| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524663
Identifier: 222524663
GI number: 222524663
Start: 1771577
End: 1772686
Strand: Reverse
Name: 222524663
Synonym: Chy400_1390
Alternate gene names: NA
Gene position: 1772686-1771577 (Counterclockwise)
Preceding gene: 222524670
Following gene: 222524662
Centisome position: 33.64
GC content: 55.59
Gene sequence:
>1110_bases ATGCGCAGCATCTCTCGTACAATTGCCGGTGTATATCTTCTGGCGACTGCTCTGCTGGCGATCACCACTGTTATATGGGG TCCAATTGGTTGGGCACCGCTACCGTTACCCACCGCCGCACCACCGATTCAGATCGATGTGGCAATGAGTTCCGAGAAGG AGGCATGGATTCGTAGTGCGCTTGAACGCTTTGCCCAAACGAACCCGACGATCAACGGACGGCGCATCGAGGTACGTTTG CGAGTATCCGGTTCGCGAGAGTTGATTGACGCAATCGGGCAGGGGTACCAGCCAACGATTATCAGTCCGTCGAGTAGCAT TCAGTTAGTTGAGCTGCAACAGCAGTATCCCGATCTCTTGCGTGACCCGGCCTCGCCACTGGCACTCACCCCAATAGTGG CGCTGATGCGTGATGCCCCTTCGACAAATGGCATTACCAATCCCTGGCAACTCTGGCAACGTCAACTTCCTGATCAAATA AACCAGCTTAAGCTCGGCATCTCCTCGCCGGTGCAGAGTAATGGTGGATTGCAGTCCCTGATCATTCTGGCTGCACAGTA CCACCAAACTGCCAGCCTGACGGTTGATCAGGTGCGTGATGAAGGCTTCCGGGACTGGCTCCGTCAGATCAGTACTCGTG TTCCCAACTGGCCAGACAGTACCGGTACACTGACGACCGATTTCATTATTCGCCCCGGCGTGTACGACATCATTACGACC TACGAAAATCTGGCGCTTCAGGCGTTTCGGCAAGGAGAAGGGCGCGGTTTGCGGTTGCGTGTCTACTACCCGGCGGCAAC GTTACTGAGCGATCATCCCTACGTTGTTCTGAGTGCGCCGTGGGTAGATGGTAACGAGCGCGCAGCAGCAATCCTGCTGC GCGATTTTCTCCGCAGTCCGGCAGAACAGACGATTGCCATGCGTGAATACGGTTTTCGTCCGGTCATTCCCCAGGTGACG ATCAATTTCGACGATACCTCGTCGCTCTTTGGTCGTTACCGCGAACGCGATCTGGGCGTACAGCTCGATATTACCGCTCA GCTTCAGCTTCCTCCACCGGAGGTCGTCGAGGAGCTGATTGCGACATGGCAAGAAGTCAGGAGACCTTAG
Upstream 100 bases:
>100_bases TAGCAGAGAAGTGCTACTATTGTTATCAGAGAAGGTATTGTATTTCGATAGGTTTTGGCAGTACGCTTATCAAATGTCTG CCTGCTTGAAAGAGACGTGC
Downstream 100 bases:
>100_bases AGGTAGCAATACAATCGTGAAAGGATATCGCTCTATGGCAATGCGTCGTCATACGCTTATGACTATACTGTTGCTGTTGA TGTTCACACTGAGCGGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A Domain Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MRSISRTIAGVYLLATALLAITTVIWGPIGWAPLPLPTAAPPIQIDVAMSSEKEAWIRSALERFAQTNPTINGRRIEVRL RVSGSRELIDAIGQGYQPTIISPSSSIQLVELQQQYPDLLRDPASPLALTPIVALMRDAPSTNGITNPWQLWQRQLPDQI NQLKLGISSPVQSNGGLQSLIILAAQYHQTASLTVDQVRDEGFRDWLRQISTRVPNWPDSTGTLTTDFIIRPGVYDIITT YENLALQAFRQGEGRGLRLRVYYPAATLLSDHPYVVLSAPWVDGNERAAAILLRDFLRSPAEQTIAMREYGFRPVIPQVT INFDDTSSLFGRYRERDLGVQLDITAQLQLPPPEVVEELIATWQEVRRP
Sequences:
>Translated_369_residues MRSISRTIAGVYLLATALLAITTVIWGPIGWAPLPLPTAAPPIQIDVAMSSEKEAWIRSALERFAQTNPTINGRRIEVRL RVSGSRELIDAIGQGYQPTIISPSSSIQLVELQQQYPDLLRDPASPLALTPIVALMRDAPSTNGITNPWQLWQRQLPDQI NQLKLGISSPVQSNGGLQSLIILAAQYHQTASLTVDQVRDEGFRDWLRQISTRVPNWPDSTGTLTTDFIIRPGVYDIITT YENLALQAFRQGEGRGLRLRVYYPAATLLSDHPYVVLSAPWVDGNERAAAILLRDFLRSPAEQTIAMREYGFRPVIPQVT INFDDTSSLFGRYRERDLGVQLDITAQLQLPPPEVVEELIATWQEVRRP >Mature_369_residues MRSISRTIAGVYLLATALLAITTVIWGPIGWAPLPLPTAAPPIQIDVAMSSEKEAWIRSALERFAQTNPTINGRRIEVRL RVSGSRELIDAIGQGYQPTIISPSSSIQLVELQQQYPDLLRDPASPLALTPIVALMRDAPSTNGITNPWQLWQRQLPDQI NQLKLGISSPVQSNGGLQSLIILAAQYHQTASLTVDQVRDEGFRDWLRQISTRVPNWPDSTGTLTTDFIIRPGVYDIITT YENLALQAFRQGEGRGLRLRVYYPAATLLSDHPYVVLSAPWVDGNERAAAILLRDFLRSPAEQTIAMREYGFRPVIPQVT INFDDTSSLFGRYRERDLGVQLDITAQLQLPPPEVVEELIATWQEVRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41222; Mature: 41222
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSISRTIAGVYLLATALLAITTVIWGPIGWAPLPLPTAAPPIQIDVAMSSEKEAWIRSA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHH LERFAQTNPTINGRRIEVRLRVSGSRELIDAIGQGYQPTIISPSSSIQLVELQQQYPDLL HHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCEEECCCCCEEEEHHHHHCHHHH RDPASPLALTPIVALMRDAPSTNGITNPWQLWQRQLPDQINQLKLGISSPVQSNGGLQSL HCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHH IILAAQYHQTASLTVDQVRDEGFRDWLRQISTRVPNWPDSTGTLTTDFIIRPGVYDIITT HHHHHHHHCHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHH YENLALQAFRQGEGRGLRLRVYYPAATLLSDHPYVVLSAPWVDGNERAAAILLRDFLRSP HHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCC AEQTIAMREYGFRPVIPQVTINFDDTSSLFGRYRERDLGVQLDITAQLQLPPPEVVEELI HHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHH ATWQEVRRP HHHHHHCCC >Mature Secondary Structure MRSISRTIAGVYLLATALLAITTVIWGPIGWAPLPLPTAAPPIQIDVAMSSEKEAWIRSA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHH LERFAQTNPTINGRRIEVRLRVSGSRELIDAIGQGYQPTIISPSSSIQLVELQQQYPDLL HHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCEEECCCCCEEEEHHHHHCHHHH RDPASPLALTPIVALMRDAPSTNGITNPWQLWQRQLPDQINQLKLGISSPVQSNGGLQSL HCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHHH IILAAQYHQTASLTVDQVRDEGFRDWLRQISTRVPNWPDSTGTLTTDFIIRPGVYDIITT HHHHHHHHCHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHH YENLALQAFRQGEGRGLRLRVYYPAATLLSDHPYVVLSAPWVDGNERAAAILLRDFLRSP HHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCC AEQTIAMREYGFRPVIPQVTINFDDTSSLFGRYRERDLGVQLDITAQLQLPPPEVVEELI HHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHH ATWQEVRRP HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA