| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524586
Identifier: 222524586
GI number: 222524586
Start: 1677070
End: 1678203
Strand: Reverse
Name: 222524586
Synonym: Chy400_1310
Alternate gene names: NA
Gene position: 1678203-1677070 (Counterclockwise)
Preceding gene: 222524587
Following gene: 222524585
Centisome position: 31.85
GC content: 62.52
Gene sequence:
>1134_bases ATGCACACACGCACATGGCTCTGCTGGCTGATTGCCACTACCACCATCGCCATCCTGGCCCCGCACCCACTCTATCACAT CCTGCTCATGCTGGTCGTGACGCAGGTTTTTGTCAGGCATCGTGATGATCGGCCACTGGCCCGCAGTTTTAGTCTGTTTG CCCGTGTCGGTGCTTTGATCTGGTTTGGCTACGTCGTCTTCTCCGTCGTGACGGTTGGAGGTGTGCGCGGGGCGACGGTG CTGCTCCATCTTCCTGCTATTCACCTGCCGGTCTGGCTCGGTGGGATTGTGTTGGGTGGCCCGATCACTGCTGAAGCGCT GGCCTGGGGCGCGACTCGTGGATTGGGTCTGTGGACGCTTTTGATCATCTTTGGTGCGTTCAATGCGCTGGTTGATCATC ATCGGCTACTCCGTCTGACGCCGCGTTCGCTGTTTCACGCCGGGCTGGCGGTGACGATTGCGCTTTCCTTTGCCCCCTCG CTGGTACACGCTATTCAGGACATCACGGCTGCGCAGCGTGCGCGTGGTCATCGCTTCGGCAGTGTCCGAAGCTGGTGGGC ACTGATTGGCCCGCTACTGGCCGGTAGCCTGGAACGGTCGCTGCAACTGGCGGAAGCGCTGGAGGCGCGGGGCTACGGGC GCACGCTGTCAGCGGCCCACAACCCAACCCGTGTCTTTGCGCTGATTGCCGGTCTGCTGAGTATGACAACCGCTCTGATC GGCTGGCTATGGGTGGGGCCGGTAAGCTGGCCGTTCGCGCTGCCGGTCGGTGGTGGTGGCCTCGTCCTTACCGCCTGGGC AGCTTACGATCTGAGTCGTTGTGTGCCACGCACGACTTATCGGCGCGAACGCTGGCGGCGACTTGACACGCTCACCTGGA TTGCTGCGGCGGCTGCCGTCACCGTTGTCGCGACGATCCACCTGATCGATCCGACGATCCTGGTCTACTATCCCTTCCCG GTCATCACCGAACCCGGTTTTGATCTGCGAGTTGGAGCGGCGATTCTGTTGCTTGCCGTGCCTGCGCTACCGCTGACCGC CGGCGTACCCCGCCGGGCCTATCGTGTACGCGCCGACCGTCGCGCTGCCCGCCAGGAGACAGTGTCACAGCATGTGTTGA GTGCCCAATCTTGA
Upstream 100 bases:
>100_bases GCGATCTGGGCGGATTGACCGGCGATACCTACGGTGCCCTCTGTGAGATTGGTGAGGTCGTCGCGTTAGCCGCGCTTACC GTGCGGTGGGGGGGAATGTG
Downstream 100 bases:
>100_bases CTCCTGATGCTCTTCGCGCTACCATGTCAGTCGGCGTCAATCGCAAAGCGCTGACGAGGACGAGTAGCCCGATTCCGGCC ACAGGGAGGGCGTGTCGCGA
Product: cobalt transport protein
Products: NA
Alternate protein names: ABC Transporter-Associated Permease; Cobalt Transporter; Permease Component Of ABC-Type Cobalt Transport System
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MHTRTWLCWLIATTTIAILAPHPLYHILLMLVVTQVFVRHRDDRPLARSFSLFARVGALIWFGYVVFSVVTVGGVRGATV LLHLPAIHLPVWLGGIVLGGPITAEALAWGATRGLGLWTLLIIFGAFNALVDHHRLLRLTPRSLFHAGLAVTIALSFAPS LVHAIQDITAAQRARGHRFGSVRSWWALIGPLLAGSLERSLQLAEALEARGYGRTLSAAHNPTRVFALIAGLLSMTTALI GWLWVGPVSWPFALPVGGGGLVLTAWAAYDLSRCVPRTTYRRERWRRLDTLTWIAAAAAVTVVATIHLIDPTILVYYPFP VITEPGFDLRVGAAILLLAVPALPLTAGVPRRAYRVRADRRAARQETVSQHVLSAQS
Sequences:
>Translated_377_residues MHTRTWLCWLIATTTIAILAPHPLYHILLMLVVTQVFVRHRDDRPLARSFSLFARVGALIWFGYVVFSVVTVGGVRGATV LLHLPAIHLPVWLGGIVLGGPITAEALAWGATRGLGLWTLLIIFGAFNALVDHHRLLRLTPRSLFHAGLAVTIALSFAPS LVHAIQDITAAQRARGHRFGSVRSWWALIGPLLAGSLERSLQLAEALEARGYGRTLSAAHNPTRVFALIAGLLSMTTALI GWLWVGPVSWPFALPVGGGGLVLTAWAAYDLSRCVPRTTYRRERWRRLDTLTWIAAAAAVTVVATIHLIDPTILVYYPFP VITEPGFDLRVGAAILLLAVPALPLTAGVPRRAYRVRADRRAARQETVSQHVLSAQS >Mature_377_residues MHTRTWLCWLIATTTIAILAPHPLYHILLMLVVTQVFVRHRDDRPLARSFSLFARVGALIWFGYVVFSVVTVGGVRGATV LLHLPAIHLPVWLGGIVLGGPITAEALAWGATRGLGLWTLLIIFGAFNALVDHHRLLRLTPRSLFHAGLAVTIALSFAPS LVHAIQDITAAQRARGHRFGSVRSWWALIGPLLAGSLERSLQLAEALEARGYGRTLSAAHNPTRVFALIAGLLSMTTALI GWLWVGPVSWPFALPVGGGGLVLTAWAAYDLSRCVPRTTYRRERWRRLDTLTWIAAAAAVTVVATIHLIDPTILVYYPFP VITEPGFDLRVGAAILLLAVPALPLTAGVPRRAYRVRADRRAARQETVSQHVLSAQS
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41155; Mature: 41155
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTRTWLCWLIATTTIAILAPHPLYHILLMLVVTQVFVRHRDDRPLARSFSLFARVGALI CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WFGYVVFSVVTVGGVRGATVLLHLPAIHLPVWLGGIVLGGPITAEALAWGATRGLGLWTL HHHHHHHHHHHHCCCCHHEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH LIIFGAFNALVDHHRLLRLTPRSLFHAGLAVTIALSFAPSLVHAIQDITAAQRARGHRFG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SVRSWWALIGPLLAGSLERSLQLAEALEARGYGRTLSAAHNPTRVFALIAGLLSMTTALI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH GWLWVGPVSWPFALPVGGGGLVLTAWAAYDLSRCVPRTTYRRERWRRLDTLTWIAAAAAV HHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TVVATIHLIDPTILVYYPFPVITEPGFDLRVGAAILLLAVPALPLTAGVPRRAYRVRADR HHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH RAARQETVSQHVLSAQS HHHHHHHHHHHHHHCCC >Mature Secondary Structure MHTRTWLCWLIATTTIAILAPHPLYHILLMLVVTQVFVRHRDDRPLARSFSLFARVGALI CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WFGYVVFSVVTVGGVRGATVLLHLPAIHLPVWLGGIVLGGPITAEALAWGATRGLGLWTL HHHHHHHHHHHHCCCCHHEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH LIIFGAFNALVDHHRLLRLTPRSLFHAGLAVTIALSFAPSLVHAIQDITAAQRARGHRFG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SVRSWWALIGPLLAGSLERSLQLAEALEARGYGRTLSAAHNPTRVFALIAGLLSMTTALI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH GWLWVGPVSWPFALPVGGGGLVLTAWAAYDLSRCVPRTTYRRERWRRLDTLTWIAAAAAV HHHHHCCCCCCEEEECCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TVVATIHLIDPTILVYYPFPVITEPGFDLRVGAAILLLAVPALPLTAGVPRRAYRVRADR HHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH RAARQETVSQHVLSAQS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA