| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524561
Identifier: 222524561
GI number: 222524561
Start: 1647942
End: 1649162
Strand: Reverse
Name: 222524561
Synonym: Chy400_1285
Alternate gene names: NA
Gene position: 1649162-1647942 (Counterclockwise)
Preceding gene: 222524562
Following gene: 222524553
Centisome position: 31.3
GC content: 58.15
Gene sequence:
>1221_bases ATGCGTCGTGTCCTGATCCTCTGGTTTGCCATCTGGTCACTCTTCTCCGCTTCGGCGGTGGCTGCGCAGCCGTTGCTCAC GGTCACACTCGATTTTGAAGGATTTGCCGATAATCTGGATATTACCGGCTATGGTGGGCTACAATTTGGCACCGGCTGGC GCTTCGGCGATGTGCGCAGTGGACGCTACAATGCCCCGTTTCCTCAACTCTGCCCTGACTTTGGCGGCACGTGCGCTTTC TGGCTGAACGGTAACGGTTTCGGGCGCGTCAGCGGGAGTGGTAACGGTAGGATTACCTTGCCGGCCAATGTGATTGCATT CAGTGTTGGTGTCTCCACTTCCGAGACGCTTGGTATCACGGCCTTTGCTGCCGATGGGTCTGTCCTGGCAACAACCGAGG TGCTGGCAAATATCTTGACCGGTCGCCTTGATCGAGCTACGCTGACCGCACCCCCAGGGCAGGTGATTAGCTCCATCGAA CTGAATGGTGTACGCGATACCTGGTTGATTGACGATATTGAGTATGTGATCAATCCTGCCTTGGGAGCGCGGTCGGCCCG TCTGGTGCTGGCTCAGCGGGTTGATGATGTGGTGAAACCGGGTGAGATGTTGAGCCTGGATCTGGTGCTGGAAAATTACG GTCAGGGGCCGGCCCTTGCGACCACGATTGAGTTGCCGTTTGCCGATGACGCCTTGATCCTGCTTGACGCCAAAACGAGT CGCCCTGATGTGTGGGTCAGCGATGTTCAGCCGGGACGCATCACGATACGTACGGGGATACTGGCTGCCGGGCGTGATCT GATTACAATAACAATCCGTTTCCGGGTGCGCGAAGATGCCCCGTTGGGTACCGCCATTGGTCGCATTGCCCGACTCAGTT TCCGCGATGCGGTCAGCGAATTTGGCCGCGGTCAAAGCAATCTGCCTGCAACGGTGATTGGCGACGGCCCGGAACGCACG TTTTGGCGGACACCGAATCTTACCATTACCGGACAAACACTGTCCTACACGGCTGCCGGCTTTGCCCCCGGCGAACCGGT TGGTATCTGGTATAACCCACCCGCCGGTGCGCCGCCGGTCACCGTGGCCACCGTGCGCGCCGATGGTGATGGCCGCGTAA GTGGCTTCCTGGCACTGACAGACTTACCACCCGGTGATTATTCGCTGGTATTGTTCAGCCACCACTCACAGCAGACGTTT GTTGGTGGGTTTGGACGGTAA
Upstream 100 bases:
>100_bases AAACCGTTATTGTTGATGTTGCCAACCTGACAAATTTGCCATTCCCCTTTCCCAACTTCTCCCATATAATAACGGCTACC ACCGTCGTAAGGAGGTGCAT
Downstream 100 bases:
>100_bases TGGTTGCCGGGCCGGTCATTCCGGCGCTCAATCTGTCAGTCGGCATCAGCCAGGCTGTCAGTTGGTGAGAGAGCTGGGAA GCGGGGCAATTATGAATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRRVLILWFAIWSLFSASAVAAQPLLTVTLDFEGFADNLDITGYGGLQFGTGWRFGDVRSGRYNAPFPQLCPDFGGTCAF WLNGNGFGRVSGSGNGRITLPANVIAFSVGVSTSETLGITAFAADGSVLATTEVLANILTGRLDRATLTAPPGQVISSIE LNGVRDTWLIDDIEYVINPALGARSARLVLAQRVDDVVKPGEMLSLDLVLENYGQGPALATTIELPFADDALILLDAKTS RPDVWVSDVQPGRITIRTGILAAGRDLITITIRFRVREDAPLGTAIGRIARLSFRDAVSEFGRGQSNLPATVIGDGPERT FWRTPNLTITGQTLSYTAAGFAPGEPVGIWYNPPAGAPPVTVATVRADGDGRVSGFLALTDLPPGDYSLVLFSHHSQQTF VGGFGR
Sequences:
>Translated_406_residues MRRVLILWFAIWSLFSASAVAAQPLLTVTLDFEGFADNLDITGYGGLQFGTGWRFGDVRSGRYNAPFPQLCPDFGGTCAF WLNGNGFGRVSGSGNGRITLPANVIAFSVGVSTSETLGITAFAADGSVLATTEVLANILTGRLDRATLTAPPGQVISSIE LNGVRDTWLIDDIEYVINPALGARSARLVLAQRVDDVVKPGEMLSLDLVLENYGQGPALATTIELPFADDALILLDAKTS RPDVWVSDVQPGRITIRTGILAAGRDLITITIRFRVREDAPLGTAIGRIARLSFRDAVSEFGRGQSNLPATVIGDGPERT FWRTPNLTITGQTLSYTAAGFAPGEPVGIWYNPPAGAPPVTVATVRADGDGRVSGFLALTDLPPGDYSLVLFSHHSQQTF VGGFGR >Mature_406_residues MRRVLILWFAIWSLFSASAVAAQPLLTVTLDFEGFADNLDITGYGGLQFGTGWRFGDVRSGRYNAPFPQLCPDFGGTCAF WLNGNGFGRVSGSGNGRITLPANVIAFSVGVSTSETLGITAFAADGSVLATTEVLANILTGRLDRATLTAPPGQVISSIE LNGVRDTWLIDDIEYVINPALGARSARLVLAQRVDDVVKPGEMLSLDLVLENYGQGPALATTIELPFADDALILLDAKTS RPDVWVSDVQPGRITIRTGILAAGRDLITITIRFRVREDAPLGTAIGRIARLSFRDAVSEFGRGQSNLPATVIGDGPERT FWRTPNLTITGQTLSYTAAGFAPGEPVGIWYNPPAGAPPVTVATVRADGDGRVSGFLALTDLPPGDYSLVLFSHHSQQTF VGGFGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43170; Mature: 43170
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLILWFAIWSLFSASAVAAQPLLTVTLDFEGFADNLDITGYGGLQFGTGWRFGDVRS CCEEEEEHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCEEEEEECCCEECCCCCCCCCCC GRYNAPFPQLCPDFGGTCAFWLNGNGFGRVSGSGNGRITLPANVIAFSVGVSTSETLGIT CCCCCCCHHHCCCCCCEEEEEECCCCEEEECCCCCCEEEECCEEEEEEECCCCCCCEEEE AFAADGSVLATTEVLANILTGRLDRATLTAPPGQVISSIELNGVRDTWLIDDIEYVINPA EEECCCCEEEHHHHHHHHHHCCCCCEEEECCCHHHEEEEEECCCCCEEEECCHHHHHCCC LGARSARLVLAQRVDDVVKPGEMLSLDLVLENYGQGPALATTIELPFADDALILLDAKTS CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCC RPDVWVSDVQPGRITIRTGILAAGRDLITITIRFRVREDAPLGTAIGRIARLSFRDAVSE CCCEEEECCCCCEEEEEECEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH FGRGQSNLPATVIGDGPERTFWRTPNLTITGQTLSYTAAGFAPGEPVGIWYNPPAGAPPV HCCCCCCCCEEEECCCCCCCEEECCCEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCE TVATVRADGDGRVSGFLALTDLPPGDYSLVLFSHHSQQTFVGGFGR EEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCC >Mature Secondary Structure MRRVLILWFAIWSLFSASAVAAQPLLTVTLDFEGFADNLDITGYGGLQFGTGWRFGDVRS CCEEEEEHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCEEEEEECCCEECCCCCCCCCCC GRYNAPFPQLCPDFGGTCAFWLNGNGFGRVSGSGNGRITLPANVIAFSVGVSTSETLGIT CCCCCCCHHHCCCCCCEEEEEECCCCEEEECCCCCCEEEECCEEEEEEECCCCCCCEEEE AFAADGSVLATTEVLANILTGRLDRATLTAPPGQVISSIELNGVRDTWLIDDIEYVINPA EEECCCCEEEHHHHHHHHHHCCCCCEEEECCCHHHEEEEEECCCCCEEEECCHHHHHCCC LGARSARLVLAQRVDDVVKPGEMLSLDLVLENYGQGPALATTIELPFADDALILLDAKTS CCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCC RPDVWVSDVQPGRITIRTGILAAGRDLITITIRFRVREDAPLGTAIGRIARLSFRDAVSE CCCEEEECCCCCEEEEEECEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH FGRGQSNLPATVIGDGPERTFWRTPNLTITGQTLSYTAAGFAPGEPVGIWYNPPAGAPPV HCCCCCCCCEEEECCCCCCCEEECCCEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCE TVATVRADGDGRVSGFLALTDLPPGDYSLVLFSHHSQQTFVGGFGR EEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA