| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524627
Identifier: 222524627
GI number: 222524627
Start: 1725270
End: 1726760
Strand: Reverse
Name: 222524627
Synonym: Chy400_1351
Alternate gene names: NA
Gene position: 1726760-1725270 (Counterclockwise)
Preceding gene: 222524636
Following gene: 222524626
Centisome position: 32.77
GC content: 55.47
Gene sequence:
>1491_bases TTGGGTTCCAGATTTGCACAATCATCCCTAATTGATAGTAGCTCATCGCAATTGCGATGGTTAGCTGTCATTGATCGTAT TCGCTGGCTCCTGGTAGGGATAATCGGTCTATGTTTATTCGCTATCCTGTATCAACGCGGTTACGATGATCCGTACATCA CCTACCGCTACGCTCATAATCTGGCTCACGGATTGGGTTTTGTCTATAACCCTGACACACCAACCTTAAGCACAACCGCA CCGTTGTTTGGCCTGATCCTCACCCCGATTGCCATGCTGGGCTGGTCGTTACCACTGGCTGCAAATTTGCTTGGCTGTTT AAGCCATGCTGCCGGCGCACTGGCCCTCTGGCAATTGGGGCGGCAGTGGGGTGATACTATCACCGGTGGTAGTGCGGCAC TTTTGTATCTCCTCTTTCCACTGCCGCTTTCTACCCTGGGGAGTGAAACATTACCGGCAATGGCCCTAACTCTATGGGTG TTTGTCTTTGCTGCACGCGGGCGGCAAGTGCTGACCGGTCTCTTGCTGGGGGTACTGGTCTGGTTGCGCCCGGACGGTAT TTTGGTTGGGCCATTAGCCCTGCTGCTCCTGATGACAATCGATAACAACTGGCGCAACCCGCGGCGTTGGCCGTGGTCGG CAGCGCTAATCTGGATCGGAATCGTGCTCGCCGGTATGGGACTGGCGTGGATTGTGTACGGCAGACCGTTACCGGTTACG CTTTACGCCAAACAACAACAGGCACTGATTCCCGGTTTCTACGATTTTGGTGATCGATTGTGGGTAACGTTGACGGCTCA TCTTGCGCAACCACTGTATCGGATGATCCTCTACCTATCTGTATTGGGTCTGATCGTAAGTATTCGTTCCTGGCGCTGGT TGTTTCTGCCCGGCTGGGCCGCGCTCTATGGTCTGGCGTATACGTGGTTGCACGTCGCCGGGTATTTCTGGTACGTTGCT CCTCTCGTGATCGGTCTTGCCCCTCTCTTCGGGCTTGGTGTACGTTTTTGTAGTGATTGGTTGCGGCGAGTTGGCGGTAT GCGCTTCATGGTGATCGGCGTTGTTGTATTGGTAGGTGGCACAACGCTCTGGCTGGGTAGTTCTGTCTATCGATTGGGTC AACAGATCGATCAGCGACTAACCGTCTATCGTGCCGCCGGTGAGTGGCTGGCAGCCAATACCTCGCCAACTGACAGTGTG GCGACGCTGGAGATTGGTATTATCGGCTATTATGCCCAACGACCAATGGTCGATTTTGCCGGCCTCTTGCAGCCCGATAT TGCGGCCCGGTTGGGACCGGGTGGGTTTGGCGAGGCTGCTCTGTATGCTATCGATCAGTACCGGCCCGCGTATCTGGTGT TGCAAGAGCAGGCGCTCCCATTACTGTCCGGTCGGCCTGATCTTGCGGAGCGCTGTCCGGTCGTCGCCGAGATACCCGAT CCGCGCTACCCGGCTCCTCTGACCATCCACGCCTGTCGCTGGGATGAGTAA
Upstream 100 bases:
>100_bases CTCCACTCTGCACGGGTAATTTACTAACCGACTATAATGCAGGTATGACACCCCTATTGTAGCGCTGCTTTGTAATGAAT AGATAAATAAAGAGGTCTCA
Downstream 100 bases:
>100_bases GGGAGCAGGTAGTATTCGGGCGGAGGGTGAGGATTGCTACATATGAGGTAATGCCGTTTGCAACCCGCTTGAGCACCGGG TTCGGGATGGTTTTCATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MGSRFAQSSLIDSSSSQLRWLAVIDRIRWLLVGIIGLCLFAILYQRGYDDPYITYRYAHNLAHGLGFVYNPDTPTLSTTA PLFGLILTPIAMLGWSLPLAANLLGCLSHAAGALALWQLGRQWGDTITGGSAALLYLLFPLPLSTLGSETLPAMALTLWV FVFAARGRQVLTGLLLGVLVWLRPDGILVGPLALLLLMTIDNNWRNPRRWPWSAALIWIGIVLAGMGLAWIVYGRPLPVT LYAKQQQALIPGFYDFGDRLWVTLTAHLAQPLYRMILYLSVLGLIVSIRSWRWLFLPGWAALYGLAYTWLHVAGYFWYVA PLVIGLAPLFGLGVRFCSDWLRRVGGMRFMVIGVVVLVGGTTLWLGSSVYRLGQQIDQRLTVYRAAGEWLAANTSPTDSV ATLEIGIIGYYAQRPMVDFAGLLQPDIAARLGPGGFGEAALYAIDQYRPAYLVLQEQALPLLSGRPDLAERCPVVAEIPD PRYPAPLTIHACRWDE
Sequences:
>Translated_496_residues MGSRFAQSSLIDSSSSQLRWLAVIDRIRWLLVGIIGLCLFAILYQRGYDDPYITYRYAHNLAHGLGFVYNPDTPTLSTTA PLFGLILTPIAMLGWSLPLAANLLGCLSHAAGALALWQLGRQWGDTITGGSAALLYLLFPLPLSTLGSETLPAMALTLWV FVFAARGRQVLTGLLLGVLVWLRPDGILVGPLALLLLMTIDNNWRNPRRWPWSAALIWIGIVLAGMGLAWIVYGRPLPVT LYAKQQQALIPGFYDFGDRLWVTLTAHLAQPLYRMILYLSVLGLIVSIRSWRWLFLPGWAALYGLAYTWLHVAGYFWYVA PLVIGLAPLFGLGVRFCSDWLRRVGGMRFMVIGVVVLVGGTTLWLGSSVYRLGQQIDQRLTVYRAAGEWLAANTSPTDSV ATLEIGIIGYYAQRPMVDFAGLLQPDIAARLGPGGFGEAALYAIDQYRPAYLVLQEQALPLLSGRPDLAERCPVVAEIPD PRYPAPLTIHACRWDE >Mature_495_residues GSRFAQSSLIDSSSSQLRWLAVIDRIRWLLVGIIGLCLFAILYQRGYDDPYITYRYAHNLAHGLGFVYNPDTPTLSTTAP LFGLILTPIAMLGWSLPLAANLLGCLSHAAGALALWQLGRQWGDTITGGSAALLYLLFPLPLSTLGSETLPAMALTLWVF VFAARGRQVLTGLLLGVLVWLRPDGILVGPLALLLLMTIDNNWRNPRRWPWSAALIWIGIVLAGMGLAWIVYGRPLPVTL YAKQQQALIPGFYDFGDRLWVTLTAHLAQPLYRMILYLSVLGLIVSIRSWRWLFLPGWAALYGLAYTWLHVAGYFWYVAP LVIGLAPLFGLGVRFCSDWLRRVGGMRFMVIGVVVLVGGTTLWLGSSVYRLGQQIDQRLTVYRAAGEWLAANTSPTDSVA TLEIGIIGYYAQRPMVDFAGLLQPDIAARLGPGGFGEAALYAIDQYRPAYLVLQEQALPLLSGRPDLAERCPVVAEIPDP RYPAPLTIHACRWDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54797; Mature: 54666
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRFAQSSLIDSSSSQLRWLAVIDRIRWLLVGIIGLCLFAILYQRGYDDPYITYRYAHN CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH LAHGLGFVYNPDTPTLSTTAPLFGLILTPIAMLGWSLPLAANLLGCLSHAAGALALWQLG HHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RQWGDTITGGSAALLYLLFPLPLSTLGSETLPAMALTLWVFVFAARGRQVLTGLLLGVLV HHHCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH WLRPDGILVGPLALLLLMTIDNNWRNPRRWPWSAALIWIGIVLAGMGLAWIVYGRPLPVT HHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEE LYAKQQQALIPGFYDFGDRLWVTLTAHLAQPLYRMILYLSVLGLIVSIRSWRWLFLPGWA EEECCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHH ALYGLAYTWLHVAGYFWYVAPLVIGLAPLFGLGVRFCSDWLRRVGGMRFMVIGVVVLVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC TTLWLGSSVYRLGQQIDQRLTVYRAAGEWLAANTSPTDSVATLEIGIIGYYAQRPMVDFA CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEEEEHHHCCCHHHHH GLLQPDIAARLGPGGFGEAALYAIDQYRPAYLVLQEQALPLLSGRPDLAERCPVVAEIPD HHCCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHCCCCCHHHHCCEEEECCC PRYPAPLTIHACRWDE CCCCCCEEEEECCCCC >Mature Secondary Structure GSRFAQSSLIDSSSSQLRWLAVIDRIRWLLVGIIGLCLFAILYQRGYDDPYITYRYAHN CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH LAHGLGFVYNPDTPTLSTTAPLFGLILTPIAMLGWSLPLAANLLGCLSHAAGALALWQLG HHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RQWGDTITGGSAALLYLLFPLPLSTLGSETLPAMALTLWVFVFAARGRQVLTGLLLGVLV HHHCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH WLRPDGILVGPLALLLLMTIDNNWRNPRRWPWSAALIWIGIVLAGMGLAWIVYGRPLPVT HHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCEE LYAKQQQALIPGFYDFGDRLWVTLTAHLAQPLYRMILYLSVLGLIVSIRSWRWLFLPGWA EEECCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHH ALYGLAYTWLHVAGYFWYVAPLVIGLAPLFGLGVRFCSDWLRRVGGMRFMVIGVVVLVGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC TTLWLGSSVYRLGQQIDQRLTVYRAAGEWLAANTSPTDSVATLEIGIIGYYAQRPMVDFA CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEEEEHHHCCCHHHHH GLLQPDIAARLGPGGFGEAALYAIDQYRPAYLVLQEQALPLLSGRPDLAERCPVVAEIPD HHCCCHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHCCCCCHHHHCCEEEECCC PRYPAPLTIHACRWDE CCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA