| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524693
Identifier: 222524693
GI number: 222524693
Start: 1802580
End: 1803245
Strand: Reverse
Name: 222524693
Synonym: Chy400_1420
Alternate gene names: NA
Gene position: 1803245-1802580 (Counterclockwise)
Preceding gene: 222524694
Following gene: 222524691
Centisome position: 34.22
GC content: 59.91
Gene sequence:
>666_bases GTGAGCGTGCATCCAGCGCTCGTGATGATGGCCCGTCGCCCTGAACCGGGACGGGTTAAGACCCGTTTGTGCCCGCCTTT GACCCCAGAGCAGGCAACTACTCTGTACGAAGCGTTTCTTTATGATTTGACGGCGTTGTTGCGGAGTGTACGTGGGGTGC AGCCGATCATCGCGTATGCGCCGGAAACCGCTGCCGATTACTTTGCCCGCCTTGCCCCTGACCTTGCCCACCGGCCACAG GTTGGCGCTGATTTGGGTGAACGGCTGGCCAACATCACCGATGCGCTCCTGAACGAAGGCGCGCCGGCAGTGGTTGTGAT CGGGAGCGATAGCCCTGATTTGCCGGTGGCCTTCATCGAACAGGCTATTGCTGAATTAGCGCAAGGGGCCGATCTTGTGC TGGGGCCGGCCAGTGATGGTGGTTACTATCTGGTTGGGTTGCGCCGACCGGCACCAACCCTCTTCACCGGCGTCACCATG AGTACGCCAACCGTACTGCGTGATACGCTGGCGATTGCCGAACAACTGCGGCTTCAGACCTCGCTCCTTCCCCTTTGGTA TGACATCGACACCTTTACTGATCTGCACCGCTTGATCGCCAGTTCAGCCTCTCTGACCCACACCCGGCCACTATTGGAGC ACGTGCTGGCACAGGCTGGAGGATGA
Upstream 100 bases:
>100_bases CCATCGCCGATCTGGCCGGACGCGAGATTCGCACCGCAGCACACTGTTACGCATGCACCGCAGCCGCCGGCTCCACCTGA ACAGGCGCTATCGGCACGCC
Downstream 100 bases:
>100_bases CGTGGTGGCAGATATATCAATCATCCCCCACAAAACACACACTGCACACAAAGGTTTGCGCACGTTTCACGAGACATAAA CCCCGGCTTCAATCCACTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSVHPALVMMARRPEPGRVKTRLCPPLTPEQATTLYEAFLYDLTALLRSVRGVQPIIAYAPETAADYFARLAPDLAHRPQ VGADLGERLANITDALLNEGAPAVVVIGSDSPDLPVAFIEQAIAELAQGADLVLGPASDGGYYLVGLRRPAPTLFTGVTM STPTVLRDTLAIAEQLRLQTSLLPLWYDIDTFTDLHRLIASSASLTHTRPLLEHVLAQAGG
Sequences:
>Translated_221_residues MSVHPALVMMARRPEPGRVKTRLCPPLTPEQATTLYEAFLYDLTALLRSVRGVQPIIAYAPETAADYFARLAPDLAHRPQ VGADLGERLANITDALLNEGAPAVVVIGSDSPDLPVAFIEQAIAELAQGADLVLGPASDGGYYLVGLRRPAPTLFTGVTM STPTVLRDTLAIAEQLRLQTSLLPLWYDIDTFTDLHRLIASSASLTHTRPLLEHVLAQAGG >Mature_220_residues SVHPALVMMARRPEPGRVKTRLCPPLTPEQATTLYEAFLYDLTALLRSVRGVQPIIAYAPETAADYFARLAPDLAHRPQV GADLGERLANITDALLNEGAPAVVVIGSDSPDLPVAFIEQAIAELAQGADLVLGPASDGGYYLVGLRRPAPTLFTGVTMS TPTVLRDTLAIAEQLRLQTSLLPLWYDIDTFTDLHRLIASSASLTHTRPLLEHVLAQAGG
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23728; Mature: 23596
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVHPALVMMARRPEPGRVKTRLCPPLTPEQATTLYEAFLYDLTALLRSVRGVQPIIAYA CCCCHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC PETAADYFARLAPDLAHRPQVGADLGERLANITDALLNEGAPAVVVIGSDSPDLPVAFIE CCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH QAIAELAQGADLVLGPASDGGYYLVGLRRPAPTLFTGVTMSTPTVLRDTLAIAEQLRLQT HHHHHHHCCCCEEEECCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH SLLPLWYDIDTFTDLHRLIASSASLTHTRPLLEHVLAQAGG HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVHPALVMMARRPEPGRVKTRLCPPLTPEQATTLYEAFLYDLTALLRSVRGVQPIIAYA CCCHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC PETAADYFARLAPDLAHRPQVGADLGERLANITDALLNEGAPAVVVIGSDSPDLPVAFIE CCHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHH QAIAELAQGADLVLGPASDGGYYLVGLRRPAPTLFTGVTMSTPTVLRDTLAIAEQLRLQT HHHHHHHCCCCEEEECCCCCCEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH SLLPLWYDIDTFTDLHRLIASSASLTHTRPLLEHVLAQAGG HHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA