| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524866
Identifier: 222524866
GI number: 222524866
Start: 2024856
End: 2025296
Strand: Reverse
Name: 222524866
Synonym: Chy400_1593
Alternate gene names: NA
Gene position: 2025296-2024856 (Counterclockwise)
Preceding gene: 222524867
Following gene: 222524865
Centisome position: 38.44
GC content: 50.79
Gene sequence:
>441_bases GTGAGCCTGCAACACAAGGAAGTGATCCGGCTCGATCTGCCGGCCCGGTATGCCTATTTGCATCTCCTGAGCGAAACAAT TGCAGAGTTGCTCCGACAGGTAGATGCAGTCAATGAAACGCTGGTATACAATATACAGCTCGCAGCCCACGAAGTCTGCA CAAACATCGTTAGCCATGCCTATCACAATCGGCAAAACGGTGAGGATCGGATCAGAGTGACACTCGTCTTGCATCCACAG CCGGCTCGCCTGGAGATTGAGTTGCATGATACGGGTGATTCGTTTGATCCGGAGCTGGTACCACAACCCAATCTGGTCGA AGCCCAAATTCATGGCTATGGCCTCTTCTTAATCCGTCACTTGATGGATCACGTTGCATATACATCGCGTGCGGATGGTA ACTACTGGCATTTGGTGAAGTATCTGGTATCGGGGAGATAA
Upstream 100 bases:
>100_bases GGGCAATTGCCGATGGTTTATTTAGCGTGGTTGATCGGTTTAGTGCCGGTCATCCCCAGGATGATGATCAGACAATCATC GTAATCAAAGGAGCGGCGCT
Downstream 100 bases:
>100_bases ACGTTATGACGACAATTATGATAGTTGATGATTACGTTCCCAGCCATCGGCTGATGAGTTTTGTCCTCGAACAGTACGGT TATACAGTGGTTACCGCTAT
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: RsbW Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSLQHKEVIRLDLPARYAYLHLLSETIAELLRQVDAVNETLVYNIQLAAHEVCTNIVSHAYHNRQNGEDRIRVTLVLHPQ PARLEIELHDTGDSFDPELVPQPNLVEAQIHGYGLFLIRHLMDHVAYTSRADGNYWHLVKYLVSGR
Sequences:
>Translated_146_residues MSLQHKEVIRLDLPARYAYLHLLSETIAELLRQVDAVNETLVYNIQLAAHEVCTNIVSHAYHNRQNGEDRIRVTLVLHPQ PARLEIELHDTGDSFDPELVPQPNLVEAQIHGYGLFLIRHLMDHVAYTSRADGNYWHLVKYLVSGR >Mature_145_residues SLQHKEVIRLDLPARYAYLHLLSETIAELLRQVDAVNETLVYNIQLAAHEVCTNIVSHAYHNRQNGEDRIRVTLVLHPQP ARLEIELHDTGDSFDPELVPQPNLVEAQIHGYGLFLIRHLMDHVAYTSRADGNYWHLVKYLVSGR
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16810; Mature: 16679
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQHKEVIRLDLPARYAYLHLLSETIAELLRQVDAVNETLVYNIQLAAHEVCTNIVSHA CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH YHNRQNGEDRIRVTLVLHPQPARLEIELHDTGDSFDPELVPQPNLVEAQIHGYGLFLIRH HHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHH LMDHVAYTSRADGNYWHLVKYLVSGR HHHHHHHCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SLQHKEVIRLDLPARYAYLHLLSETIAELLRQVDAVNETLVYNIQLAAHEVCTNIVSHA CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH YHNRQNGEDRIRVTLVLHPQPARLEIELHDTGDSFDPELVPQPNLVEAQIHGYGLFLIRH HHCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHH LMDHVAYTSRADGNYWHLVKYLVSGR HHHHHHHCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA