| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524590
Identifier: 222524590
GI number: 222524590
Start: 1680466
End: 1681521
Strand: Reverse
Name: 222524590
Synonym: Chy400_1314
Alternate gene names: NA
Gene position: 1681521-1680466 (Counterclockwise)
Preceding gene: 222524591
Following gene: 222524589
Centisome position: 31.91
GC content: 62.59
Gene sequence:
>1056_bases ATGCGTCGGGCTATCTCATGTGTTCTTGCCCTCTTTGTGAGCATATTTTTATGGCAACCGGTGGCTGCTCAGGCCGACGT GGTGGCGGCAGCGTTGCGATGGGTACAGGCACAGCAGCAGGCTGATGGTAGCTTTGCCGGTTTTGGCCCTGGTGATACGG CTGATGCGATTGTGGCGCTGGTTGCCGGCGGTGAGCAACCACCGGCCAATGCAATGACGTATCTGGCCGGTCAGGCCGCT TCCTACGGTACCTCTTCGGCAGGTGCGACGGCGAAATTGATTCTGGCCGCGGTTGCCGCCGGACGCGATCCGCTCAATGT TGGCGGGGTCAATCTGGCCCGTCAGTTGGGGACAACCTACGATCCGGCGACCGGTCAGTACGGCGCCGATGTGTACGGTC ACGCGCTGGCGCTGCTGGCGATCAAGGCGATGGGTGTGCAACCGCCAGCCGCAGCCATTGACCGTCTGATCGCTTTGCAG TTGCGCGATGGCGGCTGGAGCTTCGATGGTGCTGCCGCAACCGGCAGTGATACCAATACCACCAGTCTGGCCGTTATGGC GCTGGCCGGTTATGCCCGTGCCGCCGATGCCTTGAGCGCAGCCCGCACCTACCTGCGCGGCCAGCAGAACCCTGATGGCG GCTTTCCCTACTCGCAAACATCGGCCTTTGGCAATGCCAGTGATGCCAACTCGACCGCAGCCGTCGTTCAGGCGATTCTG GCCCTTGGCGAAGACCCCAACGCTGCACCCTGGCGGCAGGGTGATGCCACACCGCTGAAGGCGCTGGTTGCGTTCCAGAA TCAGAGTGGGGCGTTCCGCTATCAAGATGCGATGCCTGACGATAACGCATTGGCTACCTATCAGGCCATACCCGCGATTG CCGGGAAGACCTTGCCGGTGGTCAGCACGACGATTCCGGCTGCTCAGTCACTCATCGCGCCGGCCCCCAACCTTCCGACG ACCGGTGGTGAAGAGGTGCTGGTCTGGCCTGTGGTGTTGATGGGCGTCACACTGCTCGCGTTGGGTGTCTGGCTCCGTCG TCGCCAGGCGCTATAG
Upstream 100 bases:
>100_bases ATGCATTCTTGCCTTCGTCTGTTCACCCCTCCACTATCGGTGGGGGGATTTTTATTGCCCGGTGGGTGTTCGCTGAATGG GAAGAAAGGAATCTGGTACC
Downstream 100 bases:
>100_bases GGATGTCGTTATGCGATCCGCACGCACGCTGCTGCTCTTGCTGGCTATGATCCTGCTTTCCGGCGTGGTCTCAGCACAGT CGCCGCTTAATCGCGCCGGG
Product: LPXTG-motif cell wall anchor domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MRRAISCVLALFVSIFLWQPVAAQADVVAAALRWVQAQQQADGSFAGFGPGDTADAIVALVAGGEQPPANAMTYLAGQAA SYGTSSAGATAKLILAAVAAGRDPLNVGGVNLARQLGTTYDPATGQYGADVYGHALALLAIKAMGVQPPAAAIDRLIALQ LRDGGWSFDGAAATGSDTNTTSLAVMALAGYARAADALSAARTYLRGQQNPDGGFPYSQTSAFGNASDANSTAAVVQAIL ALGEDPNAAPWRQGDATPLKALVAFQNQSGAFRYQDAMPDDNALATYQAIPAIAGKTLPVVSTTIPAAQSLIAPAPNLPT TGGEEVLVWPVVLMGVTLLALGVWLRRRQAL
Sequences:
>Translated_351_residues MRRAISCVLALFVSIFLWQPVAAQADVVAAALRWVQAQQQADGSFAGFGPGDTADAIVALVAGGEQPPANAMTYLAGQAA SYGTSSAGATAKLILAAVAAGRDPLNVGGVNLARQLGTTYDPATGQYGADVYGHALALLAIKAMGVQPPAAAIDRLIALQ LRDGGWSFDGAAATGSDTNTTSLAVMALAGYARAADALSAARTYLRGQQNPDGGFPYSQTSAFGNASDANSTAAVVQAIL ALGEDPNAAPWRQGDATPLKALVAFQNQSGAFRYQDAMPDDNALATYQAIPAIAGKTLPVVSTTIPAAQSLIAPAPNLPT TGGEEVLVWPVVLMGVTLLALGVWLRRRQAL >Mature_351_residues MRRAISCVLALFVSIFLWQPVAAQADVVAAALRWVQAQQQADGSFAGFGPGDTADAIVALVAGGEQPPANAMTYLAGQAA SYGTSSAGATAKLILAAVAAGRDPLNVGGVNLARQLGTTYDPATGQYGADVYGHALALLAIKAMGVQPPAAAIDRLIALQ LRDGGWSFDGAAATGSDTNTTSLAVMALAGYARAADALSAARTYLRGQQNPDGGFPYSQTSAFGNASDANSTAAVVQAIL ALGEDPNAAPWRQGDATPLKALVAFQNQSGAFRYQDAMPDDNALATYQAIPAIAGKTLPVVSTTIPAAQSLIAPAPNLPT TGGEEVLVWPVVLMGVTLLALGVWLRRRQAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35805; Mature: 35805
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAISCVLALFVSIFLWQPVAAQADVVAAALRWVQAQQQADGSFAGFGPGDTADAIVAL CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VAGGEQPPANAMTYLAGQAASYGTSSAGATAKLILAAVAAGRDPLNVGGVNLARQLGTTY HHCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC DPATGQYGADVYGHALALLAIKAMGVQPPAAAIDRLIALQLRDGGWSFDGAAATGSDTNT CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCH TSLAVMALAGYARAADALSAARTYLRGQQNPDGGFPYSQTSAFGNASDANSTAAVVQAIL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHH ALGEDPNAAPWRQGDATPLKALVAFQNQSGAFRYQDAMPDDNALATYQAIPAIAGKTLPV HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCH VSTTIPAAQSLIAPAPNLPTTGGEEVLVWPVVLMGVTLLALGVWLRRRQAL HHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRAISCVLALFVSIFLWQPVAAQADVVAAALRWVQAQQQADGSFAGFGPGDTADAIVAL CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VAGGEQPPANAMTYLAGQAASYGTSSAGATAKLILAAVAAGRDPLNVGGVNLARQLGTTY HHCCCCCCHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC DPATGQYGADVYGHALALLAIKAMGVQPPAAAIDRLIALQLRDGGWSFDGAAATGSDTNT CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCH TSLAVMALAGYARAADALSAARTYLRGQQNPDGGFPYSQTSAFGNASDANSTAAVVQAIL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHH ALGEDPNAAPWRQGDATPLKALVAFQNQSGAFRYQDAMPDDNALATYQAIPAIAGKTLPV HHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCH VSTTIPAAQSLIAPAPNLPTTGGEEVLVWPVVLMGVTLLALGVWLRRRQAL HHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA