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The map label for this gene is 222524439

Identifier: 222524439

GI number: 222524439

Start: 1475568

End: 1476833

Strand: Direct

Name: 222524439

Synonym: Chy400_1163

Alternate gene names: NA

Gene position: 1475568-1476833 (Clockwise)

Preceding gene: 222524438

Following gene: 222524442

Centisome position: 28.0

GC content: 60.27

Gene sequence:

>1266_bases
ATGGCCGTTCAAGTCTGGATTGGCGAGAAACCGGAACACCCCCAGGAACGCCGGGCGATCCTGGGGGTTGCCCAGGCACT
CGAAAAACTGGAGGGCCTGTTTCTGATTCTGGCCAATTTCAGCGTCAATGGGCGCAACATCGATCTGGTGATCATCAAAC
ACGATGCGATTGTCATCATCGAACTCAAGCATTGCGACGGTCGGGTCATCGGGAGTGTCAACGGCCCCTGGATCGTCGAA
GGGCGCAACGGCGAACAAAAACGGCTCAATCCCGGACGCAAAAATCCGTACAATCAGGTCATCTCCTACTTTCACGCGCT
AACCAATTTTCTCAACGAGCATCGGCGGGAGTTCCTCTCGGAACAAAAGGCAAACGATGTTGACTTTCGCACCTGCAAGC
GCCTGATCGTCATCGCGCCACGGATTGAAGAGGGTTCACAGCTCGATCTCGACTGGAAGGTGGAGGTGCGCGGGCTTGAT
GAGTTGCCTGCGTATATGATCACCGAGCGCTCTTCAGAGATTGAGCTGACCGAAGAGGAGATGCTGGCAATCCCGAAACT
CCTGCACTGTACGCCGTGGGCTGAACTCAACGAGGTGGTGCAAGAGGAGCGGGCGGCACCGACATCCGCACCGGCCCAAC
CATGGCTCGTGCGGCTCAGGCAGGCGCTCCAGACCACGACCGGTCGGCTGGCGGTGGTCTTCGCATCAATAGCGCTCTTT
CTGTTGCTCTTCTTGCTCTTCAGACCACCGGCTGCCATCCCGCGCCCCGACGCACCGCTCACGCTGATCGCCGGTACTCC
GGCTGATAGCGCCATTCTGAGTTTCAACACGACCACGAGCTTTTGCCGCTGGAACACCTACCAACTGGTGGGCAAGCGCT
GGGATAGCGCAGAACAGCGCTGGCAAAGCGTTGCAGTCGGCGAGGCAGCTACCGGCACCGCGCCCGACATCATTGTAGCG
TTAGAGCAGATTGATGCCTGTGGCGACCGGATCGAGCTGACCTGGAGCATCCAGAACAACACCACCCGCCCGGTGAGTCT
CCCCCTCCGCCACGACAATATCAAAATCAGCGACGGCCTGGGCAACGACTACCCGCTGGCCGACGGCGACTCGCGCCCGG
CCATCATCAGCGCGTCACCCGGCACCCGCCAGCGTGGGATTGCCGTCGTGCGCCGACCACTGGCCGCCAACGCCAGCACC
CTGCGCATCAACCTGGTCGAACAGCCCTTCGGGGAAGCGAGTTTCATCGTCGCACTTCAGCCGTAG

Upstream 100 bases:

>100_bases
GATGAAGCAGGCCGCGAAAGAGCTTGCCTTCGAGAAGGCGGCTGCATTACGCGACCAGATCGTTGAGTTGCGCAAAACAC
TGGCGCTGAGTGAGTGAAAA

Downstream 100 bases:

>100_bases
CGGGTGTTCGGTTGCGTAGATACACCACAGACACATCACCACAGGGGCGGGTTCAGAACCCGCCCCTACCCGAACGCCCT
CACCCCCGGCCCCTCTTCCG

Product: NERD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MAVQVWIGEKPEHPQERRAILGVAQALEKLEGLFLILANFSVNGRNIDLVIIKHDAIVIIELKHCDGRVIGSVNGPWIVE
GRNGEQKRLNPGRKNPYNQVISYFHALTNFLNEHRREFLSEQKANDVDFRTCKRLIVIAPRIEEGSQLDLDWKVEVRGLD
ELPAYMITERSSEIELTEEEMLAIPKLLHCTPWAELNEVVQEERAAPTSAPAQPWLVRLRQALQTTTGRLAVVFASIALF
LLLFLLFRPPAAIPRPDAPLTLIAGTPADSAILSFNTTTSFCRWNTYQLVGKRWDSAEQRWQSVAVGEAATGTAPDIIVA
LEQIDACGDRIELTWSIQNNTTRPVSLPLRHDNIKISDGLGNDYPLADGDSRPAIISASPGTRQRGIAVVRRPLAANAST
LRINLVEQPFGEASFIVALQP

Sequences:

>Translated_421_residues
MAVQVWIGEKPEHPQERRAILGVAQALEKLEGLFLILANFSVNGRNIDLVIIKHDAIVIIELKHCDGRVIGSVNGPWIVE
GRNGEQKRLNPGRKNPYNQVISYFHALTNFLNEHRREFLSEQKANDVDFRTCKRLIVIAPRIEEGSQLDLDWKVEVRGLD
ELPAYMITERSSEIELTEEEMLAIPKLLHCTPWAELNEVVQEERAAPTSAPAQPWLVRLRQALQTTTGRLAVVFASIALF
LLLFLLFRPPAAIPRPDAPLTLIAGTPADSAILSFNTTTSFCRWNTYQLVGKRWDSAEQRWQSVAVGEAATGTAPDIIVA
LEQIDACGDRIELTWSIQNNTTRPVSLPLRHDNIKISDGLGNDYPLADGDSRPAIISASPGTRQRGIAVVRRPLAANAST
LRINLVEQPFGEASFIVALQP
>Mature_420_residues
AVQVWIGEKPEHPQERRAILGVAQALEKLEGLFLILANFSVNGRNIDLVIIKHDAIVIIELKHCDGRVIGSVNGPWIVEG
RNGEQKRLNPGRKNPYNQVISYFHALTNFLNEHRREFLSEQKANDVDFRTCKRLIVIAPRIEEGSQLDLDWKVEVRGLDE
LPAYMITERSSEIELTEEEMLAIPKLLHCTPWAELNEVVQEERAAPTSAPAQPWLVRLRQALQTTTGRLAVVFASIALFL
LLFLLFRPPAAIPRPDAPLTLIAGTPADSAILSFNTTTSFCRWNTYQLVGKRWDSAEQRWQSVAVGEAATGTAPDIIVAL
EQIDACGDRIELTWSIQNNTTRPVSLPLRHDNIKISDGLGNDYPLADGDSRPAIISASPGTRQRGIAVVRRPLAANASTL
RINLVEQPFGEASFIVALQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46827; Mature: 46696

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQVWIGEKPEHPQERRAILGVAQALEKLEGLFLILANFSVNGRNIDLVIIKHDAIVII
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEECCEEEEE
ELKHCDGRVIGSVNGPWIVEGRNGEQKRLNPGRKNPYNQVISYFHALTNFLNEHRREFLS
EEECCCCEEEECCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQKANDVDFRTCKRLIVIAPRIEEGSQLDLDWKVEVRGLDELPAYMITERSSEIELTEEE
HHCCCCCCHHHHCEEEEEECCCCCCCEECEEEEEEECCCCCCCCEEEECCCCCCEECHHH
MLAIPKLLHCTPWAELNEVVQEERAAPTSAPAQPWLVRLRQALQTTTGRLAVVFASIALF
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLLFLLFRPPAAIPRPDAPLTLIAGTPADSAILSFNTTTSFCRWNTYQLVGKRWDSAEQR
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHH
WQSVAVGEAATGTAPDIIVALEQIDACGDRIELTWSIQNNTTRPVSLPLRHDNIKISDGL
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCEEEECCC
GNDYPLADGDSRPAIISASPGTRQRGIAVVRRPLAANASTLRINLVEQPFGEASFIVALQ
CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEC
P
C
>Mature Secondary Structure 
AVQVWIGEKPEHPQERRAILGVAQALEKLEGLFLILANFSVNGRNIDLVIIKHDAIVII
EEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEEECCEEEEE
ELKHCDGRVIGSVNGPWIVEGRNGEQKRLNPGRKNPYNQVISYFHALTNFLNEHRREFLS
EEECCCCEEEECCCCCEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQKANDVDFRTCKRLIVIAPRIEEGSQLDLDWKVEVRGLDELPAYMITERSSEIELTEEE
HHCCCCCCHHHHCEEEEEECCCCCCCEECEEEEEEECCCCCCCCEEEECCCCCCEECHHH
MLAIPKLLHCTPWAELNEVVQEERAAPTSAPAQPWLVRLRQALQTTTGRLAVVFASIALF
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLLFLLFRPPAAIPRPDAPLTLIAGTPADSAILSFNTTTSFCRWNTYQLVGKRWDSAEQR
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHHH
WQSVAVGEAATGTAPDIIVALEQIDACGDRIELTWSIQNNTTRPVSLPLRHDNIKISDGL
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCEEEECCC
GNDYPLADGDSRPAIISASPGTRQRGIAVVRRPLAANASTLRINLVEQPFGEASFIVALQ
CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA