| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is gltX
Identifier: 222524934
GI number: 222524934
Start: 2099730
End: 2101241
Strand: Direct
Name: gltX
Synonym: Chy400_1668
Alternate gene names: 222524934
Gene position: 2099730-2101241 (Clockwise)
Preceding gene: 222524933
Following gene: 222524936
Centisome position: 39.85
GC content: 58.93
Gene sequence:
>1512_bases ATGAGTTCCATCGAAGGGCCGGTGCGGGTGCGCTTTGCACCCAGCCCAACCGGTAGTTTGCACATTGGCGGTGTACGCAC TGCCCTTTTCAACTGGCTCTGTGCCCGCCACTACGGGGGGCAATTTATTCTACGGATCGAAGATACCGACGAAAAGCGAT TCGTGCCGGGCGCGGCTGACGACATTAGCGCCTCACTGCGCTGGGTGGGTATCGATTGGGACGAAGGGCCAGATGTGGGT GGCCCTTACGGCCCTTACGTGCAATCAGAACGGTTTGAGCAGGGAATCTATCAGCCATTCATCAACCAGCTTCTGGAAGC CGGTCTTGCCTACATGTCGTTTACCACCGAAGAAGAACTGGCTCAGATGCGGGCCGCAGCGGAAGCTGCTGGCATCAAGG CATTTCGCTTCCGTGGCCCGGAGCGTGACTGGCCGCTTGAGCGCCAGCGTGAAGAGGCGGCCAGTGGCAAGCCGTACACC ATCCGGCTCAAAACGCCCCTTGAAGGCGAAACTCGCTTTCGCGATCTGATCCGCGGTGGTGACGAGATTGTGGTGCAGAA TAATCAGTTGCAAGACATTGTGTTGATCAAATCGACCGGAATGCCGGTCTACCACTTCGCCCATCTGGTCGATGATCACT TGATGAAGATCACTCACGTTATGCGTGGCGAAGAGTGGGTACCCAGTACCCCGTACCACGTTCTGCTTTACGACTTCTTC GGCTGGCCGCGCCCGGTCTTTGCCCATTTGCCGGCGATTCTGCGGCAAGATGGCCGTGGCAAGTTGTCGAAGCGCAAAGA CGATGTAGCGACACAGCGATTTCGTGAGCGTGGCTACCTGCCGGAGACAATCTTCAACTATCTCGCCTTGCAGGGATGGA GCTACGATGGCGTGACCGAAATTATGACGCGCGACGAGTTGATTGCGCGTTTCACGCTTGAGCGAATACAACCCTCGCCG GCGCGCTGGAACCCTGAGAAGCTGCGCGACATGAACGGTATCTACATCCGTAAACTGACGACAGAGCAGTTGGCCGAGCG CGTGCTGCCGTTCATGCAACGAGCGGGTCTGATCGGCGATCCGGCAAGCGAGACGGAACGCGCGTATCTCATCAGTTTGA TCCCATTGATTCACGAGCGGCTGGAAGAGTTGCAGGAAGCGCCTGATCTGCTGGCCTTCTTCTACCAGGATGTGGTACCC GGCGAGACGTACAACCCTGCCGATCTGATTCCAAAGAAGCACGACGCGGCGCAAACCGTCGCCTTACTGCGGGCTGCGCA CGAAGCTCTGAGTCAGCAAACCGATTGGACACCACCCGCGCTGGAGACAACGCTGCGCGCCCTCTGCGAACAATTGCAGG TGAAGCCGGGGCCGCTCTTCGGGGCGATTCGCGTCGCCATTACCGGGCGCAGCGTGGCACCACCGCTGTTTGATACGCTC GCCGGTGTAGGACGCGAACGGAGTCTCTCGCGACTGGCGGCGGCGATTGCCGCACTGGAGAACCTGGCATGA
Upstream 100 bases:
>100_bases TTGAGAGGATATTGGCCAATAAACCAGAAACAAACATTGCGAGCAGACACCACAGCACGTACAGCACAGAGAGCTAACCT ATCACAACAAGGAGCATTCC
Downstream 100 bases:
>100_bases GCACTGTACACTGGGAAACCAGTATTCATCACGACGGATCACCGATGTATCTGCGCTTCAGTGGCAGACCAGGTGACACA GCGGTATTTCGGCTCCGTAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MSSIEGPVRVRFAPSPTGSLHIGGVRTALFNWLCARHYGGQFILRIEDTDEKRFVPGAADDISASLRWVGIDWDEGPDVG GPYGPYVQSERFEQGIYQPFINQLLEAGLAYMSFTTEEELAQMRAAAEAAGIKAFRFRGPERDWPLERQREEAASGKPYT IRLKTPLEGETRFRDLIRGGDEIVVQNNQLQDIVLIKSTGMPVYHFAHLVDDHLMKITHVMRGEEWVPSTPYHVLLYDFF GWPRPVFAHLPAILRQDGRGKLSKRKDDVATQRFRERGYLPETIFNYLALQGWSYDGVTEIMTRDELIARFTLERIQPSP ARWNPEKLRDMNGIYIRKLTTEQLAERVLPFMQRAGLIGDPASETERAYLISLIPLIHERLEELQEAPDLLAFFYQDVVP GETYNPADLIPKKHDAAQTVALLRAAHEALSQQTDWTPPALETTLRALCEQLQVKPGPLFGAIRVAITGRSVAPPLFDTL AGVGRERSLSRLAAAIAALENLA
Sequences:
>Translated_503_residues MSSIEGPVRVRFAPSPTGSLHIGGVRTALFNWLCARHYGGQFILRIEDTDEKRFVPGAADDISASLRWVGIDWDEGPDVG GPYGPYVQSERFEQGIYQPFINQLLEAGLAYMSFTTEEELAQMRAAAEAAGIKAFRFRGPERDWPLERQREEAASGKPYT IRLKTPLEGETRFRDLIRGGDEIVVQNNQLQDIVLIKSTGMPVYHFAHLVDDHLMKITHVMRGEEWVPSTPYHVLLYDFF GWPRPVFAHLPAILRQDGRGKLSKRKDDVATQRFRERGYLPETIFNYLALQGWSYDGVTEIMTRDELIARFTLERIQPSP ARWNPEKLRDMNGIYIRKLTTEQLAERVLPFMQRAGLIGDPASETERAYLISLIPLIHERLEELQEAPDLLAFFYQDVVP GETYNPADLIPKKHDAAQTVALLRAAHEALSQQTDWTPPALETTLRALCEQLQVKPGPLFGAIRVAITGRSVAPPLFDTL AGVGRERSLSRLAAAIAALENLA >Mature_502_residues SSIEGPVRVRFAPSPTGSLHIGGVRTALFNWLCARHYGGQFILRIEDTDEKRFVPGAADDISASLRWVGIDWDEGPDVGG PYGPYVQSERFEQGIYQPFINQLLEAGLAYMSFTTEEELAQMRAAAEAAGIKAFRFRGPERDWPLERQREEAASGKPYTI RLKTPLEGETRFRDLIRGGDEIVVQNNQLQDIVLIKSTGMPVYHFAHLVDDHLMKITHVMRGEEWVPSTPYHVLLYDFFG WPRPVFAHLPAILRQDGRGKLSKRKDDVATQRFRERGYLPETIFNYLALQGWSYDGVTEIMTRDELIARFTLERIQPSPA RWNPEKLRDMNGIYIRKLTTEQLAERVLPFMQRAGLIGDPASETERAYLISLIPLIHERLEELQEAPDLLAFFYQDVVPG ETYNPADLIPKKHDAAQTVALLRAAHEALSQQTDWTPPALETTLRALCEQLQVKPGPLFGAIRVAITGRSVAPPLFDTLA GVGRERSLSRLAAAIAALENLA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=507, Percent_Identity=34.3195266272189, Blast_Score=253, Evalue=4e-67, Organism=Escherichia coli, GI1788743, Length=497, Percent_Identity=36.4185110663984, Blast_Score=300, Evalue=1e-82, Organism=Escherichia coli, GI226510925, Length=258, Percent_Identity=32.5581395348837, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1786895, Length=258, Percent_Identity=24.4186046511628, Blast_Score=66, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71993394, Length=490, Percent_Identity=31.8367346938775, Blast_Score=226, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6324540, Length=512, Percent_Identity=32.6171875, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324742, Length=346, Percent_Identity=24.5664739884393, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24665321, Length=506, Percent_Identity=38.3399209486166, Blast_Score=302, Evalue=4e-82,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_CHLAA (A9WAX3)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001635143.1 - GeneID: 5828641 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_1535 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 56742; Mature: 56611
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 264-264
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIEGPVRVRFAPSPTGSLHIGGVRTALFNWLCARHYGGQFILRIEDTDEKRFVPGAAD CCCCCCCEEEEECCCCCCCEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC DISASLRWVGIDWDEGPDVGGPYGPYVQSERFEQGIYQPFINQLLEAGLAYMSFTTEEEL CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AQMRAAAEAAGIKAFRFRGPERDWPLERQREEAASGKPYTIRLKTPLEGETRFRDLIRGG HHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCC DEIVVQNNQLQDIVLIKSTGMPVYHFAHLVDDHLMKITHVMRGEEWVPSTPYHVLLYDFF CEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHC GWPRPVFAHLPAILRQDGRGKLSKRKDDVATQRFRERGYLPETIFNYLALQGWSYDGVTE CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHH IMTRDELIARFTLERIQPSPARWNPEKLRDMNGIYIRKLTTEQLAERVLPFMQRAGLIGD HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCC PASETERAYLISLIPLIHERLEELQEAPDLLAFFYQDVVPGETYNPADLIPKKHDAAQTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHH ALLRAAHEALSQQTDWTPPALETTLRALCEQLQVKPGPLFGAIRVAITGRSVAPPLFDTL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHH AGVGRERSLSRLAAAIAALENLA HCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSIEGPVRVRFAPSPTGSLHIGGVRTALFNWLCARHYGGQFILRIEDTDEKRFVPGAAD CCCCCCEEEEECCCCCCCEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC DISASLRWVGIDWDEGPDVGGPYGPYVQSERFEQGIYQPFINQLLEAGLAYMSFTTEEEL CCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AQMRAAAEAAGIKAFRFRGPERDWPLERQREEAASGKPYTIRLKTPLEGETRFRDLIRGG HHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCC DEIVVQNNQLQDIVLIKSTGMPVYHFAHLVDDHLMKITHVMRGEEWVPSTPYHVLLYDFF CEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHC GWPRPVFAHLPAILRQDGRGKLSKRKDDVATQRFRERGYLPETIFNYLALQGWSYDGVTE CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHH IMTRDELIARFTLERIQPSPARWNPEKLRDMNGIYIRKLTTEQLAERVLPFMQRAGLIGD HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCC PASETERAYLISLIPLIHERLEELQEAPDLLAFFYQDVVPGETYNPADLIPKKHDAAQTV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHH ALLRAAHEALSQQTDWTPPALETTLRALCEQLQVKPGPLFGAIRVAITGRSVAPPLFDTL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHH AGVGRERSLSRLAAAIAALENLA HCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA