| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524421
Identifier: 222524421
GI number: 222524421
Start: 1450340
End: 1451638
Strand: Reverse
Name: 222524421
Synonym: Chy400_1145
Alternate gene names: NA
Gene position: 1451638-1450340 (Counterclockwise)
Preceding gene: 222524422
Following gene: 222524416
Centisome position: 27.55
GC content: 55.89
Gene sequence:
>1299_bases ATGCTATCGTTTGATCGACGACGAATGGCGCTGATTGGTCTCCTGATTGCGCTCCTCATCGGTTTTCCACCAGTCACTGC ACAGGCCGGTTTTCGTTTGTACGGCGCCGGTGGCTGTGGTAATCTCGACGAAGCGTTGGCGCGTGCCCAACCAGGTGATG TGGTCGCAGCCATGATTGGCTTTCGCTCCAGTAATAGCATTGCCCCGATTACCCAATCGCTCGTCCTGGAAGGGGGCTGG GTTCCCAACTTCGATGACTCCTCAACGGCACGCTGTGAGGAAAGCGGCAACGACCAGCCGAACTCTTCGACCATGTACAG CCTTGGCTATACCCTTGACCCGGATCAAGGATCGGAACTCAGCCTTGGTTCGGGAAACCATATCTTGCCCTTCAATCTGA ATGGTGCGACGGTCGTGCTCAAGAATCTCGATCTGACGAACAGTGTCAATACTGTCGGTGGCGTCGGTATTCAGGGTACG CTGGCGAATGGTGCCCGGATGCGTATAGAGAATCTCGAATTCAACGACAACCTGGTGCAGGGAGGCGTAGCCAATGGCGC GGCTATCAGGCTGGAGCTAACCGGCAATTCGCATCTCACCATCATCAATAGTCGGTTTAATCGAAACCAGGCCGGGAGTG GCGGTGCGATTGAACTTGTGGTACGCGATGGCAGCACCGTTGTGATTGAGAACAGTTCGTTTGCTAACAATGAAGCTCTC AATGGAAGTGGTGGCGCGGTGCGCATCATCATGTATGCCGGTACCGTTGTTCTCCGCTCAAACAGCTTTACCGGTAATGT CGCCACCAATGGCAGCGGCGGTGCCATTCGTATCGAGCGCGCCGCTACTGCCACCGGGTCAACCGTTGTTTTGATCGACG GGAATCAATTCAGTGGCAACAGTGCTGCTTCGGCACCTGACAGCTCATTCAGTGGCGTGAGTGTTATGACACCGCGAGTA CGTGTACCGCTCACTCTGCGTCAGACGACTACGACCTATCGAGTACAGCCGCTGAATGTCACCATTAGCGATGCGCAATA CCTCTGCACGTTTACCACCAGCGGGTACACACCACAGCTTCCCGGACGCCACATTCACTTTTTCTTTAACACGGTCACCG AGAGCCAGGCCGGTGTACCGGCGAATCCGGCCAACTGGTTTGTCTACGGCAGTTCGGCACCATTCACCGGCTACAATATC AAAGATCGCCCGCCCGGTGCGACTGCCCTCTGTGCGCTGGTTGCCAATGCCGACCACACGGTGATTCCGGGTACCGGAGG GTGCATTCCACTACCGTAG
Upstream 100 bases:
>100_bases TATTCCTGAAATGTCTATTCCTGAAATGCTTTGATTCGCCCCTCATCTTCTTCATCTCACCCTCAGCGTATCAAGAGCAT TGCGAGGGGGAGGCACCTCT
Downstream 100 bases:
>100_bases ATCATATTCGGCACGACGCCTGGGTATATATGAGGATGAGCCGGGTACGTCTGCTGCGTTACGAGCAGATTGATCCGCCA CCAGCCACTTGAGGCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MLSFDRRRMALIGLLIALLIGFPPVTAQAGFRLYGAGGCGNLDEALARAQPGDVVAAMIGFRSSNSIAPITQSLVLEGGW VPNFDDSSTARCEESGNDQPNSSTMYSLGYTLDPDQGSELSLGSGNHILPFNLNGATVVLKNLDLTNSVNTVGGVGIQGT LANGARMRIENLEFNDNLVQGGVANGAAIRLELTGNSHLTIINSRFNRNQAGSGGAIELVVRDGSTVVIENSSFANNEAL NGSGGAVRIIMYAGTVVLRSNSFTGNVATNGSGGAIRIERAATATGSTVVLIDGNQFSGNSAASAPDSSFSGVSVMTPRV RVPLTLRQTTTTYRVQPLNVTISDAQYLCTFTTSGYTPQLPGRHIHFFFNTVTESQAGVPANPANWFVYGSSAPFTGYNI KDRPPGATALCALVANADHTVIPGTGGCIPLP
Sequences:
>Translated_432_residues MLSFDRRRMALIGLLIALLIGFPPVTAQAGFRLYGAGGCGNLDEALARAQPGDVVAAMIGFRSSNSIAPITQSLVLEGGW VPNFDDSSTARCEESGNDQPNSSTMYSLGYTLDPDQGSELSLGSGNHILPFNLNGATVVLKNLDLTNSVNTVGGVGIQGT LANGARMRIENLEFNDNLVQGGVANGAAIRLELTGNSHLTIINSRFNRNQAGSGGAIELVVRDGSTVVIENSSFANNEAL NGSGGAVRIIMYAGTVVLRSNSFTGNVATNGSGGAIRIERAATATGSTVVLIDGNQFSGNSAASAPDSSFSGVSVMTPRV RVPLTLRQTTTTYRVQPLNVTISDAQYLCTFTTSGYTPQLPGRHIHFFFNTVTESQAGVPANPANWFVYGSSAPFTGYNI KDRPPGATALCALVANADHTVIPGTGGCIPLP >Mature_432_residues MLSFDRRRMALIGLLIALLIGFPPVTAQAGFRLYGAGGCGNLDEALARAQPGDVVAAMIGFRSSNSIAPITQSLVLEGGW VPNFDDSSTARCEESGNDQPNSSTMYSLGYTLDPDQGSELSLGSGNHILPFNLNGATVVLKNLDLTNSVNTVGGVGIQGT LANGARMRIENLEFNDNLVQGGVANGAAIRLELTGNSHLTIINSRFNRNQAGSGGAIELVVRDGSTVVIENSSFANNEAL NGSGGAVRIIMYAGTVVLRSNSFTGNVATNGSGGAIRIERAATATGSTVVLIDGNQFSGNSAASAPDSSFSGVSVMTPRV RVPLTLRQTTTTYRVQPLNVTISDAQYLCTFTTSGYTPQLPGRHIHFFFNTVTESQAGVPANPANWFVYGSSAPFTGYNI KDRPPGATALCALVANADHTVIPGTGGCIPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44951; Mature: 44951
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFDRRRMALIGLLIALLIGFPPVTAQAGFRLYGAGGCGNLDEALARAQPGDVVAAMIG CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEE FRSSNSIAPITQSLVLEGGWVPNFDDSSTARCEESGNDQPNSSTMYSLGYTLDPDQGSEL ECCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECEEECCCCCCEE SLGSGNHILPFNLNGATVVLKNLDLTNSVNTVGGVGIQGTLANGARMRIENLEFNDNLVQ EECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEE GGVANGAAIRLELTGNSHLTIINSRFNRNQAGSGGAIELVVRDGSTVVIENSSFANNEAL CCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC NGSGGAVRIIMYAGTVVLRSNSFTGNVATNGSGGAIRIERAATATGSTVVLIDGNQFSGN CCCCCEEEEEEEECEEEEECCCCCCCEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCC SAASAPDSSFSGVSVMTPRVRVPLTLRQTTTTYRVQPLNVTISDAQYLCTFTTSGYTPQL CCCCCCCCCCCCEEEECCCEEEEEEEEECCEEEEEEEEEEEECCCEEEEEEECCCCCCCC PGRHIHFFFNTVTESQAGVPANPANWFVYGSSAPFTGYNIKDRPPGATALCALVANADHT CCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEEEEEEECCCCE VIPGTGGCIPLP EECCCCCEECCC >Mature Secondary Structure MLSFDRRRMALIGLLIALLIGFPPVTAQAGFRLYGAGGCGNLDEALARAQPGDVVAAMIG CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEE FRSSNSIAPITQSLVLEGGWVPNFDDSSTARCEESGNDQPNSSTMYSLGYTLDPDQGSEL ECCCCCCCCCCHHHEEECCCCCCCCCCCCCCHHHCCCCCCCCCEEEEECEEECCCCCCEE SLGSGNHILPFNLNGATVVLKNLDLTNSVNTVGGVGIQGTLANGARMRIENLEFNDNLVQ EECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEE GGVANGAAIRLELTGNSHLTIINSRFNRNQAGSGGAIELVVRDGSTVVIENSSFANNEAL CCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCC NGSGGAVRIIMYAGTVVLRSNSFTGNVATNGSGGAIRIERAATATGSTVVLIDGNQFSGN CCCCCEEEEEEEECEEEEECCCCCCCEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCC SAASAPDSSFSGVSVMTPRVRVPLTLRQTTTTYRVQPLNVTISDAQYLCTFTTSGYTPQL CCCCCCCCCCCCEEEECCCEEEEEEEEECCEEEEEEEEEEEECCCEEEEEEECCCCCCCC PGRHIHFFFNTVTESQAGVPANPANWFVYGSSAPFTGYNIKDRPPGATALCALVANADHT CCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEEEEEEECCCCE VIPGTGGCIPLP EECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA