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The map label for this gene is dapB [H]

Identifier: 222524670

GI number: 222524670

Start: 1779236

End: 1780036

Strand: Reverse

Name: dapB [H]

Synonym: Chy400_1397

Alternate gene names: 222524670

Gene position: 1780036-1779236 (Counterclockwise)

Preceding gene: 222524671

Following gene: 222524663

Centisome position: 33.78

GC content: 59.93

Gene sequence:

>801_bases
ATGACGATTCGGGTGTGCCTGGCGGGTGCGACCGGATGGGCCGGTTCGGCACTTGCCCGTGCGATTGCGCAAACTGACGA
TATTGTGCTGAGTGCTGCGCTAAGCCGCCGCGCTGCCGGGCAGTCGCTGGCCGATGTGTTGGGTGAACCACGACTGACGT
GTCCTGTCTACGCGACCGCTGCTGAAGCATTGACGCAGCCGTGTGATGTCTTTTTCGAGTATACCCGTCCTGACGTTGCG
AAAGCCAATGTCTTGACCGCCCTGCAACACGGATGTCACGTGGTGATTGGTACTTCGGGGCTGAGTGATGACGACTATCG
CGAGATTGATGCAGTGGCAACAGCGCAGCAACGGGGCGTGCTGGCAGCAGGCAACTTTGCTTTGACTGCCGTCTTGCTGC
AACGGTTTGCCAGTATTGCTGCCCGCTACATCGAACAGTGGGAGATCATCGATTATGCCCGCGATAGCAAACCGGACGCA
CCGAGCGGGACAGCGCGTGAACTGGCTGCCAGGCTGGGGCAGATTCGCTCGTCGCATCTGAGCGTACCGCTTGAGCAAAC
CCAGGGTGTTCCGGCAACCCGTGGTGCCCGCCTAAACGGCATGCAAGTGCATTCGGTGCGTCTACCGGGCTACACAATCG
GGCTGGAAATCATCTTTGGCATGCCCGACCAGCGGCTGAGCATTCGCCATGATGCCGGTGCCAGTGCCGAACCCTATGTC
GCCGGAGCACTGTTGGCCATCCGGCGCGTGGGGAAACTGGTTGGTCTGCATCGGGGACTTGATAGTGTCTTAGAGCTGTA
G

Upstream 100 bases:

>100_bases
GGTCGAGCTGCACTGGGCCTGTCTGGCGCAAGACGTTGTTCCTTATCAGACGATCTACGCCGGTGAGTGGTGACCTTATG
AGCGATAGGCGAGGTTTTCT

Downstream 100 bases:

>100_bases
AAACCTGAGCATGTGAAGCAGGTATGCCGCTCGTGCGCATAGGTACGGTGCAGAGGCTCCCACAGCTCGCACATCCACGC
CGGTATCATTGCGCTTATGT

Product: dihydrodipicolinate reductase

Products: NA

Alternate protein names: DHPR [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTIRVCLAGATGWAGSALARAIAQTDDIVLSAALSRRAAGQSLADVLGEPRLTCPVYATAAEALTQPCDVFFEYTRPDVA
KANVLTALQHGCHVVIGTSGLSDDDYREIDAVATAQQRGVLAAGNFALTAVLLQRFASIAARYIEQWEIIDYARDSKPDA
PSGTARELAARLGQIRSSHLSVPLEQTQGVPATRGARLNGMQVHSVRLPGYTIGLEIIFGMPDQRLSIRHDAGASAEPYV
AGALLAIRRVGKLVGLHRGLDSVLEL

Sequences:

>Translated_266_residues
MTIRVCLAGATGWAGSALARAIAQTDDIVLSAALSRRAAGQSLADVLGEPRLTCPVYATAAEALTQPCDVFFEYTRPDVA
KANVLTALQHGCHVVIGTSGLSDDDYREIDAVATAQQRGVLAAGNFALTAVLLQRFASIAARYIEQWEIIDYARDSKPDA
PSGTARELAARLGQIRSSHLSVPLEQTQGVPATRGARLNGMQVHSVRLPGYTIGLEIIFGMPDQRLSIRHDAGASAEPYV
AGALLAIRRVGKLVGLHRGLDSVLEL
>Mature_265_residues
TIRVCLAGATGWAGSALARAIAQTDDIVLSAALSRRAAGQSLADVLGEPRLTCPVYATAAEALTQPCDVFFEYTRPDVAK
ANVLTALQHGCHVVIGTSGLSDDDYREIDAVATAQQRGVLAAGNFALTAVLLQRFASIAARYIEQWEIIDYARDSKPDAP
SGTARELAARLGQIRSSHLSVPLEQTQGVPATRGARLNGMQVHSVRLPGYTIGLEIIFGMPDQRLSIRHDAGASAEPYVA
GALLAIRRVGKLVGLHRGLDSVLEL

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; second step. [C]

COG id: COG0289

COG function: function code E; Dihydrodipicolinate reductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dihydrodipicolinate reductase family [H]

Homologues:

Organism=Escherichia coli, GI1786214, Length=170, Percent_Identity=31.7647058823529, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022663
- InterPro:   IPR000846
- InterPro:   IPR022664
- InterPro:   IPR011770
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05173 DapB_C; PF01113 DapB_N [H]

EC number: =1.3.1.26 [H]

Molecular weight: Translated: 28224; Mature: 28092

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRVCLAGATGWAGSALARAIAQTDDIVLSAALSRRAAGQSLADVLGEPRLTCPVYATA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHH
AEALTQPCDVFFEYTRPDVAKANVLTALQHGCHVVIGTSGLSDDDYREIDAVATAQQRGV
HHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCE
LAAGNFALTAVLLQRFASIAARYIEQWEIIDYARDSKPDAPSGTARELAARLGQIRSSHL
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
SVPLEQTQGVPATRGARLNGMQVHSVRLPGYTIGLEIIFGMPDQRLSIRHDAGASAEPYV
CCCHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEECCCCCCCCCHH
AGALLAIRRVGKLVGLHRGLDSVLEL
HHHHHHHHHHHHHHHHHHCHHHHHCC
>Mature Secondary Structure 
TIRVCLAGATGWAGSALARAIAQTDDIVLSAALSRRAAGQSLADVLGEPRLTCPVYATA
EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHH
AEALTQPCDVFFEYTRPDVAKANVLTALQHGCHVVIGTSGLSDDDYREIDAVATAQQRGV
HHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCE
LAAGNFALTAVLLQRFASIAARYIEQWEIIDYARDSKPDAPSGTARELAARLGQIRSSHL
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC
SVPLEQTQGVPATRGARLNGMQVHSVRLPGYTIGLEIIFGMPDQRLSIRHDAGASAEPYV
CCCHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEECCCCCCCCCHH
AGALLAIRRVGKLVGLHRGLDSVLEL
HHHHHHHHHHHHHHHHHHCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA