| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524416
Identifier: 222524416
GI number: 222524416
Start: 1441634
End: 1443757
Strand: Reverse
Name: 222524416
Synonym: Chy400_1140
Alternate gene names: NA
Gene position: 1443757-1441634 (Counterclockwise)
Preceding gene: 222524421
Following gene: 222524414
Centisome position: 27.4
GC content: 56.03
Gene sequence:
>2124_bases ATGAAGAAGATAGTACCAACGGAGCGAGTACGGTGTCTACCCAACGACATCTACGTCGTCACGACCACTGCCGGCGATAT CCAGGTCAACAGTCCACCGGAGAGTCTGAAATTCCTGCTCGCGCACGGCTTAACGCCACCGCAATATGTTCTGCTACCGC CTGATGCTCCGACCGGGAGTGAACCGGGTTCGCATGGCTTTGTGCGACGCGGGATCAATTATGCCAGCGTCGAGTTTCTG ATCTATGCCAGTTTCTTCGGTCGACAACAGCGGATTACATTAATCACGCCCACGGAAGCCCAGGCTCAACGACTACGCAT CCTGTTACAAGAGACGATCAACGGCCCTTCAGCACCGGAAGACTGGCCGGGAAGCTGGTTGAAAGAGGAATGTGCGACGG TAGCTTTCTTTCCGCCACTTGGCCGCGCACCGACCGTTGACGATATGGTCACCATTGTGGCGCTGGAAACCGGTGGCGGC AACCTCGGCGAGGTACAGATCACGTATCACGACGATGCTTTTCATTTTACCGAACATGGGGTTGACATTGCACGCATTCC GGCGACGATTACCGGCATTGCCCAGCCACTGACGGTGGCCCCACCACGTCCGCTCGTGCGCCAGATGATCACACTCCAAT TCATCGGGGGGAGTGATGGTTTTGATCCGACCGGCATCACAACCTGCTTTCTCGCCTATTTTTGCAACAATCAACCCCTC TTGTTTGATGCCGCGGCCTATCTGAATGTGCGACTGGCCCATCTTGGTCTCTCTCCACGGCAAATCGACCTGGTAGTCAT CTCGCACCTCCATGAAGACCACATTGCCGGTCTACCTGAATTGATTCTCACTGGTGGTAAACGGGTGCAACTGGTGACGG CCCAGCCGATCTATCGCTCGTTGCTGCGCGTTTTGGGTGTCATGCTCGATCTTCCCCCGGCAACAGTTGCCGAACTGTTT GACTTCTACCCGCTTGATCCTGGGCAACCACTCGACCTGCATGGCTATCACTTTACGGCAACCTATGCAGTTCATTCAGT GCCCACCATTGCGGTGCGGGTGAACGGTGTTGGTTATTCAGGTGATATGCGGTACGACGAAGCATGGCTGGAACACCTGC ATCAAACCGGACACCTGAGCAGCGAACGGCTTGACGAACTCCGTCAGTTTGCCGATGGGGTCGAAATTCTGGTGCACGAT ATGGGTGGTGGTGCCATTCATACCACTCCGACTGAACACCTGCTCCGTACCCTTAGCACACGCAGTCGGCGACTGGTACT GGCTCACACCAGCCGTCAGGACTTCACGGTAACCGACGAACTGGCCGACCGGGTGGAAGTTGCCGGGAGCGGTCATATTG TCGGGATAGGTGAAATTGTCTACGACGACGAACAACGTCAACGCTTTGAAACCTTCACCATCTGCCCACTTTTTGCCCGC CTCCCGGTCGCAGAGCGGGTAAACCTGGCAAACCAATGTACTATCGTCTCGTATCCGGCAGGACAGGTGATTGCCCGTGA AGGTGAAGCTTCTGACGGTTGCGCATACGTGATTCACCGCGGAGTCGTGGAGATTATTGTCGGCAACGAATCGGTACGCT TCCTGGGGCGTGGCAATAGTCTGGGTGAACGCGGTGCTTTGATTGGCGAGCCTCGCACCAGTACTATGGTGGCTCATAGT GACGTGCAACTCTTACAAATCACTCCAGATCTGTTTACCAGAGTGGCCGGGCAACTGGGATTGGCAGAGGCTTTTGCCCG CGCTGACTGGCTCTGGCAACAATCAACACTGGGGCAATTGCCCTGGGCTACGCTACTCGATCTGGCACTGGATTTCACGC CGCATACGGTCGCAGCCGGTACGGTACTCTGCCGGCGCGGCGAGATGAGCACAACCGGCTACTTGCTGGTACACGGTCGT GTCCACTATAGCGCCATGCGTGACGGTGAGAGCGAACGAAGTGGTGACTGTTTTGGGATGCGATCTGCCCTGCGTGGCGA ACCCTATCGCCTGACCGTGCGCGCACTTAGCGACTGCGTGGTATGGTCGATAGAGGCTTCTTCCCTCCAGCGCTTCTATC TGACGTATCCCGATTTATTTCTCCACTTGCGGGTGATTGGATAA
Upstream 100 bases:
>100_bases ATAGCATGCCTGGTCGAGGGGCTTGCATTGATCGCTACAATACGTTTATCGAGACGTTTATACAGGTATAGCATTCAGTA CCAGTCGGCAGGAGGAGCGT
Downstream 100 bases:
>100_bases CGGCCGGCCAATGGCATCCCGAGAGGTATGCCATATCTGGCAAACTCGACCGGTGATGATCGTGTCTGTCGTGGATACGG TGATCATCTGGCGGGGCAGC
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MKKIVPTERVRCLPNDIYVVTTTAGDIQVNSPPESLKFLLAHGLTPPQYVLLPPDAPTGSEPGSHGFVRRGINYASVEFL IYASFFGRQQRITLITPTEAQAQRLRILLQETINGPSAPEDWPGSWLKEECATVAFFPPLGRAPTVDDMVTIVALETGGG NLGEVQITYHDDAFHFTEHGVDIARIPATITGIAQPLTVAPPRPLVRQMITLQFIGGSDGFDPTGITTCFLAYFCNNQPL LFDAAAYLNVRLAHLGLSPRQIDLVVISHLHEDHIAGLPELILTGGKRVQLVTAQPIYRSLLRVLGVMLDLPPATVAELF DFYPLDPGQPLDLHGYHFTATYAVHSVPTIAVRVNGVGYSGDMRYDEAWLEHLHQTGHLSSERLDELRQFADGVEILVHD MGGGAIHTTPTEHLLRTLSTRSRRLVLAHTSRQDFTVTDELADRVEVAGSGHIVGIGEIVYDDEQRQRFETFTICPLFAR LPVAERVNLANQCTIVSYPAGQVIAREGEASDGCAYVIHRGVVEIIVGNESVRFLGRGNSLGERGALIGEPRTSTMVAHS DVQLLQITPDLFTRVAGQLGLAEAFARADWLWQQSTLGQLPWATLLDLALDFTPHTVAAGTVLCRRGEMSTTGYLLVHGR VHYSAMRDGESERSGDCFGMRSALRGEPYRLTVRALSDCVVWSIEASSLQRFYLTYPDLFLHLRVIG
Sequences:
>Translated_707_residues MKKIVPTERVRCLPNDIYVVTTTAGDIQVNSPPESLKFLLAHGLTPPQYVLLPPDAPTGSEPGSHGFVRRGINYASVEFL IYASFFGRQQRITLITPTEAQAQRLRILLQETINGPSAPEDWPGSWLKEECATVAFFPPLGRAPTVDDMVTIVALETGGG NLGEVQITYHDDAFHFTEHGVDIARIPATITGIAQPLTVAPPRPLVRQMITLQFIGGSDGFDPTGITTCFLAYFCNNQPL LFDAAAYLNVRLAHLGLSPRQIDLVVISHLHEDHIAGLPELILTGGKRVQLVTAQPIYRSLLRVLGVMLDLPPATVAELF DFYPLDPGQPLDLHGYHFTATYAVHSVPTIAVRVNGVGYSGDMRYDEAWLEHLHQTGHLSSERLDELRQFADGVEILVHD MGGGAIHTTPTEHLLRTLSTRSRRLVLAHTSRQDFTVTDELADRVEVAGSGHIVGIGEIVYDDEQRQRFETFTICPLFAR LPVAERVNLANQCTIVSYPAGQVIAREGEASDGCAYVIHRGVVEIIVGNESVRFLGRGNSLGERGALIGEPRTSTMVAHS DVQLLQITPDLFTRVAGQLGLAEAFARADWLWQQSTLGQLPWATLLDLALDFTPHTVAAGTVLCRRGEMSTTGYLLVHGR VHYSAMRDGESERSGDCFGMRSALRGEPYRLTVRALSDCVVWSIEASSLQRFYLTYPDLFLHLRVIG >Mature_707_residues MKKIVPTERVRCLPNDIYVVTTTAGDIQVNSPPESLKFLLAHGLTPPQYVLLPPDAPTGSEPGSHGFVRRGINYASVEFL IYASFFGRQQRITLITPTEAQAQRLRILLQETINGPSAPEDWPGSWLKEECATVAFFPPLGRAPTVDDMVTIVALETGGG NLGEVQITYHDDAFHFTEHGVDIARIPATITGIAQPLTVAPPRPLVRQMITLQFIGGSDGFDPTGITTCFLAYFCNNQPL LFDAAAYLNVRLAHLGLSPRQIDLVVISHLHEDHIAGLPELILTGGKRVQLVTAQPIYRSLLRVLGVMLDLPPATVAELF DFYPLDPGQPLDLHGYHFTATYAVHSVPTIAVRVNGVGYSGDMRYDEAWLEHLHQTGHLSSERLDELRQFADGVEILVHD MGGGAIHTTPTEHLLRTLSTRSRRLVLAHTSRQDFTVTDELADRVEVAGSGHIVGIGEIVYDDEQRQRFETFTICPLFAR LPVAERVNLANQCTIVSYPAGQVIAREGEASDGCAYVIHRGVVEIIVGNESVRFLGRGNSLGERGALIGEPRTSTMVAHS DVQLLQITPDLFTRVAGQLGLAEAFARADWLWQQSTLGQLPWATLLDLALDFTPHTVAAGTVLCRRGEMSTTGYLLVHGR VHYSAMRDGESERSGDCFGMRSALRGEPYRLTVRALSDCVVWSIEASSLQRFYLTYPDLFLHLRVIG
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322156, Length=232, Percent_Identity=26.2931034482759, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77758; Mature: 77758
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIVPTERVRCLPNDIYVVTTTAGDIQVNSPPESLKFLLAHGLTPPQYVLLPPDAPTGS CCCCCCCHHHEECCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCC EPGSHGFVRRGINYASVEFLIYASFFGRQQRITLITPTEAQAQRLRILLQETINGPSAPE CCCCCCHHHCCCCCCCEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCC DWPGSWLKEECATVAFFPPLGRAPTVDDMVTIVALETGGGNLGEVQITYHDDAFHFTEHG CCCCHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCEEHHHCC VDIARIPATITGIAQPLTVAPPRPLVRQMITLQFIGGSDGFDPTGITTCFLAYFCNNQPL CEEEECCCHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCE LFDAAAYLNVRLAHLGLSPRQIDLVVISHLHEDHIAGLPELILTGGKRVQLVTAQPIYRS EEEHHHHHEEEEEECCCCCCEEEEEEEECCCHHHHCCCCHHHHCCCCEEEEEECCHHHHH LLRVLGVMLDLPPATVAELFDFYPLDPGQPLDLHGYHFTATYAVHSVPTIAVRVNGVGYS HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCC GDMRYDEAWLEHLHQTGHLSSERLDELRQFADGVEILVHDMGGGAIHTTPTEHLLRTLST CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHC RSRRLVLAHTSRQDFTVTDELADRVEVAGSGHIVGIGEIVYDDEQRQRFETFTICPLFAR CCCEEEEEECCCCCCEEHHHHHHHHEECCCCCEEEECCEEECCHHHHHHHEEEEEHHHHH LPVAERVNLANQCTIVSYPAGQVIAREGEASDGCAYVIHRGVVEIIVGNESVRFLGRGNS CCHHHHCCCCCCEEEEECCCCCEEEECCCCCCCHHHEECCCEEEEEECCCCEEEEECCCC LGERGALIGEPRTSTMVAHSDVQLLQITPDLFTRVAGQLGLAEAFARADWLWQQSTLGQL CCCCCCEECCCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PWATLLDLALDFTPHTVAAGTVLCRRGEMSTTGYLLVHGRVHYSAMRDGESERSGDCFGM CHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCEEEEEECEEEEEHHCCCCCCCCCCHHHH RSALRGEPYRLTVRALSDCVVWSIEASSLQRFYLTYPDLFLHLRVIG HHHHCCCCEEEEEEECCCEEEEEEEHHHCEEEEEECCCEEEEEEEEC >Mature Secondary Structure MKKIVPTERVRCLPNDIYVVTTTAGDIQVNSPPESLKFLLAHGLTPPQYVLLPPDAPTGS CCCCCCCHHHEECCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCC EPGSHGFVRRGINYASVEFLIYASFFGRQQRITLITPTEAQAQRLRILLQETINGPSAPE CCCCCCHHHCCCCCCCEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCC DWPGSWLKEECATVAFFPPLGRAPTVDDMVTIVALETGGGNLGEVQITYHDDAFHFTEHG CCCCHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCEEHHHCC VDIARIPATITGIAQPLTVAPPRPLVRQMITLQFIGGSDGFDPTGITTCFLAYFCNNQPL CEEEECCCHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCE LFDAAAYLNVRLAHLGLSPRQIDLVVISHLHEDHIAGLPELILTGGKRVQLVTAQPIYRS EEEHHHHHEEEEEECCCCCCEEEEEEEECCCHHHHCCCCHHHHCCCCEEEEEECCHHHHH LLRVLGVMLDLPPATVAELFDFYPLDPGQPLDLHGYHFTATYAVHSVPTIAVRVNGVGYS HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCC GDMRYDEAWLEHLHQTGHLSSERLDELRQFADGVEILVHDMGGGAIHTTPTEHLLRTLST CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHC RSRRLVLAHTSRQDFTVTDELADRVEVAGSGHIVGIGEIVYDDEQRQRFETFTICPLFAR CCCEEEEEECCCCCCEEHHHHHHHHEECCCCCEEEECCEEECCHHHHHHHEEEEEHHHHH LPVAERVNLANQCTIVSYPAGQVIAREGEASDGCAYVIHRGVVEIIVGNESVRFLGRGNS CCHHHHCCCCCCEEEEECCCCCEEEECCCCCCCHHHEECCCEEEEEECCCCEEEEECCCC LGERGALIGEPRTSTMVAHSDVQLLQITPDLFTRVAGQLGLAEAFARADWLWQQSTLGQL CCCCCCEECCCCCCEEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PWATLLDLALDFTPHTVAAGTVLCRRGEMSTTGYLLVHGRVHYSAMRDGESERSGDCFGM CHHHHHHHHHCCCCCHHHHHHEEEECCCCCCCEEEEEECEEEEEHHCCCCCCCCCCHHHH RSALRGEPYRLTVRALSDCVVWSIEASSLQRFYLTYPDLFLHLRVIG HHHHCCCCEEEEEEECCCEEEEEEEHHHCEEEEEECCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA