| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mhpC [C]
Identifier: 222524471
GI number: 222524471
Start: 1521920
End: 1522675
Strand: Direct
Name: mhpC [C]
Synonym: Chy400_1195
Alternate gene names: 222524471
Gene position: 1521920-1522675 (Clockwise)
Preceding gene: 222524467
Following gene: 222524474
Centisome position: 28.88
GC content: 60.05
Gene sequence:
>756_bases GTGTCAACAATTTCTACCCGTCATGGCCCACTGCACTATCTCACCGTTGGTCAGGGTGCACCGTTTGTACTGCTTCACGG CAACACCTATAGCGCGACCACCCAGGTGCGGCTGGCGCAACGGTTTGCCGATCAGTTTACAGTCTACTCGTTTGATCTGC TTGGTCATGGTGGTTCGGCGCGTCCGCCAGATCTCTTTACCACTCGCTACTTTCAAATGCAAGGCGAGGCGGTGGCCGAT GCGCTGGCCGGTCTGTTCCACACACCGGTACCGGTCTTCGGGATGAGTGCCGGTGGGATCAGTGCCTTGAATGCGGTCTG TATTCGCCCCGATCTGATCGCAGCTCTCATTCTTGACGGGGTGTTTGCCCGGGTAACCGCAGCCACCTATCAGGCGCATC GCCACGCCACAGCCAGTATGTCGCCGAGCTGGCACCGTTATATGGCAGGTCAGCACGGTGCCGACTGGTGGCCGATTCTC AATGCCGGCGTCGAGTCGGTGATCGAGCAACTGGCCGCCCAGGAAGCACTGGTCACACCGTGCCTTGACCAGATTCGGGT GCCGACCATTATTTTTCACGGTGGCAAAGACCCGTTCGTTCCCGACGAACAGGCGCGGGCGGTAGCTGCCGGCATTCGCG GTGCCCGCATTGTCTACGAACCAGAGGCCGGCCATCTGATTGCCTGGCGTAATCCTGATGCCTTCCGCGCCCGTGTTGGG CGGTTTCTGGTTGAAGCAGGTGTGGTAGCGGGGTGA
Upstream 100 bases:
>100_bases GAGCCACGGTTTATTCTGGAGATAAGCTGATACAATTAGTTGAGTAAATGTTAATATACTACGTTTAATCGTAATTTTGT AATTTTAGAGGTGAATTTCA
Downstream 100 bases:
>100_bases CGGCGGACAGGGTGAGCGCACCGCTACGTCTCCAGCATGTTCTCTGCACGCAGTGTGCACGTAACGCGCTGATCTGGTGT ACCCTGTTGCTTCTCATTTG
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: Alpha/Beta Fold Family Hydrolase
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSTISTRHGPLHYLTVGQGAPFVLLHGNTYSATTQVRLAQRFADQFTVYSFDLLGHGGSARPPDLFTTRYFQMQGEAVAD ALAGLFHTPVPVFGMSAGGISALNAVCIRPDLIAALILDGVFARVTAATYQAHRHATASMSPSWHRYMAGQHGADWWPIL NAGVESVIEQLAAQEALVTPCLDQIRVPTIIFHGGKDPFVPDEQARAVAAGIRGARIVYEPEAGHLIAWRNPDAFRARVG RFLVEAGVVAG
Sequences:
>Translated_251_residues MSTISTRHGPLHYLTVGQGAPFVLLHGNTYSATTQVRLAQRFADQFTVYSFDLLGHGGSARPPDLFTTRYFQMQGEAVAD ALAGLFHTPVPVFGMSAGGISALNAVCIRPDLIAALILDGVFARVTAATYQAHRHATASMSPSWHRYMAGQHGADWWPIL NAGVESVIEQLAAQEALVTPCLDQIRVPTIIFHGGKDPFVPDEQARAVAAGIRGARIVYEPEAGHLIAWRNPDAFRARVG RFLVEAGVVAG >Mature_250_residues STISTRHGPLHYLTVGQGAPFVLLHGNTYSATTQVRLAQRFADQFTVYSFDLLGHGGSARPPDLFTTRYFQMQGEAVADA LAGLFHTPVPVFGMSAGGISALNAVCIRPDLIAALILDGVFARVTAATYQAHRHATASMSPSWHRYMAGQHGADWWPILN AGVESVIEQLAAQEALVTPCLDQIRVPTIIFHGGKDPFVPDEQARAVAAGIRGARIVYEPEAGHLIAWRNPDAFRARVGR FLVEAGVVAG
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI221316588, Length=242, Percent_Identity=28.9256198347107, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.- [C]
Molecular weight: Translated: 27012; Mature: 26881
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTISTRHGPLHYLTVGQGAPFVLLHGNTYSATTQVRLAQRFADQFTVYSFDLLGHGGSA CCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCC RPPDLFTTRYFQMQGEAVADALAGLFHTPVPVFGMSAGGISALNAVCIRPDLIAALILDG CCCCCHHHHHHEECCHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHCCHHHHHHHHHHH VFARVTAATYQAHRHATASMSPSWHRYMAGQHGADWWPILNAGVESVIEQLAAQEALVTP HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLDQIRVPTIIFHGGKDPFVPDEQARAVAAGIRGARIVYEPEAGHLIAWRNPDAFRARVG HHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCCHHHHHHHH RFLVEAGVVAG HHHHHHCCCCC >Mature Secondary Structure STISTRHGPLHYLTVGQGAPFVLLHGNTYSATTQVRLAQRFADQFTVYSFDLLGHGGSA CCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCC RPPDLFTTRYFQMQGEAVADALAGLFHTPVPVFGMSAGGISALNAVCIRPDLIAALILDG CCCCCHHHHHHEECCHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHCCHHHHHHHHHHH VFARVTAATYQAHRHATASMSPSWHRYMAGQHGADWWPILNAGVESVIEQLAAQEALVTP HHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLDQIRVPTIIFHGGKDPFVPDEQARAVAAGIRGARIVYEPEAGHLIAWRNPDAFRARVG HHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCEEEECCCHHHHHHHH RFLVEAGVVAG HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA