCGATGCGCTCTTACTGCGGGTTGCGGCGTATTACCACGACATCG GCAAAACGATACGACCGGCATTTTTTACCGATAATCAAATGGGGCGTGAGAACGTCCATGATGATCTCGATCCGTACATC AGTGCCCAAATCATCATCGACCATGTACGTGAGGGGATCAAAATGGCGCGAGCTGCCCATCTTCCAGAGCAGATTATCGA CTTTATCGCTACCCATCATGGAACCGGCCTGGTGCGCCATTTCTACCAACTCGCCTTACAACGTTACGACCACGTTGATG AGCGTGATTTTCGTTATCCCGGCCCACGTCCCCAAACCCGCGAACAGGCTATCCTGATGCTGGCCGACTCGGTTGAAGCG ACGGTACGGGCCAAAGCCCAACACGGCAAACTCATCGCAAAGCGCAATGGCGACACGAGTGAACGAACAACGCCTGGCGC GGTAACGCTCGATGAGCTGGTGCAATCCATCATCGATGCGCGCGTTCGTGAAGGCGAACTCAACGATGCTCCGCTGACGA TGCGCGAACTAGGGCAGATTAAAACCGTCTTTGTGAATAATCTCCAATCCATCTACCATCCCAGAGTGGATTATGCGCCA TCGCTCGTGCGAACCTGA
Upstream 100 bases:
>100_bases CTGCTCGAACGCTTCAAAGGTCAGGCCGAAAACCGTACAATCAGCCAGGTTGCGCGAGAACTCCTGAGTTCGGCGTAACC CACCCATGTACGAGACGCCT
Downstream 100 bases:
>100_bases AGGAGTAGAGTTGTGATGTACACTGCCGACAGCCCAATTCTTGGCCCGCAAACCGCGGCAATGGATCAGATGAGCCGTTA TATCCTCAGTCGTCCACACG
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MKAISHHRLSRWFVRPQWLWLSRNQLRQLLAALLLWTGIWFVLTFRLPGADGLQVGQPSPLSITAPEEVTFTSDVLTAER RTQAANNPDNLVYFNDPKIPIDQRRNLFTLLETIGRLRNDPTLDEAGRLRALSNLPSADVQLNTDQARLILALDDEEWSL LRTTILNLYDRAIERYDYAIDERALSQLRDRWLSFWLATTSLDTAQRELAQQITSAFLRVNRTLDNTATEERRAKAMAQV EPVEVKVLAGEMIIRAGEIVTPAHIEKLQATGAMPRPLGWSELLGYGLLAAILTAGISGYLHVFQPKLMTHPRALTTLMF SIVVTLLLARLTLLVYNERPIFFPLAVLAVVTTIVFTGQIGFAVSLLAAVVISVMEGNDLTLAATLFASCTSAILLTRQA DRLRSFLIAGFGVTATITILETTFWLSQQAIFTLSGFSGWIATTVLSALANGGLTTILTFGLFNVVGRLAGQVTALQLME LAHPSQPLLRKLIREAPGTYYHSVAVGNLAEAAAEAIGADALLLRVAAYYHDIGKTIRPAFFTDNQMGRENVHDDLDPYI SAQIIIDHVREGIKMARAAHLPEQIIDFIATHHGTGLVRHFYQLALQRYDHVDERDFRYPGPRPQTREQAILMLADSVEA TVRAKAQHGKLIAKRNGDTSERTTPGAVTLDELVQSIIDARVREGELNDAPLTMRELGQIKTVFVNNLQSIYHPRVDYAP SLVRT
Sequences:
>Translated_725_residues MKAISHHRLSRWFVRPQWLWLSRNQLRQLLAALLLWTGIWFVLTFRLPGADGLQVGQPSPLSITAPEEVTFTSDVLTAER RTQAANNPDNLVYFNDPKIPIDQRRNLFTLLETIGRLRNDPTLDEAGRLRALSNLPSADVQLNTDQARLILALDDEEWSL LRTTILNLYDRAIERYDYAIDERALSQLRDRWLSFWLATTSLDTAQRELAQQITSAFLRVNRTLDNTATEERRAKAMAQV EPVEVKVLAGEMIIRAGEIVTPAHIEKLQATGAMPRPLGWSELLGYGLLAAILTAGISGYLHVFQPKLMTHPRALTTLMF SIVVTLLLARLTLLVYNERPIFFPLAVLAVVTTIVFTGQIGFAVSLLAAVVISVMEGNDLTLAATLFASCTSAILLTRQA DRLRSFLIAGFGVTATITILETTFWLSQQAIFTLSGFSGWIATTVLSALANGGLTTILTFGLFNVVGRLAGQVTALQLME LAHPSQPLLRKLIREAPGTYYHSVAVGNLAEAAAEAIGADALLLRVAAYYHDIGKTIRPAFFTDNQMGRENVHDDLDPYI SAQIIIDHVREGIKMARAAHLPEQIIDFIATHHGTGLVRHFYQLALQRYDHVDERDFRYPGPRPQTREQAILMLADSVEA TVRAKAQHGKLIAKRNGDTSERTTPGAVTLDELVQSIIDARVREGELNDAPLTMRELGQIKTVFVNNLQSIYHPRVDYAP SLVRT >Mature_725_residues MKAISHHRLSRWFVRPQWLWLSRNQLRQLLAALLLWTGIWFVLTFRLPGADGLQVGQPSPLSITAPEEVTFTSDVLTAER RTQAANNPDNLVYFNDPKIPIDQRRNLFTLLETIGRLRNDPTLDEAGRLRALSNLPSADVQLNTDQARLILALDDEEWSL LRTTILNLYDRAIERYDYAIDERALSQLRDRWLSFWLATTSLDTAQRELAQQITSAFLRVNRTLDNTATEERRAKAMAQV EPVEVKVLAGEMIIRAGEIVTPAHIEKLQATGAMPRPLGWSELLGYGLLAAILTAGISGYLHVFQPKLMTHPRALTTLMF SIVVTLLLARLTLLVYNERPIFFPLAVLAVVTTIVFTGQIGFAVSLLAAVVISVMEGNDLTLAATLFASCTSAILLTRQA DRLRSFLIAGFGVTATITILETTFWLSQQAIFTLSGFSGWIATTVLSALANGGLTTILTFGLFNVVGRLAGQVTALQLME LAHPSQPLLRKLIREAPGTYYHSVAVGNLAEAAAEAIGADALLLRVAAYYHDIGKTIRPAFFTDNQMGRENVHDDLDPYI SAQIIIDHVREGIKMARAAHLPEQIIDFIATHHGTGLVRHFYQLALQRYDHVDERDFRYPGPRPQTREQAILMLADSVEA TVRAKAQHGKLIAKRNGDTSERTTPGAVTLDELVQSIIDARVREGELNDAPLTMRELGQIKTVFVNNLQSIYHPRVDYAP SLVRT
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 80668; Mature: 80668
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAISHHRLSRWFVRPQWLWLSRNQLRQLLAALLLWTGIWFVLTFRLPGADGLQVGQPSP CCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC LSITAPEEVTFTSDVLTAERRTQAANNPDNLVYFNDPKIPIDQRRNLFTLLETIGRLRND CEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC PTLDEAGRLRALSNLPSADVQLNTDQARLILALDDEEWSLLRTTILNLYDRAIERYDYAI CCCCHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DERALSQLRDRWLSFWLATTSLDTAQRELAQQITSAFLRVNRTLDNTATEERRAKAMAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPVEVKVLAGEMIIRAGEIVTPAHIEKLQATGAMPRPLGWSELLGYGLLAAILTAGISGY CCEEEEEEHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHH LHVFQPKLMTHPRALTTLMFSIVVTLLLARLTLLVYNERPIFFPLAVLAVVTTIVFTGQI HHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCH GFAVSLLAAVVISVMEGNDLTLAATLFASCTSAILLTRQADRLRSFLIAGFGVTATITIL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHH ETTFWLSQQAIFTLSGFSGWIATTVLSALANGGLTTILTFGLFNVVGRLAGQVTALQLME HHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAHPSQPLLRKLIREAPGTYYHSVAVGNLAEAAAEAIGADALLLRVAAYYHDIGKTIRPA HCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC FFTDNQMGRENVHDDLDPYISAQIIIDHVREGIKMARAAHLPEQIIDFIATHHGTGLVRH EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHH FYQLALQRYDHVDERDFRYPGPRPQTREQAILMLADSVEATVRAKAQHGKLIAKRNGDTS HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC ERTTPGAVTLDELVQSIIDARVREGELNDAPLTMRELGQIKTVFVNNLQSIYHPRVDYAP CCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC SLVRT HHHCC >Mature Secondary Structure MKAISHHRLSRWFVRPQWLWLSRNQLRQLLAALLLWTGIWFVLTFRLPGADGLQVGQPSP CCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC LSITAPEEVTFTSDVLTAERRTQAANNPDNLVYFNDPKIPIDQRRNLFTLLETIGRLRND CEEECCCCCEEHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCC PTLDEAGRLRALSNLPSADVQLNTDQARLILALDDEEWSLLRTTILNLYDRAIERYDYAI CCCCHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH DERALSQLRDRWLSFWLATTSLDTAQRELAQQITSAFLRVNRTLDNTATEERRAKAMAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPVEVKVLAGEMIIRAGEIVTPAHIEKLQATGAMPRPLGWSELLGYGLLAAILTAGISGY CCEEEEEEHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHH LHVFQPKLMTHPRALTTLMFSIVVTLLLARLTLLVYNERPIFFPLAVLAVVTTIVFTGQI HHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCH GFAVSLLAAVVISVMEGNDLTLAATLFASCTSAILLTRQADRLRSFLIAGFGVTATITIL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHH ETTFWLSQQAIFTLSGFSGWIATTVLSALANGGLTTILTFGLFNVVGRLAGQVTALQLME HHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LAHPSQPLLRKLIREAPGTYYHSVAVGNLAEAAAEAIGADALLLRVAAYYHDIGKTIRPA HCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC FFTDNQMGRENVHDDLDPYISAQIIIDHVREGIKMARAAHLPEQIIDFIATHHGTGLVRH EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHH FYQLALQRYDHVDERDFRYPGPRPQTREQAILMLADSVEATVRAKAQHGKLIAKRNGDTS HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC ERTTPGAVTLDELVQSIIDARVREGELNDAPLTMRELGQIKTVFVNNLQSIYHPRVDYAP CCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC SLVRT HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]