| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mutL [H]
Identifier: 222524517
GI number: 222524517
Start: 1577326
End: 1579200
Strand: Direct
Name: mutL [H]
Synonym: Chy400_1241
Alternate gene names: 222524517
Gene position: 1577326-1579200 (Clockwise)
Preceding gene: 222524516
Following gene: 222524519
Centisome position: 29.94
GC content: 58.93
Gene sequence:
>1875_bases ATGCCCATTCGTCTCCTCGATGAAACCATTGCCGCGCAAATCGCTGCCGGCGAAGTAGTTGAACGACCGGCGTCAGTCGT CAAAGAGTTGCTCGAAAATGCCATCGACGCCGGTGCGCAACGGATCGTGATCGAGGTACGGGGTGGCGGATTGCGCGAGA TTCGCGTGCAAGACGATGGCTGTGGTATTCCGGCTGACGAAATTGAACTGGCCTTTGCCCGCCACGCAACCAGCAAATTG CAATCTGCTGACGATTTGTGGGCTATTCGGACACTGGGGTTCCGCGGCGAAGCCCTGCCCAGCATCGCCAGCGTTGCTCA GGTCATCTGTATCTCGCGGGTTGCCGATGCTGAACTCGGTGTTGAGTTGCGGATTGCCGGTGGTGAAGTTCAATCCCGAT TGCCGTGCGGTTGTCCGGTTGGTACGACGATCACGGTACGCAACCTCTTTTACAACACGCCAGTCCGGCGGGAATACCTC CGTTCTGAAGCGACGGAAACCGGAGCCATCAGCGCAATTGTCCAACAATACGCACTGGCTTACCCGGAAGTGAGCTTTAG TTTGTTGATCGATGGCCGTATGGCCTTACAGACCAGTGGTGATGGCGATCTCCGGACGGTGGTCGTCGAGCTGTACGGCC TCGAAGTTGGGCGAGCACTATTGCCGGTACAGGCAGAAGCTGGCGTAGACGAAACATGGGTCGCGGTCAATGGTCTGATT TCGCCACCTGAATTAACGCGCAGTTCACGGAATTATCTTTCGCTCTTTGCCAACCGCCGTGCGCTGCAACCGCGGGGGGC ACTGGCTGCGGTGGTCGAGAATGCGTACCATACGATGCTGATGAAGGGACGGTTTCCGATTGCCATCCTCGATGTGCGCG TCCATCCAGCCGCCATCGATGTCAATGTCCATCCTACCAAGAGTGAAGTGAAGTTTCGCTACGCTGCTCACGTTCACAGT GTCCTAGGACGTGCCATTCGTGACGCTTTGCTGCGCGGCGCCGATATTCCAACCTGGGATGCCCCTGATCCGGCAACGGC CCAGCGACGCTTTGAGTTACGTCGGCTGGGTCAGGTAGCAACCACACCCTCCTCTGGCTGGAGTGTTGGAGCCTCGGCGT GGGATCGTGAACGCTCGCGCTGGGATGTCGGTTCGCCGGCAACTGCGCTGAACACGCCCCTTCCCATTGTGCCCGAAGCA CCACAGTCACCGCCATCGCCAACGCTTGTGCCCGAACCTGCCCGGCAAACCCCAGGCGAGCCGATAACTCCAGCAGTTCC GGCAGCGGCACCCTCGGCACTACCCCCGTTACGGGTAGTTGGGCAGGTCGGCCTGACCTACATCGTGGCTGAAGCTCCCG AAGGGATGTATCTGATCGACCAGCACGCAGCCCACGAACGCATCACCTACGAGAAATTGATGAATCAGTATGCCCAACAC GCGGTTGAGTCGCAGCAGTTGTTGATTCCACAGGCGGTTGAGGTTAGCCCGGAAGCAAGTGCCTTGTTGTTGGGTAATGC AGAGCGGCTGGCAGAATGGGGCTTTGTCCTCGAACCGTGGGGCACCGGTGTGCTGGTTCGCGCCATCCCGGCCACCTTAC CGACCGATGAACTGACGCAAGCTATCCACGAGATAGCCGAAAAGCTGGCCGGACGTGGGGGCAGTGATCCGCTGGAATGG CGTGAAGCGATGTTGATTACGCTGGCCTGTCACACCTCAGTCCGCGCCGGACAGCCACTTTCCCACGAAGAGATGCGGCA ATTGTTGCGACAACTTGAACAGTGTGTCAGTCCGCGTACCTGCCCCCACGGTCGTCCGACGATGATCTTGATGACACCGG CTCAGCTCGAACGCCAGTTTGGGCGACGGGTATAG
Upstream 100 bases:
>100_bases AATAGCGTTGAACATTTGTTTGTATTATTGGCCTGGCACTCAGTAACGACTCTTCATCAGACACCAGTAGAACTTCGGGA ATACAGCTCAATGGTGTAAT
Downstream 100 bases:
>100_bases CCCGGCCTGAAGGCACAACGCCGCAACGGAGCAGTCTCTGCCGGCAGGCAGTGAGCTGCATTTGGGGCTGTATAGTGGTT GGCTCCATGCCAGAGACGTT
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MPIRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCGIPADEIELAFARHATSKL QSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAELGVELRIAGGEVQSRLPCGCPVGTTITVRNLFYNTPVRREYL RSEATETGAISAIVQQYALAYPEVSFSLLIDGRMALQTSGDGDLRTVVVELYGLEVGRALLPVQAEAGVDETWVAVNGLI SPPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDVRVHPAAIDVNVHPTKSEVKFRYAAHVHS VLGRAIRDALLRGADIPTWDAPDPATAQRRFELRRLGQVATTPSSGWSVGASAWDRERSRWDVGSPATALNTPLPIVPEA PQSPPSPTLVPEPARQTPGEPITPAVPAAAPSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQH AVESQQLLIPQAVEVSPEASALLLGNAERLAEWGFVLEPWGTGVLVRAIPATLPTDELTQAIHEIAEKLAGRGGSDPLEW REAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQCVSPRTCPHGRPTMILMTPAQLERQFGRRV
Sequences:
>Translated_624_residues MPIRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCGIPADEIELAFARHATSKL QSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAELGVELRIAGGEVQSRLPCGCPVGTTITVRNLFYNTPVRREYL RSEATETGAISAIVQQYALAYPEVSFSLLIDGRMALQTSGDGDLRTVVVELYGLEVGRALLPVQAEAGVDETWVAVNGLI SPPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDVRVHPAAIDVNVHPTKSEVKFRYAAHVHS VLGRAIRDALLRGADIPTWDAPDPATAQRRFELRRLGQVATTPSSGWSVGASAWDRERSRWDVGSPATALNTPLPIVPEA PQSPPSPTLVPEPARQTPGEPITPAVPAAAPSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQH AVESQQLLIPQAVEVSPEASALLLGNAERLAEWGFVLEPWGTGVLVRAIPATLPTDELTQAIHEIAEKLAGRGGSDPLEW REAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQCVSPRTCPHGRPTMILMTPAQLERQFGRRV >Mature_623_residues PIRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCGIPADEIELAFARHATSKLQ SADDLWAIRTLGFRGEALPSIASVAQVICISRVADAELGVELRIAGGEVQSRLPCGCPVGTTITVRNLFYNTPVRREYLR SEATETGAISAIVQQYALAYPEVSFSLLIDGRMALQTSGDGDLRTVVVELYGLEVGRALLPVQAEAGVDETWVAVNGLIS PPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDVRVHPAAIDVNVHPTKSEVKFRYAAHVHSV LGRAIRDALLRGADIPTWDAPDPATAQRRFELRRLGQVATTPSSGWSVGASAWDRERSRWDVGSPATALNTPLPIVPEAP QSPPSPTLVPEPARQTPGEPITPAVPAAAPSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQHA VESQQLLIPQAVEVSPEASALLLGNAERLAEWGFVLEPWGTGVLVRAIPATLPTDELTQAIHEIAEKLAGRGGSDPLEWR EAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQCVSPRTCPHGRPTMILMTPAQLERQFGRRV
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=332, Percent_Identity=37.0481927710843, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI4505913, Length=331, Percent_Identity=29.3051359516616, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI310128478, Length=331, Percent_Identity=29.3051359516616, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI4505911, Length=311, Percent_Identity=27.3311897106109, Blast_Score=130, Evalue=5e-30, Organism=Homo sapiens, GI189458898, Length=311, Percent_Identity=27.3311897106109, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI189458896, Length=304, Percent_Identity=28.6184210526316, Blast_Score=119, Evalue=9e-27, Organism=Homo sapiens, GI310128480, Length=288, Percent_Identity=27.4305555555556, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI91992162, Length=342, Percent_Identity=27.7777777777778, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI91992160, Length=342, Percent_Identity=27.7777777777778, Blast_Score=106, Evalue=6e-23, Organism=Homo sapiens, GI263191589, Length=238, Percent_Identity=31.9327731092437, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1790612, Length=580, Percent_Identity=32.9310344827586, Blast_Score=224, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=34.0625, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17562796, Length=361, Percent_Identity=28.808864265928, Blast_Score=144, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6323819, Length=317, Percent_Identity=34.0694006309148, Blast_Score=167, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6325093, Length=723, Percent_Identity=21.8533886583679, Blast_Score=115, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6324247, Length=332, Percent_Identity=25.6024096385542, Blast_Score=111, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323063, Length=333, Percent_Identity=25.8258258258258, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI17136968, Length=337, Percent_Identity=35.3115727002967, Blast_Score=197, Evalue=3e-50, Organism=Drosophila melanogaster, GI17136970, Length=353, Percent_Identity=28.0453257790368, Blast_Score=137, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 67632; Mature: 67501
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCC CGIPADEIELAFARHATSKLQSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAELG CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC VELRIAGGEVQSRLPCGCPVGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALA EEEEEECCCHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH YPEVSFSLLIDGRMALQTSGDGDLRTVVVELYGLEVGRALLPVQAEAGVDETWVAVNGLI CCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCEECEECCCCCCCEEEEECCCC SPPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDVRVHPAAID CCHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEE VNVHPTKSEVKFRYAAHVHSVLGRAIRDALLRGADIPTWDAPDPATAQRRFELRRLGQVA EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TTPSSGWSVGASAWDRERSRWDVGSPATALNTPLPIVPEAPQSPPSPTLVPEPARQTPGE CCCCCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PITPAVPAAAPSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQH CCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHH AVESQQLLIPQAVEVSPEASALLLGNAERLAEWGFVLEPWGTGVLVRAIPATLPTDELTQ HHHHHHEECCHHHCCCCCCCEEEECCHHHHHHCCCEECCCCCCEEEEECCCCCCHHHHHH AIHEIAEKLAGRGGSDPLEWREAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQCVSPRT HHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC CPHGRPTMILMTPAQLERQFGRRV CCCCCCEEEEECHHHHHHHHCCCC >Mature Secondary Structure PIRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCC CGIPADEIELAFARHATSKLQSADDLWAIRTLGFRGEALPSIASVAQVICISRVADAELG CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC VELRIAGGEVQSRLPCGCPVGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALA EEEEEECCCHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH YPEVSFSLLIDGRMALQTSGDGDLRTVVVELYGLEVGRALLPVQAEAGVDETWVAVNGLI CCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHCCCEECEECCCCCCCEEEEECCCC SPPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDVRVHPAAID CCHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEE VNVHPTKSEVKFRYAAHVHSVLGRAIRDALLRGADIPTWDAPDPATAQRRFELRRLGQVA EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TTPSSGWSVGASAWDRERSRWDVGSPATALNTPLPIVPEAPQSPPSPTLVPEPARQTPGE CCCCCCCCCCCHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PITPAVPAAAPSALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQH CCCCCCCCCCCCCCCHHHHHHHCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHH AVESQQLLIPQAVEVSPEASALLLGNAERLAEWGFVLEPWGTGVLVRAIPATLPTDELTQ HHHHHHEECCHHHCCCCCCCEEEECCHHHHHHCCCEECCCCCCEEEEECCCCCCHHHHHH AIHEIAEKLAGRGGSDPLEWREAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQCVSPRT HHHHHHHHHHCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCC CPHGRPTMILMTPAQLERQFGRRV CCCCCCEEEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA