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The map label for this gene is dcd

Identifier: 222524358

GI number: 222524358

Start: 1374997

End: 1375557

Strand: Reverse

Name: dcd

Synonym: Chy400_1081

Alternate gene names: 222524358

Gene position: 1375557-1374997 (Counterclockwise)

Preceding gene: 222524359

Following gene: 222524354

Centisome position: 26.11

GC content: 55.08

Gene sequence:

>561_bases
ATGCCAATTAAATCAGATCGCTGGATTCGCCGTATGGCACTCGAACACGGCATGATTGAGCCGTTCGTTGATCACCAGGT
ACGCCGGGGGGTCATCTCGTATGGTCTGACCTCGTATGGTTACGACATGCGCGTCACCGACCACTTCAAAGTCTTCACCA
ATGTCTACAACGCCCTTGTCGATCCGAAGCAATTTGATCCGCGCTCCTTTGTTGATATTCGTGCCGATTACGTCGATATT
CCACCGAACTCGTTTGCGCTGGCGCAATCGCTGGAGTATTTTCGCATTCCCCGCACGGTGAGTTGTATCGTGATCGGCAA
ATCGTCGTATGCCCGCTGCGGCATCATCATCAACGTTACCCCGCTCGAACCGGAATGGGAAGGCCATGTCACGATTGAAA
TTAGCAACACGACCCCGCTCCCGGCGCGCATCTACGCGCACGAGGGCATTGGGCAGGTCTTGTTCCTGGAGAGTGACGAG
CCGTGCGAGGTGTCGTATGCCGACAAGAAGGGTAAATATCAGGGACAGACGGGGATCGTGCTGCCGCGGATCGATCCGTA
A

Upstream 100 bases:

>100_bases
AGCGGCGAGCAGTACCTGAATAAAAATCGAGCTGTAATGTTCTTTTCAGGCAGAGATTGTATGCTGGAAAGCAGCATTCA
CCAACCGTAAGGAGTCACCG

Downstream 100 bases:

>100_bases
AGCCGCGAGACGTTGTGGCAACCACAACGTCTCGCTCGCAACCACAATCACACTTCCATAACCATCGGCAGTACCATTGG
CCGCCGCCGCGTCTCGCGGT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPIKSDRWIRRMALEHGMIEPFVDHQVRRGVISYGLTSYGYDMRVTDHFKVFTNVYNALVDPKQFDPRSFVDIRADYVDI
PPNSFALAQSLEYFRIPRTVSCIVIGKSSYARCGIIINVTPLEPEWEGHVTIEISNTTPLPARIYAHEGIGQVLFLESDE
PCEVSYADKKGKYQGQTGIVLPRIDP

Sequences:

>Translated_186_residues
MPIKSDRWIRRMALEHGMIEPFVDHQVRRGVISYGLTSYGYDMRVTDHFKVFTNVYNALVDPKQFDPRSFVDIRADYVDI
PPNSFALAQSLEYFRIPRTVSCIVIGKSSYARCGIIINVTPLEPEWEGHVTIEISNTTPLPARIYAHEGIGQVLFLESDE
PCEVSYADKKGKYQGQTGIVLPRIDP
>Mature_185_residues
PIKSDRWIRRMALEHGMIEPFVDHQVRRGVISYGLTSYGYDMRVTDHFKVFTNVYNALVDPKQFDPRSFVDIRADYVDIP
PNSFALAQSLEYFRIPRTVSCIVIGKSSYARCGIIINVTPLEPEWEGHVTIEISNTTPLPARIYAHEGIGQVLFLESDEP
CEVSYADKKGKYQGQTGIVLPRIDP

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_CHLAA (A9WHV4)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001634611.1
- ProteinModelPortal:   A9WHV4
- SMR:   A9WHV4
- GeneID:   5828318
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_0990
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- ProtClustDB:   PRK00416
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21181; Mature: 21050

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKSDRWIRRMALEHGMIEPFVDHQVRRGVISYGLTSYGYDMRVTDHFKVFTNVYNALV
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCEEEECHHHHHHHHHHHHHC
DPKQFDPRSFVDIRADYVDIPPNSFALAQSLEYFRIPRTVSCIVIGKSSYARCGIIINVT
CCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEE
PLEPEWEGHVTIEISNTTPLPARIYAHEGIGQVLFLESDEPCEVSYADKKGKYQGQTGIV
CCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCCEE
LPRIDP
EECCCC
>Mature Secondary Structure 
PIKSDRWIRRMALEHGMIEPFVDHQVRRGVISYGLTSYGYDMRVTDHFKVFTNVYNALV
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHCCCEEEECHHHHHHHHHHHHHC
DPKQFDPRSFVDIRADYVDIPPNSFALAQSLEYFRIPRTVSCIVIGKSSYARCGIIINVT
CCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEE
PLEPEWEGHVTIEISNTTPLPARIYAHEGIGQVLFLESDEPCEVSYADKKGKYQGQTGIV
CCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCCCCCCCCCCCEE
LPRIDP
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA