| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is prsA [H]
Identifier: 222524398
GI number: 222524398
Start: 1418311
End: 1419783
Strand: Direct
Name: prsA [H]
Synonym: Chy400_1122
Alternate gene names: 222524398
Gene position: 1418311-1419783 (Clockwise)
Preceding gene: 222524397
Following gene: 222524399
Centisome position: 26.92
GC content: 57.98
Gene sequence:
>1473_bases ATGGAAGAAGAGCGCCGTCAGCGCCTGATTATTATCGTAACAGCGAGTGCGCTGGTCATCGCTCTGCTCGCCGTTGCGAG CGGATTGATCTACGAGCAGCTCTGGATACCCAGCCGACCGGTCGCCCAGGTTGGCTCAGTTACGTTAACCCGTAGTGATT ACTGGCGTGAACAGCGCATCGCATACGCCCGGCAGATTATCCAGAATTTTCAGTTGCTTGATCTCTTTGGTAACAATCCC CAGATTGCGCAGCAGTTCCAGGGCCGCAGTATCGTGATCGATCAGCAGATCCGCGCGTTGCGCCGGGCTGAAGTTGATCA GCAAGTGGTGTCGGAATGGATTGATCGCCAGATCAAGCAGCGGGCAGCCGGGGAATTCGGTATTACTATTAATGATGATG AGGTCATTCAGAATATCGTTGCCGATCTTGGCTTCATCTTCATTCCACCACTACCCGAACCGACACCGACGCCCGATTCT AATGTCACCCCAGAACCGACGGTCGATCCGGCGGCAACGGCGACACCAGAACCAACCGCAACTCCATCGCCAACCCCTGG TGGTCCAACCCCGACCCCAGAGCCGTCACCGACACCGGTGCCTACCTTCACCCCAGAACCGACGCCGCTACCGGCTGAGG CACGGGTGCAGTTTGATCAGATTATCGATGAGGTGTTTCGCCGCTACGAACTCGAACTGATCGTCACCGAACGTCAGCCA GAGTTAAGCAAAGACGAATTCCGGCAGGCGTTGCTCGATCAGTACCGGGAGCGGTTGCTTAACGAGCAGATTCAGGCCCG GCTGGTACCCGAAGATGGCTTCACCTACAAGACAGAGGCAGAACGGGTTAGTGCACGCCAGATCCTGGTTGCCGTTACCC CCCCGGCTGAGGCGACTCCAGAGCAGATTGAAGCAGCGTTTGCAGCGGCTTTACCTGCGGCACAAGAGATTGTTGCGCAG CTTCGGAATGGTGCCGATTTTGCTACACTGGCCGCCGAGCGCTCTGACGATATTGGATCGCGTGAGAATGGCGGTGATAT TGGTTCGTTCGACCGGAATGGCTTTGCCGATAATGGTGCAACCTATCCGCCGGAGCTGGTAGCGGCTGCCTTTAGCCTGC CGGTCAATCAGGTCAGCGATCCGATCCGCACCCAGTTTGGCTGGCATATCCTGGAAATCACCGATCAAACGATCCCCTCC CAGGAAGAACAACTTAGCCAGGCCCGCACCGAGGCGTTTGACCGCTGGATCGCTGAACAGCGGGCAGCCGCCGATGTCCG TCGTTTCCCCGAACCAACACCAACACCGACGCTGGCGCCGACCGAACCGGTACCAACACCGGTACCCACGTATCTGCCAG GCCCACCGACGCCATTCCCAACGCCAACGCTGGCGCCGACGGTCGAGATCACCGCAGAACCCACGGCAGAAGTAACGCCA ACACCAACGTCGACTGCAACCACAACACCGTAA
Upstream 100 bases:
>100_bases TGATATTCCGTTTTAGCCTATGTCACAAACACCCAAACCGCCACGGAGCGCACCGTCATCGGCGCCAACCCCTGTGCCGC GGCGTCCATCACGTCGCCGC
Downstream 100 bases:
>100_bases CGCTCACACGTGCCGGAGCGCCTGGCTCCGGCACGCAAATGACCTATGCAACGCTGGCCACCAATTCCATCCTCAAGAGT CTGGATCAGCCTCGCGCTCG
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MEEERRQRLIIIVTASALVIALLAVASGLIYEQLWIPSRPVAQVGSVTLTRSDYWREQRIAYARQIIQNFQLLDLFGNNP QIAQQFQGRSIVIDQQIRALRRAEVDQQVVSEWIDRQIKQRAAGEFGITINDDEVIQNIVADLGFIFIPPLPEPTPTPDS NVTPEPTVDPAATATPEPTATPSPTPGGPTPTPEPSPTPVPTFTPEPTPLPAEARVQFDQIIDEVFRRYELELIVTERQP ELSKDEFRQALLDQYRERLLNEQIQARLVPEDGFTYKTEAERVSARQILVAVTPPAEATPEQIEAAFAAALPAAQEIVAQ LRNGADFATLAAERSDDIGSRENGGDIGSFDRNGFADNGATYPPELVAAAFSLPVNQVSDPIRTQFGWHILEITDQTIPS QEEQLSQARTEAFDRWIAEQRAAADVRRFPEPTPTPTLAPTEPVPTPVPTYLPGPPTPFPTPTLAPTVEITAEPTAEVTP TPTSTATTTP
Sequences:
>Translated_490_residues MEEERRQRLIIIVTASALVIALLAVASGLIYEQLWIPSRPVAQVGSVTLTRSDYWREQRIAYARQIIQNFQLLDLFGNNP QIAQQFQGRSIVIDQQIRALRRAEVDQQVVSEWIDRQIKQRAAGEFGITINDDEVIQNIVADLGFIFIPPLPEPTPTPDS NVTPEPTVDPAATATPEPTATPSPTPGGPTPTPEPSPTPVPTFTPEPTPLPAEARVQFDQIIDEVFRRYELELIVTERQP ELSKDEFRQALLDQYRERLLNEQIQARLVPEDGFTYKTEAERVSARQILVAVTPPAEATPEQIEAAFAAALPAAQEIVAQ LRNGADFATLAAERSDDIGSRENGGDIGSFDRNGFADNGATYPPELVAAAFSLPVNQVSDPIRTQFGWHILEITDQTIPS QEEQLSQARTEAFDRWIAEQRAAADVRRFPEPTPTPTLAPTEPVPTPVPTYLPGPPTPFPTPTLAPTVEITAEPTAEVTP TPTSTATTTP >Mature_490_residues MEEERRQRLIIIVTASALVIALLAVASGLIYEQLWIPSRPVAQVGSVTLTRSDYWREQRIAYARQIIQNFQLLDLFGNNP QIAQQFQGRSIVIDQQIRALRRAEVDQQVVSEWIDRQIKQRAAGEFGITINDDEVIQNIVADLGFIFIPPLPEPTPTPDS NVTPEPTVDPAATATPEPTATPSPTPGGPTPTPEPSPTPVPTFTPEPTPLPAEARVQFDQIIDEVFRRYELELIVTERQP ELSKDEFRQALLDQYRERLLNEQIQARLVPEDGFTYKTEAERVSARQILVAVTPPAEATPEQIEAAFAAALPAAQEIVAQ LRNGADFATLAAERSDDIGSRENGGDIGSFDRNGFADNGATYPPELVAAAFSLPVNQVSDPIRTQFGWHILEITDQTIPS QEEQLSQARTEAFDRWIAEQRAAADVRRFPEPTPTPTLAPTEPVPTPVPTYLPGPPTPFPTPTLAPTVEITAEPTAEVTP TPTSTATTTP
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 53873; Mature: 53873
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEERRQRLIIIVTASALVIALLAVASGLIYEQLWIPSRPVAQVGSVTLTRSDYWREQRI CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEHHHHHHHHHH AYARQIIQNFQLLDLFGNNPQIAQQFQGRSIVIDQQIRALRRAEVDQQVVSEWIDRQIKQ HHHHHHHHCCEEEECCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAGEFGITINDDEVIQNIVADLGFIFIPPLPEPTPTPDSNVTPEPTVDPAATATPEPTA HHCCCCCEEECHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPSPTPGGPTPTPEPSPTPVPTFTPEPTPLPAEARVQFDQIIDEVFRRYELELIVTERQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCC ELSKDEFRQALLDQYRERLLNEQIQARLVPEDGFTYKTEAERVSARQILVAVTPPAEATP CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCHHHHHCEEEEEEEECCCCCCCH EQIEAAFAAALPAAQEIVAQLRNGADFATLAAERSDDIGSRENGGDIGSFDRNGFADNGA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TYPPELVAAAFSLPVNQVSDPIRTQFGWHILEITDQTIPSQEEQLSQARTEAFDRWIAEQ CCCHHHHHHHHHCCHHHHCCHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH RAAADVRRFPEPTPTPTLAPTEPVPTPVPTYLPGPPTPFPTPTLAPTVEITAEPTAEVTP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC TPTSTATTTP CCCCCCCCCC >Mature Secondary Structure MEEERRQRLIIIVTASALVIALLAVASGLIYEQLWIPSRPVAQVGSVTLTRSDYWREQRI CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEHHHHHHHHHH AYARQIIQNFQLLDLFGNNPQIAQQFQGRSIVIDQQIRALRRAEVDQQVVSEWIDRQIKQ HHHHHHHHCCEEEECCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH RAAGEFGITINDDEVIQNIVADLGFIFIPPLPEPTPTPDSNVTPEPTVDPAATATPEPTA HHCCCCCEEECHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPSPTPGGPTPTPEPSPTPVPTFTPEPTPLPAEARVQFDQIIDEVFRRYELELIVTERQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCC ELSKDEFRQALLDQYRERLLNEQIQARLVPEDGFTYKTEAERVSARQILVAVTPPAEATP CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCHHHHHCEEEEEEEECCCCCCCH EQIEAAFAAALPAAQEIVAQLRNGADFATLAAERSDDIGSRENGGDIGSFDRNGFADNGA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TYPPELVAAAFSLPVNQVSDPIRTQFGWHILEITDQTIPSQEEQLSQARTEAFDRWIAEQ CCCHHHHHHHHHCCHHHHCCHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH RAAADVRRFPEPTPTPTLAPTEPVPTPVPTYLPGPPTPFPTPTLAPTVEITAEPTAEVTP HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC TPTSTATTTP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]