Click here to switch to the map view.

The map label for this gene is 222524675

Identifier: 222524675

GI number: 222524675

Start: 1785073

End: 1786074

Strand: Reverse

Name: 222524675

Synonym: Chy400_1402

Alternate gene names: NA

Gene position: 1786074-1785073 (Counterclockwise)

Preceding gene: 222524682

Following gene: 222524674

Centisome position: 33.9

GC content: 56.29

Gene sequence:

>1002_bases
ATGTCATCGCTGGCCACATTAGCGCAACCGCTTGCCGATGGAACATTTCAGTGTCTGGCATGTCAGTGGCGTTGCACGCT
GGCACCGGGCGAGATTGGGCGTTGTCACATGCGTATCGGTCGTGAAGAAGGGATCGAATTGATCAATCACGGCATGATCA
GCGGAGCAGCGATTGGCCCGGTTGAGGATCATCGTCTCTGGCATTTCTTCCCGGATACGACGGTGTTGGCGATTGGCGGA
TGGGGCTATGCGCTACCTATCGATCAGCAGCGTGGTCCTTACGGCACATTACCAACCGAACCGGCAAAGCAGCGTCGGCT
TGAACCGCAACGGGCCGCCGATTTTGCGCTCGAACGGCTTTGCCGCGGTGTGGTGTGGGCATTTGGTGAGCCGGCGGTCA
ATTTTGAATATGTGCTGGCGCTGCTGCAACTGAGCCGTGCTGCCAGCCGCTATACGGCGATTGTAACCAGCGGTATGCTG
AGTCTGGAAGCCTTGAATGAACTAGGACCGTACCTTAACGGCATTAGCCTCGACCTGCGCGGCTTTTCCGATAATGCGTA
CCAACGGTTGGGTGGGATAAGCGACTGGCGCCACATTCTCCGTTTTGCCGAAGAGGCACAGCAGCGCTGGAAATGTCATA
TTGAAATTACGACCCGTATTCATCACGGCGTCAATGATCACCCCGATGAGCTGCGTGATCTGGTTGAGTGGATCAAGAAG
ACCCTGGGTGAGGAAACGCCGTGGCATGTGTTGCCAGGTGATGCCGGGAGCGAGACGGCGGCGGCAACCAAGCAGGCTCG
TCGTATCGGCCACGAGGGTGGCTTGCAGTTCATTTACGGTCACGAGCCTAATCAGCCCACACGTTGTCCGTCCTGCCACG
CAACGCTGATTAATCGGCAGCACGGTGTGAGCCGGCGGGTTGGTCTCGATGGCAATCGCTGTAGTAATTGTGGTTATGCC
ACGAATTTGTATCTATCGATCTTTAAGGTGCATCGCACGTAA

Upstream 100 bases:

>100_bases
AGATGGTATGCGGAGGGAAGGTTTCCCTCCGCCACCCATGGCATTATACTCGAATGAACGGCAAATTGCCAGTCCGTAGC
AATAAAGGAACGTCGATCCT

Downstream 100 bases:

>100_bases
TGTTGTTGTTAAACAGCAGACGACGCTAAAGGAGCGAGTTCTGCATTCGTAGCATCGAGAGCACCTCACCGACTATTGGT
TGCACACTGTGTGTCCTGTG

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MSSLATLAQPLADGTFQCLACQWRCTLAPGEIGRCHMRIGREEGIELINHGMISGAAIGPVEDHRLWHFFPDTTVLAIGG
WGYALPIDQQRGPYGTLPTEPAKQRRLEPQRAADFALERLCRGVVWAFGEPAVNFEYVLALLQLSRAASRYTAIVTSGML
SLEALNELGPYLNGISLDLRGFSDNAYQRLGGISDWRHILRFAEEAQQRWKCHIEITTRIHHGVNDHPDELRDLVEWIKK
TLGEETPWHVLPGDAGSETAAATKQARRIGHEGGLQFIYGHEPNQPTRCPSCHATLINRQHGVSRRVGLDGNRCSNCGYA
TNLYLSIFKVHRT

Sequences:

>Translated_333_residues
MSSLATLAQPLADGTFQCLACQWRCTLAPGEIGRCHMRIGREEGIELINHGMISGAAIGPVEDHRLWHFFPDTTVLAIGG
WGYALPIDQQRGPYGTLPTEPAKQRRLEPQRAADFALERLCRGVVWAFGEPAVNFEYVLALLQLSRAASRYTAIVTSGML
SLEALNELGPYLNGISLDLRGFSDNAYQRLGGISDWRHILRFAEEAQQRWKCHIEITTRIHHGVNDHPDELRDLVEWIKK
TLGEETPWHVLPGDAGSETAAATKQARRIGHEGGLQFIYGHEPNQPTRCPSCHATLINRQHGVSRRVGLDGNRCSNCGYA
TNLYLSIFKVHRT
>Mature_332_residues
SSLATLAQPLADGTFQCLACQWRCTLAPGEIGRCHMRIGREEGIELINHGMISGAAIGPVEDHRLWHFFPDTTVLAIGGW
GYALPIDQQRGPYGTLPTEPAKQRRLEPQRAADFALERLCRGVVWAFGEPAVNFEYVLALLQLSRAASRYTAIVTSGMLS
LEALNELGPYLNGISLDLRGFSDNAYQRLGGISDWRHILRFAEEAQQRWKCHIEITTRIHHGVNDHPDELRDLVEWIKKT
LGEETPWHVLPGDAGSETAAATKQARRIGHEGGLQFIYGHEPNQPTRCPSCHATLINRQHGVSRRVGLDGNRCSNCGYAT
NLYLSIFKVHRT

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37124; Mature: 36992

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLATLAQPLADGTFQCLACQWRCTLAPGEIGRCHMRIGREEGIELINHGMISGAAIGP
CCCHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCC
VEDHRLWHFFPDTTVLAIGGWGYALPIDQQRGPYGTLPTEPAKQRRLEPQRAADFALERL
CCCCCEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
CRGVVWAFGEPAVNFEYVLALLQLSRAASRYTAIVTSGMLSLEALNELGPYLNGISLDLR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GFSDNAYQRLGGISDWRHILRFAEEAQQRWKCHIEITTRIHHGVNDHPDELRDLVEWIKK
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
TLGEETPWHVLPGDAGSETAAATKQARRIGHEGGLQFIYGHEPNQPTRCPSCHATLINRQ
HHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
HGVSRRVGLDGNRCSNCGYATNLYLSIFKVHRT
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECC
>Mature Secondary Structure 
SSLATLAQPLADGTFQCLACQWRCTLAPGEIGRCHMRIGREEGIELINHGMISGAAIGP
CCHHHHHHHHCCCCEEEEEEEEEEEECCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCC
VEDHRLWHFFPDTTVLAIGGWGYALPIDQQRGPYGTLPTEPAKQRRLEPQRAADFALERL
CCCCCEEEECCCCEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
CRGVVWAFGEPAVNFEYVLALLQLSRAASRYTAIVTSGMLSLEALNELGPYLNGISLDLR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GFSDNAYQRLGGISDWRHILRFAEEAQQRWKCHIEITTRIHHGVNDHPDELRDLVEWIKK
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH
TLGEETPWHVLPGDAGSETAAATKQARRIGHEGGLQFIYGHEPNQPTRCPSCHATLINRQ
HHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
HGVSRRVGLDGNRCSNCGYATNLYLSIFKVHRT
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]