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The map label for this gene is oppC [H]

Identifier: 222524402

GI number: 222524402

Start: 1424310

End: 1425287

Strand: Direct

Name: oppC [H]

Synonym: Chy400_1126

Alternate gene names: 222524402

Gene position: 1424310-1425287 (Clockwise)

Preceding gene: 222524401

Following gene: 222524405

Centisome position: 27.03

GC content: 55.73

Gene sequence:

>978_bases
GTGACTTCATCGGCCAGACCACTGACAAATCCTATCGACCTTCAGAACTTAAATACGAAACCGCGTAGCTTGTGGTCAGA
TGCACTACGCCGGCTGCGCCGTAATCGGGCCGCAATGGTAGGGTTGCTGGTTATTGTGCTGTATGTGATTGTTGCAATTG
CCGCACCGTGGCTGGCACCCTACAACCCTGTTCAGCAAATCCCGAACAACAGTTTACGTCCACCGGCCTGGGTAACCGAT
AATCCGGCCCGGATGGGGGTGCCGGAGCATCTGCTGGGCACCGATACCCTGGGCCGCGATGTGCTATCGCGCTTAATGTA
TGCGATCCGGGTCTCGCTGATTGTCGGGATTGTGCCACAATTTGCCATTCTGCTGATTGGTGTCACCATCGGCTTAATAT
CGGGCTTTGCCGGCGGTTGGCTCGATAATCTGTTAATGCGGTTTACCGAGATTGTAGCCGCCTTCCCGGATTTGCTGTTC
ATCATCGCGTTATCAACCGCATTTCGCGAAACGTGGCTGGGCCGTACCTTTAATGGCCTGTTGCTGATTTTCATTGCGGT
GTCGCTGGTCAGTTGGACCGGCATTGCCCGGCTGGTACGCGGTCAGGTGTTGTCGTTGAAGGAGAAGGAGTTTGTAGAGG
CGGCCCGCACCATCGGCGTGCCTACGCTGGCCATCCTCTGGCGGCATATTTTGCCCAACACTCTGGCTCCGATCATTGTG
TCCACGTCGTTTAGCATTCCGGCGTTGATCAGCGCCGAAGCTGTACTGACTATTCTCGGTGTCGGGATGCGCCCCTCGCT
CGATCCCGATAATCCGTTCCCTACCAGTCTGGGTGTGATGCTGACTGAAGGCTACAACAATCTATCATCCGGGCCGTGGT
TGCTCAGCTTTCCGGTGATTTTGATCGCCGGTCTGATGCTGTCGTTCACCTTCCTCGGCGATGGATTGCGTGATGCGCTC
GATCCGCGTGAACGGTAA

Upstream 100 bases:

>100_bases
CGCTCATCTATGTCTTTTTCCTGGGCATTGCCAATTTACTGGTCGATATTGCTTACGGTATTCTTGATCCACGTATTACC
TACAAGTAGTGAGGAACAGT

Downstream 100 bases:

>100_bases
GAGAGCAGGTTCCCTCGCCGTGGGTGGCAGAAGCGTAGCAGCAGCATTTCCGCCCCGCACGCAATGCTGCACATTTCGGA
GAGGATACCGTTGCCAGATG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTSSARPLTNPIDLQNLNTKPRSLWSDALRRLRRNRAAMVGLLVIVLYVIVAIAAPWLAPYNPVQQIPNNSLRPPAWVTD
NPARMGVPEHLLGTDTLGRDVLSRLMYAIRVSLIVGIVPQFAILLIGVTIGLISGFAGGWLDNLLMRFTEIVAAFPDLLF
IIALSTAFRETWLGRTFNGLLLIFIAVSLVSWTGIARLVRGQVLSLKEKEFVEAARTIGVPTLAILWRHILPNTLAPIIV
STSFSIPALISAEAVLTILGVGMRPSLDPDNPFPTSLGVMLTEGYNNLSSGPWLLSFPVILIAGLMLSFTFLGDGLRDAL
DPRER

Sequences:

>Translated_325_residues
MTSSARPLTNPIDLQNLNTKPRSLWSDALRRLRRNRAAMVGLLVIVLYVIVAIAAPWLAPYNPVQQIPNNSLRPPAWVTD
NPARMGVPEHLLGTDTLGRDVLSRLMYAIRVSLIVGIVPQFAILLIGVTIGLISGFAGGWLDNLLMRFTEIVAAFPDLLF
IIALSTAFRETWLGRTFNGLLLIFIAVSLVSWTGIARLVRGQVLSLKEKEFVEAARTIGVPTLAILWRHILPNTLAPIIV
STSFSIPALISAEAVLTILGVGMRPSLDPDNPFPTSLGVMLTEGYNNLSSGPWLLSFPVILIAGLMLSFTFLGDGLRDAL
DPRER
>Mature_324_residues
TSSARPLTNPIDLQNLNTKPRSLWSDALRRLRRNRAAMVGLLVIVLYVIVAIAAPWLAPYNPVQQIPNNSLRPPAWVTDN
PARMGVPEHLLGTDTLGRDVLSRLMYAIRVSLIVGIVPQFAILLIGVTIGLISGFAGGWLDNLLMRFTEIVAAFPDLLFI
IALSTAFRETWLGRTFNGLLLIFIAVSLVSWTGIARLVRGQVLSLKEKEFVEAARTIGVPTLAILWRHILPNTLAPIIVS
TSFSIPALISAEAVLTILGVGMRPSLDPDNPFPTSLGVMLTEGYNNLSSGPWLLSFPVILIAGLMLSFTFLGDGLRDALD
PRER

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=311, Percent_Identity=39.5498392282958, Blast_Score=197, Evalue=7e-52,
Organism=Escherichia coli, GI1787054, Length=320, Percent_Identity=36.25, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1789964, Length=296, Percent_Identity=38.5135135135135, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1787760, Length=282, Percent_Identity=31.9148936170213, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1788505, Length=285, Percent_Identity=30.5263157894737, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789889, Length=271, Percent_Identity=29.8892988929889, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1787549, Length=311, Percent_Identity=29.903536977492, Blast_Score=101, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35519; Mature: 35387

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCHHHHHCCCCCC
>Mature Secondary Structure 
TSSARPLTNPIDLQNLNTKPRSLWSDALRRLRRNRAAMVGLLVIVLYVIVAIAAPWLAP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC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HHHHHHHHHHHHCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]