Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is icfG [H]

Identifier: 222524867

GI number: 222524867

Start: 2025293

End: 2026816

Strand: Reverse

Name: icfG [H]

Synonym: Chy400_1594

Alternate gene names: 222524867

Gene position: 2026816-2025293 (Counterclockwise)

Preceding gene: 222524868

Following gene: 222524866

Centisome position: 38.47

GC content: 54.99

Gene sequence:

>1524_bases
ATGCTCGTCTCGTTGCTCAGCTCGCAGTATACACGCTTTCAGGCCATGGCCGAGGCCTGGTTAGCGCAGGGAGCACAAAC
GTTTGGCGTTTACGAACAGGGGCGTCCATTGGCCTATTGGCCGGCAGGTCAGCGTATGCTCCCGCCTGATCTGACAGCGG
CTATCTATCGCTACGATGAAGTCATCGGTGAACTGCGACTGACCGGCTTACGCGACGAGGCAGCACGGCAGCGGTTACAG
GCAGAGGCGGGGCTGATTAGCTATATCGTCCAGCTTGAGCATGAACTGCAATGCATGACCGCCGATCTGGTTACCAGTCA
GGATCAGCAACTGGCGTTGTATCGATTAACCCAGGCCATGCGCGATCTGGTAACCATTCGTGAAACGCTCCAGGCCGTCG
TCAATGAAGCACTTCGCATGCTCAAAGGGCGAGCCGGGTTTGCAACGTATGTTGCTGCCAATGGTGGTGAACCGATTGTC
GTGCAATCTTCAGCCTGCGGCTTGAACAACGAGGTCATCTGGCGCCTGTATTGGCAACTACAGACAGAAGATCGGCCACT
GCTGCTCAGAGAAGATGATGGCGATTTGCGACGACCACCCGGCGTTCACAACTTACTGCTGCTGCCAATACGGGTGCGCG
GCATGATGATGGCGAGCCTGGGGATTATTGATCGTGCCGAAGGCTTTGGCACACCGGAGCTAAAATTAGGCCGTGCGATT
ACCGATCAGGCTAGCGCGCAAATTGAGCGGATTCTCCTGTACCAGGAAATGGTTGAGCAGGCCAGACTACGCAGTGAGAT
GGATCTGGCCCGGCGTGTCCAGACCGATCTCTTGCCCCGCACATTACCGGAAGTAGCCGGTCTGGACATTTACGCATATT
CGCGGCCCGCACTCCAGGTGGGGGGTGATTTCTTCGATTTTATCAACATCCCCAATCACCCCTTCATCTTCACGATTGGC
GACGTAAGTGGCAAAGGGGTCTCTGCCGCTTTGCTCATGTCGATGACCCGCACCGCCCTGCATAGCAAAGCGCAATTTAT
GCCATCGCCGACGCCGGCATCGGTGATGCGGCAATCCAGTGAAGATCTGTACAACGATTTTACCCGGATCGGCGTCTTTG
CAACTATCTTTGTTGGTCAGTATGACCACAGCAATCGTGAAATTATGTATACCAATGCCGGTCATGCCCCGGTCATCTAC
CGGCCATGCCACGGTAAGGCAGAGTTGCTGTTAGCCGACCACACAGCAGTTGGTGTACTGCCGGTGAACAACTTTCAAAA
CCGTTATCTGGCGATGAGGCCGGGTGATCTGCTGATTGTTGCCACCGATGGCTTTAGCGATGCCCGCAATGCCGATGATG
AACTGTTTGGGATTGATCGTCTGTTAGCGGCTGTCGATGAGCTGGCCGAACAACCGGCACGGGCAATTGCCGATGGTTTA
TTTAGCGTGGTTGATCGGTTTAGTGCCGGTCATCCCCAGGATGATGATCAGACAATCATCGTAATCAAAGGAGCGGCGCT
GTGA

Upstream 100 bases:

>100_bases
GTGTTAATGATATTTGAACTGACCAGACTCGACAAAGCGTTCACTATTTTTGTTGATGCCGATCATGCACTGTCCGTTTT
GAATGCCTGAGAGAACTTCC

Downstream 100 bases:

>100_bases
GCCTGCAACACAAGGAAGTGATCCGGCTCGATCTGCCGGCCCGGTATGCCTATTTGCATCTCCTGAGCGAAACAATTGCA
GAGTTGCTCCGACAGGTAGA

Product: GAF sensor-containing protein serine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDEVIGELRLTGLRDEAARQRLQ
AEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAMRDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIV
VQSSACGLNNEVIWRLYWQLQTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI
TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQVGGDFFDFINIPNHPFIFTIG
DVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSSEDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIY
RPCHGKAELLLADHTAVGVLPVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL
FSVVDRFSAGHPQDDDQTIIVIKGAAL

Sequences:

>Translated_507_residues
MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDEVIGELRLTGLRDEAARQRLQ
AEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAMRDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIV
VQSSACGLNNEVIWRLYWQLQTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI
TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQVGGDFFDFINIPNHPFIFTIG
DVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSSEDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIY
RPCHGKAELLLADHTAVGVLPVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL
FSVVDRFSAGHPQDDDQTIIVIKGAAL
>Mature_507_residues
MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDEVIGELRLTGLRDEAARQRLQ
AEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAMRDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIV
VQSSACGLNNEVIWRLYWQLQTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI
TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQVGGDFFDFINIPNHPFIFTIG
DVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSSEDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIY
RPCHGKAELLLADHTAVGVLPVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL
FSVVDRFSAGHPQDDDQTIIVIKGAAL

Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003660
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]

EC number: NA

Molecular weight: Translated: 56269; Mature: 56269

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDE
CCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH
VIGELRLTGLRDEAARQRLQAEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIVVQSSACGLNNEVIWRLYWQL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEE
QTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI
ECCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHH
GGDFFDFINIPNHPFIFTIGDVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSS
CCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIYRPCHGKAELLLADHTAVGVL
HHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCEEEECCCCCEEEEEECCCEEEEE
PVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL
ECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSVVDRFSAGHPQDDDQTIIVIKGAAL
HHHHHHHCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLVSLLSSQYTRFQAMAEAWLAQGAQTFGVYEQGRPLAYWPAGQRMLPPDLTAAIYRYDE
CCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH
VIGELRLTGLRDEAARQRLQAEAGLISYIVQLEHELQCMTADLVTSQDQQLALYRLTQAM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RDLVTIRETLQAVVNEALRMLKGRAGFATYVAANGGEPIVVQSSACGLNNEVIWRLYWQL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCCEEEEEEEEE
QTEDRPLLLREDDGDLRRPPGVHNLLLLPIRVRGMMMASLGIIDRAEGFGTPELKLGRAI
ECCCCCEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
TDQASAQIERILLYQEMVEQARLRSEMDLARRVQTDLLPRTLPEVAGLDIYAYSRPALQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHH
GGDFFDFINIPNHPFIFTIGDVSGKGVSAALLMSMTRTALHSKAQFMPSPTPASVMRQSS
CCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EDLYNDFTRIGVFATIFVGQYDHSNREIMYTNAGHAPVIYRPCHGKAELLLADHTAVGVL
HHHHHHHHHHHHHHHEEEECCCCCCCEEEEECCCCCCEEEECCCCCEEEEEECCCEEEEE
PVNNFQNRYLAMRPGDLLIVATDGFSDARNADDELFGIDRLLAAVDELAEQPARAIADGL
ECCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSVVDRFSAGHPQDDDQTIIVIKGAAL
HHHHHHHCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8075401; 8905231 [H]