| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524393
Identifier: 222524393
GI number: 222524393
Start: 1413997
End: 1415238
Strand: Direct
Name: 222524393
Synonym: Chy400_1117
Alternate gene names: NA
Gene position: 1413997-1415238 (Clockwise)
Preceding gene: 222524391
Following gene: 222524394
Centisome position: 26.84
GC content: 57.09
Gene sequence:
>1242_bases ATGACCGTCATCCTGTTTGAAGATGAACTCTGGCGCCATTTTGCTACGCTTGTTCAGGCCCGTCCGGTCTTTGAACTTCG CTGTGGGGCATTTTCAACCCGTGAACGGGTTGCCGCCATTCTTGACCAACCGGCTTACGGTCTCTGTCGTGCCCACCTGA TGCCCCACTTTGGCCCTGCCGGTGGACTGGCCGAATTGCTGGCCCGAAGTGATCCGGTCATCTTCGTGAATGGTCGGGCC CTCAATCTGGAGTGGTTGCCGGCACTTGTCTGTGAGCCGATCAACACTGCCTACATTGCCAGTGAAACGCTCCTCGGTGC TCGCGTATCGCCGGCTCTGGCCAGTGCAATCATCTATTATCTTCGTGAGCAGCAGGCTGAAGCCGCACGTGACGAGTTGC TGCGCTTTGCCCGGATGCGCGAGTTGCAACTCACTGCACCACTGCTGAGCTATCCCTGGGATCTCATCACTCAGGCCGGC GAACAGCTCATTCGTGATGAACCATTGCTGGCCCGTCGGTTACCGCTGTTGACAACCGATGCACCTCACGTCATCGCCCA TGGCAAGCGGGTCTACGTCGATCCGACGGCGCAACTGGCCGGGCCAATCGTGTTTGATAGTCGCGACGGGCCGGTCTTCG TCGAGGCAGCGCAGATCGAGCCATTCAGTTACATTCAGGGGCCGGCCTACATTGGCCCAGGCACCCTGATTGCCAGTGCT CGTATCCGTGCCGAAACCTGTATCGGGCCGGTGTGTCGGGTTGGCGGTGAGGTGGAGGCGTCGATCATTCACGGCTATTC CAACAAACATCACGATGGCTTTCTCGGTCATAGCTGGCTAGGGGAATGGGTGAATATCGGGGCAATGACGACCAATTCCG ATTTGAAAAACAACTATGGTTCGGTGCGCGTGCTCCTCGAAGGCATCGGCCAGATCGATACCGGTATTCTAAAGCTGGGC TGCTTTCTGGCCGATCACGTGAAGCTGGGGATCGGTCTCCATCTGACCGGTGGAACGATGATTGGTACCGGATCGAATGT CTTCGGTATGCATAGTGCGCCAAAAAACGTTCCCCATTTCACCTGGGGCGGCGAGGTCTTTCGCGAGTACCGCATTGATA CTATGATCAGCGTAGCTCGTATCGTAATGGCACGGCGGAAACGCGAGCTGACGCCCAGTTACGAGCAGGTGCTGCGCAAG GCTTTTGAGATAACGCAACCAAGTCGTGATGGTCTGGGATAG
Upstream 100 bases:
>100_bases TTCTAGCTTCGTTCTATTCAGTTCCTTGCCAACAATGTATTCTATGCTATGCTTTGAGTGAGCAGTATCACCACACGTAT AGCCATGGTCGCAAAACCTT
Downstream 100 bases:
>100_bases ACAATGACGTTCCGCGCCTTACCCAGTGTTGATAGACTCATCCGCGCCGTCCGCAGCGACGGGGCCGATATGCCGCACGA ACTGGTGCGTGAGGCTGCCC
Product: hypothetical protein
Products: diphosphate; dTDPglucose
Alternate protein names: Glucose-1-Phosphate Thymidylyltransferase; Sugar Phospate Transferase; Sugar Phosphate Nucleotydyl Transferase; Sugar-Phosphate Nucleotydyltransferase; Transferase Hexapeptide Repeat Containing Protein; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; UDP-N-Acetylglucosamine Diphosphorylase; Transferase Hexapeptide Repeat; Acetyltransferase; N-Acetylglucosamine-1-Phosphate Uridyltransferase; Glucose-1-Phosphate Thymidylyltransferase-Like Protein; Sugar-1-Phosphate Guanyl Transferase; Hexapeptide Transferase Family Protein; Hexapeptide Repeat-Containing Protein; Translation Initiation Factor EIF2B Subunit
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTVILFEDELWRHFATLVQARPVFELRCGAFSTRERVAAILDQPAYGLCRAHLMPHFGPAGGLAELLARSDPVIFVNGRA LNLEWLPALVCEPINTAYIASETLLGARVSPALASAIIYYLREQQAEAARDELLRFARMRELQLTAPLLSYPWDLITQAG EQLIRDEPLLARRLPLLTTDAPHVIAHGKRVYVDPTAQLAGPIVFDSRDGPVFVEAAQIEPFSYIQGPAYIGPGTLIASA RIRAETCIGPVCRVGGEVEASIIHGYSNKHHDGFLGHSWLGEWVNIGAMTTNSDLKNNYGSVRVLLEGIGQIDTGILKLG CFLADHVKLGIGLHLTGGTMIGTGSNVFGMHSAPKNVPHFTWGGEVFREYRIDTMISVARIVMARRKRELTPSYEQVLRK AFEITQPSRDGLG
Sequences:
>Translated_413_residues MTVILFEDELWRHFATLVQARPVFELRCGAFSTRERVAAILDQPAYGLCRAHLMPHFGPAGGLAELLARSDPVIFVNGRA LNLEWLPALVCEPINTAYIASETLLGARVSPALASAIIYYLREQQAEAARDELLRFARMRELQLTAPLLSYPWDLITQAG EQLIRDEPLLARRLPLLTTDAPHVIAHGKRVYVDPTAQLAGPIVFDSRDGPVFVEAAQIEPFSYIQGPAYIGPGTLIASA RIRAETCIGPVCRVGGEVEASIIHGYSNKHHDGFLGHSWLGEWVNIGAMTTNSDLKNNYGSVRVLLEGIGQIDTGILKLG CFLADHVKLGIGLHLTGGTMIGTGSNVFGMHSAPKNVPHFTWGGEVFREYRIDTMISVARIVMARRKRELTPSYEQVLRK AFEITQPSRDGLG >Mature_412_residues TVILFEDELWRHFATLVQARPVFELRCGAFSTRERVAAILDQPAYGLCRAHLMPHFGPAGGLAELLARSDPVIFVNGRAL NLEWLPALVCEPINTAYIASETLLGARVSPALASAIIYYLREQQAEAARDELLRFARMRELQLTAPLLSYPWDLITQAGE QLIRDEPLLARRLPLLTTDAPHVIAHGKRVYVDPTAQLAGPIVFDSRDGPVFVEAAQIEPFSYIQGPAYIGPGTLIASAR IRAETCIGPVCRVGGEVEASIIHGYSNKHHDGFLGHSWLGEWVNIGAMTTNSDLKNNYGSVRVLLEGIGQIDTGILKLGC FLADHVKLGIGLHLTGGTMIGTGSNVFGMHSAPKNVPHFTWGGEVFREYRIDTMISVARIVMARRKRELTPSYEQVLRKA FEITQPSRDGLG
Specific function: Unknown
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.24
Molecular weight: Translated: 45412; Mature: 45281
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVILFEDELWRHFATLVQARPVFELRCGAFSTRERVAAILDQPAYGLCRAHLMPHFGPA CEEEEECHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC GGLAELLARSDPVIFVNGRALNLEWLPALVCEPINTAYIASETLLGARVSPALASAIIYY CHHHHHHHCCCCEEEECCCEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH LREQQAEAARDELLRFARMRELQLTAPLLSYPWDLITQAGEQLIRDEPLLARRLPLLTTD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCEECC APHVIAHGKRVYVDPTAQLAGPIVFDSRDGPVFVEAAQIEPFSYIQGPAYIGPGTLIASA CCHHHCCCCEEEECCHHHHCCCEEEECCCCCEEEEEECCCCHHHHCCCCEECCCCEEEHH RIRAETCIGPVCRVGGEVEASIIHGYSNKHHDGFLGHSWLGEWVNIGAMTTNSDLKNNYG HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCHHHCCCC SVRVLLEGIGQIDTGILKLGCFLADHVKLGIGLHLTGGTMIGTGSNVFGMHSAPKNVPHF HHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEECCEEEECCCCEEECCCCCCCCCCC TWGGEVFREYRIDTMISVARIVMARRKRELTPSYEQVLRKAFEITQPSRDGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TVILFEDELWRHFATLVQARPVFELRCGAFSTRERVAAILDQPAYGLCRAHLMPHFGPA EEEEECHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCC GGLAELLARSDPVIFVNGRALNLEWLPALVCEPINTAYIASETLLGARVSPALASAIIYY CHHHHHHHCCCCEEEECCCEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH LREQQAEAARDELLRFARMRELQLTAPLLSYPWDLITQAGEQLIRDEPLLARRLPLLTTD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCHHHHCCCCEECC APHVIAHGKRVYVDPTAQLAGPIVFDSRDGPVFVEAAQIEPFSYIQGPAYIGPGTLIASA CCHHHCCCCEEEECCHHHHCCCEEEECCCCCEEEEEECCCCHHHHCCCCEECCCCEEEHH RIRAETCIGPVCRVGGEVEASIIHGYSNKHHDGFLGHSWLGEWVNIGAMTTNSDLKNNYG HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCHHHCCCC SVRVLLEGIGQIDTGILKLGCFLADHVKLGIGLHLTGGTMIGTGSNVFGMHSAPKNVPHF HHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEEEEECCEEEECCCCEEECCCCCCCCCCC TWGGEVFREYRIDTMISVARIVMARRKRELTPSYEQVLRKAFEITQPSRDGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dTTP; alpha-D-glucose 1-phosphate
Specific reaction: dTTP + alpha-D-glucose 1-phosphate = diphosphate + dTDP-glucose
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA