| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is icfG [H]
Identifier: 222524867
GI number: 222524867
Start: 2025293
End: 2026816
Strand: Reverse
Name: icfG [H]
Synonym: Chy400_1594
Alternate gene names: 222524867
Gene position: 2026816-2025293 (Counterclockwise)
Preceding gene: 222524868
Following gene: 222524866
Centisome position: 38.47
GC content: 54.99
Gene sequence:
>1524_bases ATGCTCGTCTCGTTGCTCAGCTCGCAGTATACACGCTTTCAGGCCATGGCCGAGGCCTGGTTAGCGCAGGGAGCACAAAC GTTTGGCGTTTACGAACAGGGGCGTCCATTGGCCTATTGGCCGGCAGGTCAGCGTATGCTCCCGCCTGATCTGACAGCGG CTATCTATCGCTACGATGAAGTCATCGGTGAACTGCGACTGACCGGCTTACGCGACGAGGCAGCACGGCAGCGGTTACAG GCAGAGGCGGGGCTGATTAGCTATATCGTCCAGCTTGAGCATGAACTGCAATGCATGACCGCCGATCTGGTTACCAGTCA GGATCAGCAACTGGCGTTGTATCGATTAACCCAGGCCATGCGCGATCTGGTAACCATTCGTGAAACGCTCCAGGCCGTCG TCAATGAAGCACTTCGCATGCTCAAAGGGCGAGCCGGGTTTGCAACGTATGTTGCTGCCAATGGTGGTGAACCGATTGTC GTGCAATCTTCAGCCTGCGGCTTGAACAACGAGGTCATCTGGCGCCTGTATTGGCAACTACAGACAGAAGATCGGCCACT GCTGCTCAGAGAAGATGATGGCGATTTGCGACGACCACCCGGCGTTCACAACTTACTGCTGCTGCCAATACGGGTGCGCG GCATGATGATGGCGAGCCTGGGGATTATTGATCGTGCCGAAGGCTTTGGCACACCGGAGCTAAAATTAGGCCGTGCGATT ACCGATCAGGCTAGCGCGCAAATTGAGCGGATTCTCCTGTACCAGGAAATGGTTGAGCAGGCCAGACTACGCAGTGAGAT GGATCTGGCCCGGCGTGTCCAGACCGATCTCTTGCCCCGCACATTACCGGAAGTAGCCGGTCTGGACATTTACGCATATT CGCGGCCCGCACTCCAGGTGGGGGGTGATTTCTTCGATTTTATCAACATCCCCAATCACCCCTTCATCTTCACGATTGGC GACGTAAGTGGCAAAGGGGTCTCTGCCGCTTTGCTCATGTCGATGACCCGCACCGCCCTGCATAGCAAAGCGCAATTTAT GCCATCGCCGACGCCGGCATCGGTGATGCGGCAATCCAGTGAAGATCTGTACAACGATTTTACCCGGATCGGCGTCTTTG CAACTATCTTTGTTGGTCAGTATGACCACAGCAATCGTGAAATTATGTATACCAATGCCGGTCATGCCCCGGTCATCTAC CGGCCATGCCACGGTAAGGCAGAGTTGCTGTTAGCCGACCACACAGCAGTTGGTGTACTGCCGGTGAACAACTTTCAAAA CCGTTATCTGGCGATGAGGCCGGGTGATCTGCTGATTGTTGCCACCGATGGCTTTAGCGATGCCCGCAATGCCGATGATG AACTGTTTGGGATTGATCGTCTGTTAGCGGCTGTCGATGAGCTGGCCGAACAACCGGCACGGGCAATTGCCGATGGTTTA TTTAGCGTGGTTGATCGGTTTAGTGCCGGTCATCCCCAGGATGATGATCAGACAATCATCGTAATCAAAGGAGCGGCGCT GTGA
Upstream 100 bases:
>100_bases GTGTTAATGATATTTGAACTGACCAGACTCGACAAAGCGTTCACTATTTTTGTTGATGCCGATCATGCACTGTCCGTTTT GAATGCCTGAGAGAACTTCC
Downstream 100 bases:
>100_bases GCCTGCAACACAAGGAAGTGATCCGGCTCGATCTGCCGGCCCGGTATGCCTATTTGCATCTCCTGAGCGAAACAATTGCA GAGTTGCTCCGACAGGTAGA
Product: GAF sensor-containing protein serine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDEVIGELRLTGLRDEAARQRLQ AEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAMRDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIV VQSSACGLNNEVIWRLYWQLQTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQVGGDFFDFINIPNHPFIFTIG DVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSSEDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIY RPCHGKAELLLADHTAVGVLPVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL FSVVDRFSAGHPQDDDQTIIVIKGAAL
Sequences:
>Translated_507_residues MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDEVIGELRLTGLRDEAARQRLQ AEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAMRDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIV VQSSACGLNNEVIWRLYWQLQTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQVGGDFFDFINIPNHPFIFTIG DVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSSEDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIY RPCHGKAELLLADHTAVGVLPVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL FSVVDRFSAGHPQDDDQTIIVIKGAAL >Mature_507_residues MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDEVIGELRLTGLRDEAARQRLQ AEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAMRDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIV VQSSACGLNNEVIWRLYWQLQTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQVGGDFFDFINIPNHPFIFTIG DVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSSEDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIY RPCHGKAELLLADHTAVGVLPVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL FSVVDRFSAGHPQDDDQTIIVIKGAAL
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 56269; Mature: 56269
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDE CCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH VIGELRLTGLRDEAARQRLQAEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAM HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIVVQSSACGLNNEVIWRLYWQL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEE QTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI ECCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHH GGDFFDFINIPNHPFIFTIGDVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSS CCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIYRPCHGKAELLLADHTAVGVL HHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCEEEECCCCCEEEEEECCCEEEEE PVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL ECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVVDRFSAGHPQDDDQTIIVIKGAAL HHHHHHHCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDE CCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH VIGELRLTGLRDEAARQRLQAEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAM HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIVVQSSACGLNNEVIWRLYWQL HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEE QTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI ECCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHH GGDFFDFINIPNHPFIFTIGDVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSS CCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIYRPCHGKAELLLADHTAVGVL HHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCEEEECCCCCEEEEEECCCEEEEE PVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL ECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSVVDRFSAGHPQDDDQTIIVIKGAAL HHHHHHHCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]