Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222524502

Identifier: 222524502

GI number: 222524502

Start: 1561447

End: 1561944

Strand: Direct

Name: 222524502

Synonym: Chy400_1226

Alternate gene names: NA

Gene position: 1561447-1561944 (Clockwise)

Preceding gene: 222524494

Following gene: 222524504

Centisome position: 29.63

GC content: 55.02

Gene sequence:

>498_bases
ATGAAACGAGTTGTGTGTCTGCTAAGTGAGTTACCATGTGCCTGTATGAACGAACCAATAGGACAACGGATTGCCCGCCT
CCGCAATGAGTTGGGCTGGACTCAGCAAGAGCTTGCCGAACGGCTCGCCATTTCGCGAGTAGCAGTATCGCATATCGAGT
TGGGGCTATCAGTGCCTGGAGAGCGTACCATTACGCTATTAGCCGGTTTATTTAAGCGCGAGCCGTTGCAGCTTGTTGCC
GGTACCGATTACCCACCAGCGCGGGCCGAGCGCTTACCGTTTGTAACCTGTCGCTATACTGAAGTCGAACTACAACTTGC
GCTGTTGGCCCGTGATTGTGAGTGGATTGCGGCAGTCGGGCCAATTGCGACCGGGCGAGCAACGGCCATCCTTGACGAAT
GGCGTATCCGGCTCGAACGTCTCACACAGGAGACAACCGACCGGCGCGAGCTAGACTTACTTGCCGCTGCTCGCCGCAAT
CTTGATCGATACTTATAA

Upstream 100 bases:

>100_bases
CGCACGCTTTGGAGCCATACTTTGTTATCCTCTCACGTTAGCAGCACAAAACCAGCACGAGCAAACGTTCTCGCACTGCG
ACAAACGGTGCTACTATACA

Downstream 100 bases:

>100_bases
CTCACCGCGAGCGGCTGCTACTGCCTTCTGCGCACCCTCAGCCAGCGTTGCCGCAGGGATCAACTTCGACTCGGCCAGCA
GTGCCCGTCCGGCTTCTTCA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKRVVCLLSELPCACMNEPIGQRIARLRNELGWTQQELAERLAISRVAVSHIELGLSVPGERTITLLAGLFKREPLQLVA
GTDYPPARAERLPFVTCRYTEVELQLALLARDCEWIAAVGPIATGRATAILDEWRIRLERLTQETTDRRELDLLAAARRN
LDRYL

Sequences:

>Translated_165_residues
MKRVVCLLSELPCACMNEPIGQRIARLRNELGWTQQELAERLAISRVAVSHIELGLSVPGERTITLLAGLFKREPLQLVA
GTDYPPARAERLPFVTCRYTEVELQLALLARDCEWIAAVGPIATGRATAILDEWRIRLERLTQETTDRRELDLLAAARRN
LDRYL
>Mature_165_residues
MKRVVCLLSELPCACMNEPIGQRIARLRNELGWTQQELAERLAISRVAVSHIELGLSVPGERTITLLAGLFKREPLQLVA
GTDYPPARAERLPFVTCRYTEVELQLALLARDCEWIAAVGPIATGRATAILDEWRIRLERLTQETTDRRELDLLAAARRN
LDRYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18690; Mature: 18690

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVVCLLSELPCACMNEPIGQRIARLRNELGWTQQELAERLAISRVAVSHIELGLSVPG
CCHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
ERTITLLAGLFKREPLQLVAGTDYPPARAERLPFVTCRYTEVELQLALLARDCEWIAAVG
HHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHC
PIATGRATAILDEWRIRLERLTQETTDRRELDLLAAARRNLDRYL
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRVVCLLSELPCACMNEPIGQRIARLRNELGWTQQELAERLAISRVAVSHIELGLSVPG
CCHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
ERTITLLAGLFKREPLQLVAGTDYPPARAERLPFVTCRYTEVELQLALLARDCEWIAAVG
HHHHHHHHHHHCCCCEEEEECCCCCCCHHCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHC
PIATGRATAILDEWRIRLERLTQETTDRRELDLLAAARRNLDRYL
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA